BLASTX nr result

ID: Bupleurum21_contig00000670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000670
         (1791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleop...   581   e-163
ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop...   580   e-163
ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop...   577   e-162
ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|2...   575   e-161
ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleop...   549   e-154

>ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis vinifera]
            gi|296088998|emb|CBI38701.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  581 bits (1498), Expect = e-163
 Identities = 284/423 (67%), Positives = 343/423 (81%), Gaps = 1/423 (0%)
 Frame = +1

Query: 202  SGKEPSPEDDRSHSNHNADESVEDEVKPSAPVDEEEEQKRAELLSLPPHGSEVFIGALPR 381
            SG++   E D S     A+E ++DE  P+A VDE+E++K A+LL+LPPHGSE+FIG LPR
Sbjct: 54   SGEDQLLEVDESRI---ANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPR 110

Query: 382  DITEEDLRDLCESVGEIVEIRLMKNKDTGEGKGFAFVSFETKDVAQKAIEQLHNKEYKGR 561
            +  EEDLRDLCE +GE +E+RLMKN+D+GE KG+AF+SF+TK++AQKAIE+LH+KE+KGR
Sbjct: 111  EALEEDLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFKGR 170

Query: 562  TLRCSLSETKYRLFIGNVPKNLNDDEFKKFIDEVGPGAELIELIKDPQNPSRNRGFAFVE 741
            T+RCSLSE+K+RLFIGNVPK+  DDEF+K I+++GPGAE IELIKDPQNPSRNRGFAFVE
Sbjct: 171  TIRCSLSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVE 230

Query: 742  YFNNSCADYSRQKMSSANFKLEGNTPTVTWADPKSTPDHSSSSQVKALYVKNIPENTPSE 921
            Y+NN+CADY RQKMSS+NFKL+GNTPTV+WADPKST DHS+++QVKALYVKNIPENT +E
Sbjct: 231  YYNNACADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTE 290

Query: 922  QLKELFERHGEVKKVVMPPAKVG-GKRDFGFIHYAERSSALKAANDTEKYEINGQVLEVV 1098
            QLKELF+RHGEV KVVMPPAK G  KRDFGFIH+AERSSALKA  DTEK+EI+GQ L+V 
Sbjct: 291  QLKELFQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVS 350

Query: 1099 LAKPQGDRKSDVTNLHSTGLHPNYIPNPGYGGFPANXXXXXXXXXXXXXXXQQPMIYGRG 1278
            LAKPQ D+K +  + +S+G HPN++P+PGYGGF  N               QQP+IYGRG
Sbjct: 351  LAKPQSDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRG 409

Query: 1279 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPQMRPRRNDRANXXXXXXXXXXXXASDDANR 1458
            PMPAGM MVPMVLPDGRIGYVLQQPGV MP  RPRRN+R+N             S D NR
Sbjct: 410  PMPAGMHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGRGGSSGSGDDNR 469

Query: 1459 GGR 1467
              R
Sbjct: 470  SRR 472


>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
            max]
          Length = 483

 Score =  580 bits (1494), Expect = e-163
 Identities = 285/423 (67%), Positives = 340/423 (80%), Gaps = 2/423 (0%)
 Frame = +1

Query: 205  GKEPSPEDDRSHSNHNADESVEDEVKPSAPVDEEEEQKRAELLSLPPHGSEVFIGALPRD 384
            GK+  PE ++S     A E  +DE K S  +DE+E++K  ELL+LPPHGSEVFIG LPRD
Sbjct: 61   GKDQLPEAEKSDI---ATEFGDDEQKLSF-IDEDEKEKHDELLALPPHGSEVFIGGLPRD 116

Query: 385  ITEEDLRDLCESVGEIVEIRLMKNKDTGEGKGFAFVSFETKDVAQKAIEQLHNKEYKGRT 564
            + E+DLR+LCE +G+I+E+RLMK++DTGE KG+AFV+F+TK+VAQKAIE++H+KE+KG+T
Sbjct: 117  VCEDDLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFKGKT 176

Query: 565  LRCSLSETKYRLFIGNVPKNLNDDEFKKFIDEVGPGAELIELIKDPQNPSRNRGFAFVEY 744
            LRCSLSETK+RLFIGNVPK   +D+F+K ++ VGPG E IELIKDPQNPSRNRGFAFV Y
Sbjct: 177  LRCSLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLY 236

Query: 745  FNNSCADYSRQKMSSANFKLEGNTPTVTWADPKSTPDHSSSSQVKALYVKNIPENTPSEQ 924
            +NN+CADYSRQKM+S++FKL+GNTPTVTWADPK++PDHS+SSQVKALYVKNIPEN  +EQ
Sbjct: 237  YNNACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQ 296

Query: 925  LKELFERHGEVKKVVMPPAKVGGKRDFGFIHYAERSSALKAANDTEKYEINGQVLEVVLA 1104
            LKELF RHGEV KVVMPP K GGKRDFGFIHYAERSSALKA  DTEKYEI+GQ+LEVVLA
Sbjct: 297  LKELFRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLA 356

Query: 1105 KPQGDRKSDVTNLHSTGLHPNYIPNPGYGGFPANXXXXXXXXXXXXXXXQQPMIYGRGPM 1284
            KPQ D+K D    ++ GLHPN++P+P YG F  N               QQPMIYGRGPM
Sbjct: 357  KPQADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPM 416

Query: 1285 PAGMQMVPMVLPDGRIGYVLQQPGVPMPQMRPRRNDRANXXXXXXXXXXXXAS--DDANR 1458
            PAGMQMVPM+LPDGRIGYVLQQPGV +P  RPRRNDR+N            AS  D+ NR
Sbjct: 417  PAGMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNR 476

Query: 1459 GGR 1467
              R
Sbjct: 477  SRR 479


>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
            max]
          Length = 483

 Score =  577 bits (1487), Expect = e-162
 Identities = 285/423 (67%), Positives = 338/423 (79%), Gaps = 2/423 (0%)
 Frame = +1

Query: 205  GKEPSPEDDRSHSNHNADESVEDEVKPSAPVDEEEEQKRAELLSLPPHGSEVFIGALPRD 384
            GK+  PE ++S     A E  +DE K S  +DE+E++K  ELL+LPPHGSEVFIG LPRD
Sbjct: 61   GKDQLPEAEKSDI---ATEFGDDEQKLSF-IDEDEKEKHDELLALPPHGSEVFIGGLPRD 116

Query: 385  ITEEDLRDLCESVGEIVEIRLMKNKDTGEGKGFAFVSFETKDVAQKAIEQLHNKEYKGRT 564
            + E+DLR+LCE +G+I+E+RLMK++DTGE KG+AFV+F+TK+VAQKAIE++H+KE+KG+T
Sbjct: 117  VCEDDLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSKEFKGKT 176

Query: 565  LRCSLSETKYRLFIGNVPKNLNDDEFKKFIDEVGPGAELIELIKDPQNPSRNRGFAFVEY 744
            LRCSLSETK+RLFIGNVPK   +D+F+K ++ VGPG E IELIKDPQNPSRNRGFAFV Y
Sbjct: 177  LRCSLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLY 236

Query: 745  FNNSCADYSRQKMSSANFKLEGNTPTVTWADPKSTPDHSSSSQVKALYVKNIPENTPSEQ 924
            +NN+CADYSRQKM+S++FKL+GNTPTVTWADPK++PDHS+SSQVKALYVKNIPEN  +EQ
Sbjct: 237  YNNACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQ 296

Query: 925  LKELFERHGEVKKVVMPPAKVGGKRDFGFIHYAERSSALKAANDTEKYEINGQVLEVVLA 1104
            LKELF RHGEV KVVMPP K GGKRDFGFIHYAERSSALKA  DTEKYEI+GQ+LEVVLA
Sbjct: 297  LKELFRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLA 356

Query: 1105 KPQGDRKSDVTNLHSTGLHPNYIPNPGYGGFPANXXXXXXXXXXXXXXXQQPMIYGRGPM 1284
            KPQ D+K D    ++ GLHPN+IP+P YG F  N               QQPMIYGRGPM
Sbjct: 357  KPQADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPM 416

Query: 1285 PAGMQMVPMVLPDGRIGYVLQQPGVPMPQMRPRRNDRANXXXXXXXXXXXXAS--DDANR 1458
            PAGMQMVPMVLPDGRIGYVLQQPGV +P  RPRR DR+N             S  D+ NR
Sbjct: 417  PAGMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSNGPSGQPGRGGGGGSGNDEGNR 476

Query: 1459 GGR 1467
              R
Sbjct: 477  SRR 479


>ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|222861667|gb|EEE99209.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score =  575 bits (1482), Expect = e-161
 Identities = 290/424 (68%), Positives = 339/424 (79%), Gaps = 2/424 (0%)
 Frame = +1

Query: 202  SGKEPSPEDDRSHSNHNADESVEDEVKPSAPVDEEEEQKRAELLSLPPHGSEVFIGALPR 381
            S K+ SPE DR  ++    E  EDE KP+A V+EEE++K A+LL+LPPHGSEVFIG LPR
Sbjct: 59   SQKDQSPEADRIVAD---TEPAEDEQKPTASVNEEEKEKHAQLLALPPHGSEVFIGGLPR 115

Query: 382  DITEEDLRDLCESVGEIVEIRLMKNKDTGEGKGFAFVSFETKDVAQKAIEQLHNKEYKGR 561
            D+ E++LRDLCE +GEI EIRLMK+KD+GE KGFAFV+F++K+VA+KAIE+LH+K+YKG+
Sbjct: 116  DVIEDELRDLCEPIGEIFEIRLMKDKDSGESKGFAFVAFKSKEVARKAIEELHSKDYKGK 175

Query: 562  TLRCSLSETKYRLFIGNVPKNLNDDEFKKFIDEVGPGAELIELIKDPQNPSRNRGFAFVE 741
            TLRCS+SETK RLFIGNVPKNL +DEF+K I+EVGPG E+IELIKDPQ P+RNRGFAF+ 
Sbjct: 176  TLRCSISETKNRLFIGNVPKNLTEDEFRKIIEEVGPGVEVIELIKDPQTPTRNRGFAFIL 235

Query: 742  YFNNSCADYSRQKMSSANFKLEGNTPTVTWADPKST-PDHS-SSSQVKALYVKNIPENTP 915
            Y+NN+CADYSRQKM +ANFKL+G+TPTV+WADPK T PDHS +SSQVKALYVKNIPENT 
Sbjct: 236  YYNNACADYSRQKMLNANFKLDGHTPTVSWADPKGTPPDHSAASSQVKALYVKNIPENTS 295

Query: 916  SEQLKELFERHGEVKKVVMPPAKVGGKRDFGFIHYAERSSALKAANDTEKYEINGQVLEV 1095
            +EQLK LF+RHG+V KVVMPP K  GKRDFGFIHYAERSSALKA  D EKYEI+GQVLEV
Sbjct: 296  TEQLKGLFQRHGDVTKVVMPPGK-AGKRDFGFIHYAERSSALKAVRDAEKYEIDGQVLEV 354

Query: 1096 VLAKPQGDRKSDVTNLHSTGLHPNYIPNPGYGGFPANXXXXXXXXXXXXXXXQQPMIYGR 1275
            VLAKPQ D+K D    ++ G+HPN +P P Y GF  N               QQP+IYGR
Sbjct: 355  VLAKPQADKKPDAAYPYNAGVHPNPVPLPAYSGFAGNPYGSLGTGFGVASSFQQPVIYGR 414

Query: 1276 GPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPQMRPRRNDRANXXXXXXXXXXXXASDDAN 1455
            GPMPAGM MVPMVLPDGRIGYVLQQPGV MPQ RPRR DR N            +SDD N
Sbjct: 415  GPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRRVDRNN--GPSGPGRAGNSSDDGN 472

Query: 1456 RGGR 1467
            RG R
Sbjct: 473  RGRR 476


>ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
            sativus] gi|449477982|ref|XP_004155183.1| PREDICTED:
            heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
            sativus]
          Length = 481

 Score =  549 bits (1415), Expect = e-154
 Identities = 274/416 (65%), Positives = 332/416 (79%), Gaps = 2/416 (0%)
 Frame = +1

Query: 226  DDRSHSNHNADESVEDEVKPSAPVDEEEEQKRAELLSLPPHGSEVFIGALPRDITEEDLR 405
            DDR   N+ + ES+E+  K S+ +DE++ +K A+LL+LPPHGSEVFIG L RD+ EEDLR
Sbjct: 66   DDR---NNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDLR 122

Query: 406  DLCESVGEIVEIRLMKNKDTGEGKGFAFVSFETKDVAQKAIEQLHNKEYKGRTLRCSLSE 585
            D+CES+GEI EIR++K+KD+GE KG+AF++F+TK+ AQKAIE LH KE KG+T+RCSLS+
Sbjct: 123  DMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSLSD 182

Query: 586  TKYRLFIGNVPKNLNDDEFKKFIDEVGPGAELIELIKDPQNPSRNRGFAFVEYFNNSCAD 765
            +K+RLFIGNVPK+  DDEF++ I+ VGPG E IELIKDPQNP+RNRGFAFV Y+NN+CAD
Sbjct: 183  SKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACAD 242

Query: 766  YSRQKMSSANFKLEGNTPTVTWADPKSTPDHSSSSQVKALYVKNIPENTPSEQLKELFER 945
            YSRQKMSSANFKL+GN+PTV+WADPKS PD+S+++QVKALYVKNIPENT +EQLKELF++
Sbjct: 243  YSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELFQQ 302

Query: 946  HGEVKKVVMPPAKVG-GKRDFGFIHYAERSSALKAANDTEKYEINGQVLEVVLAKPQGDR 1122
            HGEV KV MPP K G  KRDF FIHYAERSSALKA  +TEKYEI GQ+LEVVLAKPQ D+
Sbjct: 303  HGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDK 362

Query: 1123 KSDVTNLHSTGLHPNYIPNPGYGGFPANXXXXXXXXXXXXXXXQQPMIYGRGPMPAGMQM 1302
            KSD    H +G +PN++ + GYGG+  N                QPMIYGRGPMPAGMQM
Sbjct: 363  KSDGAYSHISGSYPNHLLHGGYGGYGGN-PYGSLGGYGVTAGFHQPMIYGRGPMPAGMQM 421

Query: 1303 VPMVLPDGRIGYVLQQPGVPMPQMRPRRNDRAN-XXXXXXXXXXXXASDDANRGGR 1467
            VPMVLPDGRIGYVLQQPGVPMP  R RR++R+N             +SDD NRG R
Sbjct: 422  VPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 477


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