BLASTX nr result

ID: Bupleurum21_contig00000653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000653
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150201.1| PREDICTED: uncharacterized protein LOC101222...   216   1e-54
ref|XP_002874126.1| hypothetical protein ARALYDRAFT_489200 [Arab...   204   6e-51
ref|XP_002267971.1| PREDICTED: uncharacterized protein LOC100243...   203   1e-50
emb|CAN78564.1| hypothetical protein VITISV_010403 [Vitis vinifera]   203   1e-50
ref|NP_197730.1| uncharacterized protein [Arabidopsis thaliana] ...   201   7e-50

>ref|XP_004150201.1| PREDICTED: uncharacterized protein LOC101222590 [Cucumis sativus]
           gi|449508108|ref|XP_004163221.1| PREDICTED:
           uncharacterized LOC101222590 [Cucumis sativus]
          Length = 699

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/163 (64%), Positives = 130/163 (79%)
 Frame = +2

Query: 5   PKPLPFLSPLANSVISSCSKILQKPTEELQHCFETEHPDIIKESLIYARNLLEFCSYQAL 184
           PK +P LSP ANSV++ CSKILQ PTEE+Q  F++E P I KE   Y+R+LLEF SYQ L
Sbjct: 49  PKSIPQLSPFANSVVARCSKILQMPTEEMQQLFDSELPGINKEPETYSRSLLEFISYQTL 108

Query: 185 NIVTRRPDYLADKNFRRLTFDMMLAWEGPSAESAQPNIVDNNKTVGPEAFARIAPACTAI 364
             ++RRPDYL+DK FRRL +DMMLAWE P +ES      D+ KTVGPEAFARIAPAC A+
Sbjct: 109 YSMSRRPDYLSDKEFRRLAYDMMLAWECPGSESEPLPQFDDKKTVGPEAFARIAPACIAL 168

Query: 365 ADVITVHNLFDALSTSSGHELHFPVYNKYLRSLEKVVKSAANA 493
           AD+ITVHNLFD+L++SSGH LHF V++KY+RSL+KV+K+  NA
Sbjct: 169 ADIITVHNLFDSLTSSSGHRLHFLVFDKYIRSLDKVIKATKNA 211


>ref|XP_002874126.1| hypothetical protein ARALYDRAFT_489200 [Arabidopsis lyrata subsp.
           lyrata] gi|297319963|gb|EFH50385.1| hypothetical protein
           ARALYDRAFT_489200 [Arabidopsis lyrata subsp. lyrata]
          Length = 729

 Score =  204 bits (519), Expect = 6e-51
 Identities = 106/189 (56%), Positives = 129/189 (68%), Gaps = 29/189 (15%)
 Frame = +2

Query: 5   PKPLPFLSPLANSVISSCSKILQKPTEELQHCFETEHPDIIKESLIYARNLLEFCSYQAL 184
           PKP+P LS LANSV+S CSKIL  PTE+LQH F+ E P+ +K+ L YARN LEFCS+QAL
Sbjct: 50  PKPIPQLSLLANSVVSRCSKILNIPTEDLQHHFDVELPESVKQLLTYARNFLEFCSFQAL 109

Query: 185 NIVTRRPDYLADKNFRRLTFDMMLAWEGPSAESAQPNI---------------------- 298
           + V ++PDYL+D+ FR+L FDMMLAWE PS  S Q N                       
Sbjct: 110 HQVMKKPDYLSDQEFRQLLFDMMLAWETPSVTSEQENKDAASPSKQDSEDEDGWSLFYSS 169

Query: 299 -------VDNNKTVGPEAFARIAPACTAIADVITVHNLFDALSTSSGHELHFPVYNKYLR 457
                  VD  K+VG EAFARIAP C AIAD ITVHNLFDAL++SSGH LHF VY+KY+R
Sbjct: 170 PTNMAMQVDEKKSVGQEAFARIAPVCPAIADAITVHNLFDALTSSSGHRLHFIVYDKYIR 229

Query: 458 SLEKVVKSA 484
           +L+K+ K+A
Sbjct: 230 TLDKIFKAA 238


>ref|XP_002267971.1| PREDICTED: uncharacterized protein LOC100243889 [Vitis vinifera]
           gi|297742719|emb|CBI35353.3| unnamed protein product
           [Vitis vinifera]
          Length = 731

 Score =  203 bits (516), Expect = 1e-50
 Identities = 109/192 (56%), Positives = 131/192 (68%), Gaps = 29/192 (15%)
 Frame = +2

Query: 14  LPFLSPLANSVISSCSKILQKPTEELQHCFETEHPDIIKESLIYARNLLEFCSYQALNIV 193
           +P LS  ANSV++ CSKILQ PT+ELQH FE E P+ +K+ L YARN LEFCSY AL   
Sbjct: 51  IPNLSSFANSVVARCSKILQIPTQELQHRFERELPESVKQPLSYARNFLEFCSYLALFQA 110

Query: 194 TRRPDYLADKNFRRLTFDMMLAWEGPSAE--------------------------SAQPN 295
           +R PDYL++  FRRL++DMMLAWE P AE                          S+  N
Sbjct: 111 SRGPDYLSNNEFRRLSYDMMLAWEAPDAESEPLTKEATSCSNQQAEDEDGWSLFYSSSTN 170

Query: 296 I---VDNNKTVGPEAFARIAPACTAIADVITVHNLFDALSTSSGHELHFPVYNKYLRSLE 466
               VD  KTVGPEAFARIAPAC AIAD+ITVHNLF+AL++SS H LHF +Y+KYLRSL+
Sbjct: 171 TAVQVDEEKTVGPEAFARIAPACAAIADIITVHNLFEALTSSSCHRLHFLIYDKYLRSLD 230

Query: 467 KVVKSAANANKS 502
           KV+KSA NA+ S
Sbjct: 231 KVIKSAKNASGS 242


>emb|CAN78564.1| hypothetical protein VITISV_010403 [Vitis vinifera]
          Length = 653

 Score =  203 bits (516), Expect = 1e-50
 Identities = 109/192 (56%), Positives = 131/192 (68%), Gaps = 29/192 (15%)
 Frame = +2

Query: 14  LPFLSPLANSVISSCSKILQKPTEELQHCFETEHPDIIKESLIYARNLLEFCSYQALNIV 193
           +P LS  ANSV++ CSKILQ PT+ELQH FE E P+ +K+ L YARN LEFCSY AL   
Sbjct: 51  IPNLSAFANSVVARCSKILQIPTQELQHRFERELPESVKQPLSYARNFLEFCSYLALFQA 110

Query: 194 TRRPDYLADKNFRRLTFDMMLAWEGPSAE--------------------------SAQPN 295
           +R PDYL++  FRRL++DMMLAWE P AE                          S+  N
Sbjct: 111 SRGPDYLSNNEFRRLSYDMMLAWEAPDAESEPLTKEATSCSNQQAEDEDGWSLFYSSSTN 170

Query: 296 I---VDNNKTVGPEAFARIAPACTAIADVITVHNLFDALSTSSGHELHFPVYNKYLRSLE 466
               VD  KTVGPEAFARIAPAC AIAD+ITVHNLF+AL++SS H LHF +Y+KYLRSL+
Sbjct: 171 TAVQVDEEKTVGPEAFARIAPACAAIADIITVHNLFEALTSSSCHRLHFLIYDKYLRSLD 230

Query: 467 KVVKSAANANKS 502
           KV+KSA NA+ S
Sbjct: 231 KVIKSAKNASGS 242


>ref|NP_197730.1| uncharacterized protein [Arabidopsis thaliana]
           gi|19699053|gb|AAL90894.1| AT5g23390/T32G24_2
           [Arabidopsis thaliana] gi|332005775|gb|AED93158.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 730

 Score =  201 bits (510), Expect = 7e-50
 Identities = 105/189 (55%), Positives = 128/189 (67%), Gaps = 29/189 (15%)
 Frame = +2

Query: 5   PKPLPFLSPLANSVISSCSKILQKPTEELQHCFETEHPDIIKESLIYARNLLEFCSYQAL 184
           PKP+P LS LANSV+S CSKIL   TE+LQH F+ E P+ +K+ L YARN LEFCS+QAL
Sbjct: 51  PKPIPQLSLLANSVVSRCSKILNIQTEDLQHHFDVELPESVKQLLTYARNFLEFCSFQAL 110

Query: 185 NIVTRRPDYLADKNFRRLTFDMMLAWEGPSAESAQPNI---------------------- 298
           + V ++PDYL+D+ FR+L FDMMLAWE PS  S Q N                       
Sbjct: 111 HQVMKKPDYLSDQEFRQLMFDMMLAWETPSVTSEQENKDAASPSKQDSEDEDGWSLFYSS 170

Query: 299 -------VDNNKTVGPEAFARIAPACTAIADVITVHNLFDALSTSSGHELHFPVYNKYLR 457
                  VD  K+VG EAFARIAP C AIAD ITVHNLFDAL++SSGH LH+ VY+KYLR
Sbjct: 171 PTNMAMQVDEKKSVGQEAFARIAPVCPAIADAITVHNLFDALTSSSGHRLHYIVYDKYLR 230

Query: 458 SLEKVVKSA 484
           +L+K+ K+A
Sbjct: 231 TLDKIFKAA 239


Top