BLASTX nr result
ID: Bupleurum21_contig00000633
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00000633 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 171 7e-41 emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 168 4e-40 ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containin... 160 1e-37 ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 158 5e-37 ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2... 156 1e-36 >ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis vinifera] gi|297736890|emb|CBI26091.3| unnamed protein product [Vitis vinifera] Length = 478 Score = 171 bits (432), Expect = 7e-41 Identities = 74/101 (73%), Positives = 83/101 (82%) Frame = +3 Query: 63 GGVQATEGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFC 242 G A EGS +DP EW+ P ETGLEEP+WQLGLGGG + YPERPDEADCIYYL+TGFC Sbjct: 5 GRAPAMEGSPSDPSQEWTGPVAETGLEEPLWQLGLGGGGEAYPERPDEADCIYYLKTGFC 64 Query: 243 GYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365 GYG+RCRFNHPRDR V G +R GGE+PERVGQPVCQ+YM Sbjct: 65 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYM 105 Score = 55.1 bits (131), Expect = 6e-06 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +3 Query: 177 DDLYPERPDEADCIYYLRTGFCGYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQ 356 + ++PERP + +C YY+RTG C +GS C+++HP + + S P R G P C Sbjct: 297 EQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCT 356 Query: 357 YY 362 +Y Sbjct: 357 HY 358 >emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] Length = 518 Score = 168 bits (426), Expect = 4e-40 Identities = 73/101 (72%), Positives = 82/101 (81%) Frame = +3 Query: 63 GGVQATEGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFC 242 G A EGS +DP EW+ P ETGLEEP+W LGLGGG + YPERPDEADCIYYL+TGFC Sbjct: 45 GRAPAMEGSPSDPSQEWTGPVAETGLEEPLWXLGLGGGGEAYPERPDEADCIYYLKTGFC 104 Query: 243 GYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365 GYG+RCRFNHPRDR V G +R GGE+PERVGQPVCQ+YM Sbjct: 105 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYM 145 Score = 55.1 bits (131), Expect = 6e-06 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +3 Query: 177 DDLYPERPDEADCIYYLRTGFCGYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQ 356 + ++PERP + +C YY+RTG C +GS C+++HP + + S P R G P C Sbjct: 337 EQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCT 396 Query: 357 YY 362 +Y Sbjct: 397 HY 398 >ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like [Glycine max] Length = 481 Score = 160 bits (405), Expect = 1e-37 Identities = 71/99 (71%), Positives = 83/99 (83%), Gaps = 1/99 (1%) Frame = +3 Query: 72 QATEGSSADPVAEWSSPGGETGLEEPMWQLGLGG-GDDLYPERPDEADCIYYLRTGFCGY 248 +++EGS +DP EW+ P +TGLEEPMWQLG+GG G++ YP+RPDE DC YYLRTGFCG+ Sbjct: 6 RSSEGSRSDPSPEWAGPEAQTGLEEPMWQLGMGGAGEESYPQRPDEVDCTYYLRTGFCGF 65 Query: 249 GSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365 GSRCRFNHPRDR V GA R + GEYPERVGQPVCQYYM Sbjct: 66 GSRCRFNHPRDRAAVAGAERTT-GEYPERVGQPVCQYYM 103 >ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis] gi|223543980|gb|EEF45506.1| nucleic acid binding protein, putative [Ricinus communis] Length = 481 Score = 158 bits (399), Expect = 5e-37 Identities = 71/95 (74%), Positives = 77/95 (81%) Frame = +3 Query: 81 EGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFCGYGSRC 260 EGS +DP EW+ PG ET LEE WQLGLG + YPERP+EADCIYYLRTGFCGYGSRC Sbjct: 9 EGSQSDPSPEWTGPGPETVLEEGDWQLGLGEVEPGYPERPEEADCIYYLRTGFCGYGSRC 68 Query: 261 RFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365 RFNHPRDR V+GA RA E+PERVGQPVCQYYM Sbjct: 69 RFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYM 103 >ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1| predicted protein [Populus trichocarpa] Length = 477 Score = 156 bits (395), Expect = 1e-36 Identities = 67/95 (70%), Positives = 77/95 (81%) Frame = +3 Query: 81 EGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFCGYGSRC 260 EGS +DP EW+ G ETGLEE +WQLGLG + YPER +E DC+YYLRTGFCGYG+RC Sbjct: 9 EGSQSDPALEWTGSGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARC 68 Query: 261 RFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365 R+NHPRDRN V+GA RA G EYPER GQP+CQYYM Sbjct: 69 RYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYM 103 Score = 54.3 bits (129), Expect = 1e-05 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +3 Query: 177 DDLYPERPDEADCIYYLRTGFCGYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQ 356 + L+PERP + +C YY++TG C + S CR++HP + + + S P R G P C Sbjct: 295 EHLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCS 354 Query: 357 YY 362 +Y Sbjct: 355 HY 356