BLASTX nr result

ID: Bupleurum21_contig00000633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000633
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   171   7e-41
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   168   4e-40
ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containin...   160   1e-37
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici...   158   5e-37
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  171 bits (432), Expect = 7e-41
 Identities = 74/101 (73%), Positives = 83/101 (82%)
 Frame = +3

Query: 63  GGVQATEGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFC 242
           G   A EGS +DP  EW+ P  ETGLEEP+WQLGLGGG + YPERPDEADCIYYL+TGFC
Sbjct: 5   GRAPAMEGSPSDPSQEWTGPVAETGLEEPLWQLGLGGGGEAYPERPDEADCIYYLKTGFC 64

Query: 243 GYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365
           GYG+RCRFNHPRDR  V G +R  GGE+PERVGQPVCQ+YM
Sbjct: 65  GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYM 105



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/62 (37%), Positives = 36/62 (58%)
 Frame = +3

Query: 177 DDLYPERPDEADCIYYLRTGFCGYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQ 356
           + ++PERP + +C YY+RTG C +GS C+++HP + +        S    P R G P C 
Sbjct: 297 EQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCT 356

Query: 357 YY 362
           +Y
Sbjct: 357 HY 358


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  168 bits (426), Expect = 4e-40
 Identities = 73/101 (72%), Positives = 82/101 (81%)
 Frame = +3

Query: 63  GGVQATEGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFC 242
           G   A EGS +DP  EW+ P  ETGLEEP+W LGLGGG + YPERPDEADCIYYL+TGFC
Sbjct: 45  GRAPAMEGSPSDPSQEWTGPVAETGLEEPLWXLGLGGGGEAYPERPDEADCIYYLKTGFC 104

Query: 243 GYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365
           GYG+RCRFNHPRDR  V G +R  GGE+PERVGQPVCQ+YM
Sbjct: 105 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYM 145



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/62 (37%), Positives = 36/62 (58%)
 Frame = +3

Query: 177 DDLYPERPDEADCIYYLRTGFCGYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQ 356
           + ++PERP + +C YY+RTG C +GS C+++HP + +        S    P R G P C 
Sbjct: 337 EQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCT 396

Query: 357 YY 362
           +Y
Sbjct: 397 HY 398


>ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 481

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/99 (71%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
 Frame = +3

Query: 72  QATEGSSADPVAEWSSPGGETGLEEPMWQLGLGG-GDDLYPERPDEADCIYYLRTGFCGY 248
           +++EGS +DP  EW+ P  +TGLEEPMWQLG+GG G++ YP+RPDE DC YYLRTGFCG+
Sbjct: 6   RSSEGSRSDPSPEWAGPEAQTGLEEPMWQLGMGGAGEESYPQRPDEVDCTYYLRTGFCGF 65

Query: 249 GSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365
           GSRCRFNHPRDR  V GA R + GEYPERVGQPVCQYYM
Sbjct: 66  GSRCRFNHPRDRAAVAGAERTT-GEYPERVGQPVCQYYM 103


>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223543980|gb|EEF45506.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 481

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/95 (74%), Positives = 77/95 (81%)
 Frame = +3

Query: 81  EGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFCGYGSRC 260
           EGS +DP  EW+ PG ET LEE  WQLGLG  +  YPERP+EADCIYYLRTGFCGYGSRC
Sbjct: 9   EGSQSDPSPEWTGPGPETVLEEGDWQLGLGEVEPGYPERPEEADCIYYLRTGFCGYGSRC 68

Query: 261 RFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365
           RFNHPRDR  V+GA RA   E+PERVGQPVCQYYM
Sbjct: 69  RFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYM 103


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  156 bits (395), Expect = 1e-36
 Identities = 67/95 (70%), Positives = 77/95 (81%)
 Frame = +3

Query: 81  EGSSADPVAEWSSPGGETGLEEPMWQLGLGGGDDLYPERPDEADCIYYLRTGFCGYGSRC 260
           EGS +DP  EW+  G ETGLEE +WQLGLG  +  YPER +E DC+YYLRTGFCGYG+RC
Sbjct: 9   EGSQSDPALEWTGSGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARC 68

Query: 261 RFNHPRDRNLVVGAMRASGGEYPERVGQPVCQYYM 365
           R+NHPRDRN V+GA RA G EYPER GQP+CQYYM
Sbjct: 69  RYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYM 103



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/62 (37%), Positives = 36/62 (58%)
 Frame = +3

Query: 177 DDLYPERPDEADCIYYLRTGFCGYGSRCRFNHPRDRNLVVGAMRASGGEYPERVGQPVCQ 356
           + L+PERP + +C YY++TG C + S CR++HP +  +    +  S    P R G P C 
Sbjct: 295 EHLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCS 354

Query: 357 YY 362
           +Y
Sbjct: 355 HY 356


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