BLASTX nr result

ID: Bupleurum21_contig00000625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000625
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|2...   149   5e-34
ref|XP_002515284.1| conserved hypothetical protein [Ricinus comm...   149   9e-34
ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [V...   147   3e-33
ref|XP_002302764.1| predicted protein [Populus trichocarpa] gi|2...   147   4e-33
gb|ABK95858.1| unknown [Populus trichocarpa]                          145   1e-32

>ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|222861071|gb|EEE98613.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  149 bits (377), Expect = 5e-34
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
 Frame = +3

Query: 15  AAVNLSSTLVVMAKASDSPKSIRFSRLNEPWKRSGSHWAGQRVARPMSTNPD-LSEKIAE 191
           A +NLS T  V+AKA+D+PK+    +LN+ W+RS    +G+   RP+   P+ +SEK+ +
Sbjct: 5   AGLNLS-TPRVLAKATDTPKAQPLIKLNQQWRRSYQLGSGRVQVRPVRAAPEGISEKVEK 63

Query: 192 SIKEAEDLCAGDPSSGECVAAWDEVEELSAAISHAKDKMKVSDPLEEFCKDNMETDECRT 371
           SIKEAE+ C+GD +SGEC AAWDEVEELSAA SHAKDK K SDPLEE+CKDN ETDECRT
Sbjct: 64  SIKEAEEACSGDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETDECRT 123

Query: 372 YED 380
           YED
Sbjct: 124 YED 126


>ref|XP_002515284.1| conserved hypothetical protein [Ricinus communis]
           gi|223545764|gb|EEF47268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score =  149 bits (375), Expect = 9e-34
 Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
 Frame = +3

Query: 18  AVNLSSTLVVMAKASDSPKSIRFSRLNEPWKRSGSHWAGQRVA-RPMSTNPD-LSEKIAE 191
           ++N+S+   V+AKA+D+PK+    +LN PWKR+G     QR+  +P+   PD +SEK+ E
Sbjct: 6   SLNISTPARVIAKATDAPKAQPIFKLNNPWKRAGCQLRSQRMQIKPVRAAPDSISEKVEE 65

Query: 192 SIKEAEDLCAGDPSSGECVAAWDEVEELSAAISHAKDKMKVSDPLEEFCKDNMETDECRT 371
           SIK+A+  C  DP+SGECVAAWD VEELSAA SHA+DK K SDPLE +CKDN ETDECRT
Sbjct: 66  SIKDAKQACEDDPASGECVAAWDTVEELSAAASHARDKAKDSDPLETYCKDNPETDECRT 125

Query: 372 YED 380
           YED
Sbjct: 126 YED 128


>ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [Vitis vinifera]
          Length = 128

 Score =  147 bits (371), Expect = 3e-33
 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 3/127 (2%)
 Frame = +3

Query: 9   ATAAVNLSSTLVVMAKASDSPKS--IRFSRLNEPWKRSGSHWAGQRVARPMSTNPD-LSE 179
           AT A    ST  V+A+A+DSPKS  I+   L+ PWKR     AG+   RP++  PD +SE
Sbjct: 2   ATIAGVSLSTPRVLARAADSPKSQTIQSPWLSNPWKRPSRFGAGRMCVRPVAAAPDSISE 61

Query: 180 KIAESIKEAEDLCAGDPSSGECVAAWDEVEELSAAISHAKDKMKVSDPLEEFCKDNMETD 359
           K+ ESIK AE+ C+ DP+SGECVAAWDEVEELSAA SHA+DK K SDPLE +CKDN E +
Sbjct: 62  KVVESIKNAEEKCSDDPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDNPEDE 121

Query: 360 ECRTYED 380
           ECRTYED
Sbjct: 122 ECRTYED 128


>ref|XP_002302764.1| predicted protein [Populus trichocarpa] gi|222844490|gb|EEE82037.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  147 bits (370), Expect = 4e-33
 Identities = 77/127 (60%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +3

Query: 6   SATAAVNLSSTLVVMAKASDSPKSIRFSRLNEPWKRSGSHWAGQRVA-RPMSTNPD-LSE 179
           +A A +NLS T  V+AKA+D PK+    +LN+PW+R+    +G R+  RP+   PD +SE
Sbjct: 2   AAIAGLNLS-TPRVLAKATDKPKAQALVKLNQPWRRTYHLGSGGRMQIRPVRAAPDSISE 60

Query: 180 KIAESIKEAEDLCAGDPSSGECVAAWDEVEELSAAISHAKDKMKVSDPLEEFCKDNMETD 359
           K+ +SIK+AE  C+ D +SGEC AAWDEVEELSAA SHAKDK K SDPLEE+CKDN ETD
Sbjct: 61  KVEKSIKDAEAACSDDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETD 120

Query: 360 ECRTYED 380
           ECRTYED
Sbjct: 121 ECRTYED 127


>gb|ABK95858.1| unknown [Populus trichocarpa]
          Length = 127

 Score =  145 bits (366), Expect = 1e-32
 Identities = 76/124 (61%), Positives = 94/124 (75%), Gaps = 2/124 (1%)
 Frame = +3

Query: 15  AAVNLSSTLVVMAKASDSPKSIRFSRLNEPWKRSGSHWAGQRVA-RPMSTNPD-LSEKIA 188
           A +NLS T  V+AKA+D PK+    +LN+PW+R+    +G R+  RP+   PD +SEK+ 
Sbjct: 5   AGLNLS-TPRVLAKATDKPKAQALVKLNQPWRRTYHLGSGGRMQIRPVRAAPDSISEKVE 63

Query: 189 ESIKEAEDLCAGDPSSGECVAAWDEVEELSAAISHAKDKMKVSDPLEEFCKDNMETDECR 368
           +SIK+AE  C+ D +SGEC AAWDEVEELSAA SHAKDK K SDPLEE+CKDN ETDECR
Sbjct: 64  KSIKDAEAACSDDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETDECR 123

Query: 369 TYED 380
           TYED
Sbjct: 124 TYED 127


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