BLASTX nr result

ID: Bupleurum21_contig00000623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000623
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317273.1| hypothetical protein POPTRDRAFT_834003 [Popu...    59   3e-07
gb|ABK95035.1| unknown [Populus trichocarpa]                           59   4e-07
dbj|BAF81515.1| oxygen-evolving enhancer protein 3-2 [Brassica r...    59   4e-07
ref|XP_002869896.1| PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrat...    59   5e-07
ref|NP_001031687.1| oxygen-evolving enhancer protein 3-1 [Arabid...    58   7e-07

>ref|XP_002317273.1| hypothetical protein POPTRDRAFT_834003 [Populus trichocarpa]
           gi|222860338|gb|EEE97885.1| hypothetical protein
           POPTRDRAFT_834003 [Populus trichocarpa]
          Length = 234

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = -1

Query: 289 NTVISSKSKDEKKSLQALTGKLYNVMDGLDXXXXXXXXXXXXXXXXETVSALNEVLSKLG 110
           NTVIS+KSKDEKKSL+ LTGKL++ +  LD                +TVSALN+VL+KLG
Sbjct: 175 NTVISAKSKDEKKSLKELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


>gb|ABK95035.1| unknown [Populus trichocarpa]
          Length = 234

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = -1

Query: 289 NTVISSKSKDEKKSLQALTGKLYNVMDGLDXXXXXXXXXXXXXXXXETVSALNEVLSKLG 110
           NTVIS+KSKDEKKSL+ LTGKL++ +  LD                +TVSALN+VL+KLG
Sbjct: 175 NTVISAKSKDEKKSLKELTGKLFDTIGNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


>dbj|BAF81515.1| oxygen-evolving enhancer protein 3-2 [Brassica rapa]
          Length = 227

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = -1

Query: 289 NTVISSKSKDEKKSLQALTGKLYNVMDGLDXXXXXXXXXXXXXXXXETVSALNEVLSKLG 110
           NT+ISSKSKDEKKSL+ LTGKL++ ++ LD                ETVS LN+VL+KLG
Sbjct: 168 NTIISSKSKDEKKSLKELTGKLFDTINNLDYAAKKKSTPDAEKYYSETVSTLNDVLAKLG 227


>ref|XP_002869896.1| PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297315732|gb|EFH46155.1| PSBQ/PSBQ-1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 224

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/60 (55%), Positives = 39/60 (65%)
 Frame = -1

Query: 289 NTVISSKSKDEKKSLQALTGKLYNVMDGLDXXXXXXXXXXXXXXXXETVSALNEVLSKLG 110
           NT+ISSK KDEKKSL+ LT KL++ +D LD                ETVSALNEVL+KLG
Sbjct: 165 NTIISSKPKDEKKSLKELTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224


>ref|NP_001031687.1| oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana]
           gi|193806375|sp|Q9XFT3.3|PSBQ1_ARATH RecName:
           Full=Oxygen-evolving enhancer protein 3-1,
           chloroplastic; Short=OEE3; AltName: Full=16 kDa subunit
           of oxygen evolving system of photosystem II; AltName:
           Full=OEC 16 kDa subunit; Flags: Precursor
           gi|332659036|gb|AEE84436.1| oxygen-evolving enhancer
           protein 3-1 [Arabidopsis thaliana]
          Length = 224

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/60 (55%), Positives = 39/60 (65%)
 Frame = -1

Query: 289 NTVISSKSKDEKKSLQALTGKLYNVMDGLDXXXXXXXXXXXXXXXXETVSALNEVLSKLG 110
           NT+ISSK KDEKKSL+ LT KL++ +D LD                ETVSALNEVL+KLG
Sbjct: 165 NTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224


Top