BLASTX nr result

ID: Bupleurum21_contig00000622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000622
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634163.1| PREDICTED: nascent polypeptide-associated co...   197   3e-48
ref|XP_002521293.1| nascent polypeptide associated complex alpha...   188   2e-45
gb|AFK39074.1| unknown [Lotus japonicus]                              182   1e-43
ref|XP_003523310.1| PREDICTED: nascent polypeptide-associated co...   182   2e-43
ref|NP_001238363.1| uncharacterized protein LOC100499943 [Glycin...   182   2e-43

>ref|XP_003634163.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like protein 2-like [Vitis vinifera]
           gi|302143993|emb|CBI23098.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  197 bits (501), Expect = 3e-48
 Identities = 110/166 (66%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2   DSDDKEDGAPGAXXXXXXXXXXXXXXXAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV 181
           + D+KEDGA GA               AMLKLGMKPVTGV RVTIKRTKNILFFISKPDV
Sbjct: 45  EDDEKEDGAQGANEGSKQSRSEKKSRKAMLKLGMKPVTGVGRVTIKRTKNILFFISKPDV 104

Query: 182 FKSPNSETYIIFGEAKIEDXXXXXXXXXXXXFKMPDMGSVMAKSDIPAV---TQAXXXXX 352
           FKSPNSETY+IFGEAKIED            F+MPDMGSVMAKSDI A    TQA     
Sbjct: 105 FKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKSDISAAAAGTQADEEEE 164

Query: 353 XXXXXXXNARDIELVMTQAGVSRNKAVKALKTHDGDIVSAIMELTT 490
                    RDI+LVMTQAGVSR+KAVKALKTH+GDIVSAIMELTT
Sbjct: 165 VIDETGVEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 210


>ref|XP_002521293.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223539478|gb|EEF41067.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 228

 Score =  188 bits (478), Expect = 2e-45
 Identities = 105/166 (63%), Positives = 112/166 (67%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2   DSDDKEDGAPGAXXXXXXXXXXXXXXXAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV 181
           + DDKE G PGA               AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV
Sbjct: 63  EDDDKEAGTPGANGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV 122

Query: 182 FKSPNSETYIIFGEAKIEDXXXXXXXXXXXXFKMPDMGSVMAKSDI---PAVTQAXXXXX 352
           FKSPNSETY+IFGEAKIED            F+MPDM SV+ KSD+    A  QA     
Sbjct: 123 FKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMASVLPKSDLSGAAAAAQADEEEE 182

Query: 353 XXXXXXXNARDIELVMTQAGVSRNKAVKALKTHDGDIVSAIMELTT 490
                    RDI+LVMTQAGV R+KAVKALKTH GDIVSAIMELTT
Sbjct: 183 EVDETGVEPRDIDLVMTQAGVPRSKAVKALKTHSGDIVSAIMELTT 228


>gb|AFK39074.1| unknown [Lotus japonicus]
          Length = 227

 Score =  182 bits (462), Expect = 1e-43
 Identities = 102/165 (61%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   DSDDKEDGAPGAXXXXXXXXXXXXXXXAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV 181
           + DDKEDGA G                AMLKLG+KPVTGVSRVTIKRTKNILFFISKPDV
Sbjct: 63  EDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDV 122

Query: 182 FKSPNSETYIIFGEAKIEDXXXXXXXXXXXXFKMPDMGSVMAKSDIPAVTQAXXXXXXXX 361
           FKSPNSETY+IFGEAKIED            F+MPDMGSVMAK D               
Sbjct: 123 FKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPEEEEE 182

Query: 362 XXXXNA--RDIELVMTQAGVSRNKAVKALKTHDGDIVSAIMELTT 490
                    DI+LVMTQAGVSR KAVKALKTH+GDIV AIMELTT
Sbjct: 183 VDETGVEPHDIDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELTT 227


>ref|XP_003523310.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like protein 2-like [Glycine max]
          Length = 223

 Score =  182 bits (461), Expect = 2e-43
 Identities = 102/164 (62%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
 Frame = +2

Query: 2   DSDDKEDGAPGAXXXXXXXXXXXXXXXAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV 181
           D DDKED A G                AMLKLG+KPVTGVSRVTIKRTKNILFFISKPDV
Sbjct: 60  DEDDKEDDAQGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDV 119

Query: 182 FKSPNSETYIIFGEAKIEDXXXXXXXXXXXXFKMPDMGSVMAK-SDIPAVTQAXXXXXXX 358
           FKSPNSETY+IFGEAKIED            F+MPDMGSV AK  D  A           
Sbjct: 120 FKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVTAKQEDAAAAAAQPEEEEEV 179

Query: 359 XXXXXNARDIELVMTQAGVSRNKAVKALKTHDGDIVSAIMELTT 490
                   DI+LVMTQAGVSR+KAVKALKTH+GDIV AIMELTT
Sbjct: 180 DETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 223


>ref|NP_001238363.1| uncharacterized protein LOC100499943 [Glycine max]
           gi|255627897|gb|ACU14293.1| unknown [Glycine max]
          Length = 225

 Score =  182 bits (461), Expect = 2e-43
 Identities = 103/166 (62%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2   DSDDKEDGAPGAXXXXXXXXXXXXXXXAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDV 181
           D DDKED A G                AMLKLG+KPVTGVSRVTIKRTKNILFFISKPDV
Sbjct: 60  DDDDKEDDAQGGAEGGKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDV 119

Query: 182 FKSPNSETYIIFGEAKIEDXXXXXXXXXXXXFKMPDMGSVMAKSD---IPAVTQAXXXXX 352
           FKSPNSETYIIFGEAKIED            F MPD+GSV+AK D     A  Q      
Sbjct: 120 FKSPNSETYIIFGEAKIEDLSSQLQTQAAQQFGMPDVGSVLAKQDQDAAAAAAQPEEEEE 179

Query: 353 XXXXXXXNARDIELVMTQAGVSRNKAVKALKTHDGDIVSAIMELTT 490
                     DI+LVMTQAGVSR+KAVKALKTH+GDIV AIMELTT
Sbjct: 180 EVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 225


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