BLASTX nr result

ID: Bupleurum21_contig00000607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000607
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323262.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002308908.1| predicted protein [Populus trichocarpa] gi|1...    59   4e-07
ref|NP_187630.1| putative calcium-binding protein CML36 [Arabido...    57   2e-06
ref|XP_002881773.1| hypothetical protein ARALYDRAFT_903457 [Arab...    56   3e-06
ref|XP_002276334.1| PREDICTED: probable calcium-binding protein ...    56   3e-06

>ref|XP_002323262.1| predicted protein [Populus trichocarpa] gi|222867892|gb|EEF05023.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
 Frame = +3

Query: 255 TPTTVLPQTSSSSSD-----FYELLQAFKMIDSDGDGKISRAELGALLARVGSDP 404
           TPT+VLPQ S   SD     ++EL QAFK+ID D DG +SR EL ALL R+G++P
Sbjct: 60  TPTSVLPQISGDWSDMSTDFYFELTQAFKVIDRDNDGLVSRNELEALLTRLGAEP 114


>ref|XP_002308908.1| predicted protein [Populus trichocarpa] gi|118488683|gb|ABK96152.1|
           unknown [Populus trichocarpa]
           gi|222854884|gb|EEE92431.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
 Frame = +3

Query: 255 TPTTVLPQTSSSSSD-----FYELLQAFKMIDSDGDGKISRAELGALLARVGSDP 404
           TPT++LPQ S   +D     ++EL QAFK+ID D DG +SR EL ALL R+G++P
Sbjct: 57  TPTSILPQVSGDWTDISADLYFELTQAFKLIDRDNDGLVSRNELEALLTRLGAEP 111


>ref|NP_187630.1| putative calcium-binding protein CML36 [Arabidopsis thaliana]
           gi|75337581|sp|Q9SS31.1|CML36_ARATH RecName:
           Full=Probable calcium-binding protein CML36; AltName:
           Full=Calmodulin-like protein 36
           gi|6056210|gb|AAF02827.1|AC009400_23 calmodulin-like
           protein [Arabidopsis thaliana]
           gi|27808532|gb|AAO24546.1| At3g10190 [Arabidopsis
           thaliana] gi|110736233|dbj|BAF00087.1| calmodulin like
           protein [Arabidopsis thaliana]
           gi|332641348|gb|AEE74869.1| putative calcium-binding
           protein CML36 [Arabidopsis thaliana]
          Length = 209

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = +3

Query: 255 TPTTVLPQTSSSSSDFYELLQAFKMIDSDGDGKISRAELGALLARVGSDP 404
           TPT++LP+  S  S + E+LQAFK+ID D DG +SR +L +LL+R+G DP
Sbjct: 54  TPTSILPEVPSPYS-YVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDP 102


>ref|XP_002881773.1| hypothetical protein ARALYDRAFT_903457 [Arabidopsis lyrata subsp.
           lyrata] gi|297327612|gb|EFH58032.1| hypothetical protein
           ARALYDRAFT_903457 [Arabidopsis lyrata subsp. lyrata]
          Length = 216

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = +3

Query: 252 ATPTTVLPQTSSSSSDFY-ELLQAFKMIDSDGDGKISRAELGALLARVGSDP 404
           ATP +VLPQ   +S DFY EL+QAFK+ID D DG +SR +L AL++R+  +P
Sbjct: 54  ATPISVLPQ---NSGDFYAELIQAFKLIDRDDDGVVSRGDLAALISRLSPEP 102


>ref|XP_002276334.1| PREDICTED: probable calcium-binding protein CML35 [Vitis vinifera]
          Length = 222

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 9/59 (15%)
 Frame = +3

Query: 255 TPTTVLP----QTSSSSSDFY-----ELLQAFKMIDSDGDGKISRAELGALLARVGSDP 404
           TPT+VLP    + S   SDF      EL+ AFKMID DGDGKI++ EL ALL+RVG +P
Sbjct: 58  TPTSVLPMHSYEISGDWSDFSSDIQTELVHAFKMIDRDGDGKITKRELEALLSRVGVEP 116


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