BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000588
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   248   2e-63
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              240   5e-61
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   229   7e-58
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   229   7e-58
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   216   6e-54

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  248 bits (633), Expect = 2e-63
 Identities = 167/374 (44%), Positives = 219/374 (58%), Gaps = 24/374 (6%)
 Frame = -3

Query: 1051 AVPKEKQKQYQPKLQTQMPVILNVV-------------DDSNAIILP---GKKQHGTKKM 920
            A+P +     + +++ QM + L  +             DDSNAIILP   GKK+ G K+ 
Sbjct: 63   ALPPQSSSDSRARIEMQMELSLENLEQSSGQDLWSSKGDDSNAIILPEKKGKKRKGMKQE 122

Query: 919  NKVCEIQRKRRNAPEHSKTQKRKLHKLQVDKEKQLLLLKSIETLEKYKIGDVAQSLMLSS 740
            ++  +  + R+     S +QKRKL KL+ +KEK LLL KSIETLEKYKI + A SL+ SS
Sbjct: 123  HEKFKTNKTRKL----SASQKRKLKKLEEEKEKSLLLSKSIETLEKYKIREDAFSLLQSS 178

Query: 739  KNLGQVETFQAKRTREVQLSKVGLRLPTNNQPIKRKNNDNTSKFESQSKRLHLKESCDVS 560
            +NLGQVET   KR R V+ SK GL +P +++P K ++ +     E  S ++  K+  D S
Sbjct: 179  QNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQDGE----MEPDSNKIQSKQEFDES 234

Query: 559  SFKDPLIGDREFMQVDSSIRGRGVGDVGRCETPVR--------FKETSFENCEIPVPLNQ 404
                P +  RE +   S   G     V   E  V          KE S +N +  +   +
Sbjct: 235  DAMWPRMVQREVLSNASISLGFTSELVCSTELAVNSRHSPTLPAKEVSEKNYDTSMQDRR 294

Query: 403  QKVLPISVFTVPKVDKTVDMIHEYQAGYLSGISNLANGHPGGARSAPIVVHVSRPPEIEN 224
                  +     K  K+ D+          G SNL +       + P VVHVSRP E+EN
Sbjct: 295  NSTPTSTTADGQKNIKSKDVPDWNLNLNFRGTSNLPDCSLQPI-TTPTVVHVSRPTEVEN 353

Query: 223  SRKDLPIVMMEQEIMEAINENKSVIICGETGCGKTTQVPQFLYEAGFGSSRSSVKSGMIG 44
            +RKDLPIVMMEQEIMEAIN++ +VIICGETGCGKTTQVPQFLYEAGFGS ++SV+SG+IG
Sbjct: 354  NRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQVPQFLYEAGFGSKQASVQSGIIG 413

Query: 43   VTQPRRVAVLATAK 2
            VTQPRRVAVLATAK
Sbjct: 414  VTQPRRVAVLATAK 427


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  240 bits (612), Expect = 5e-61
 Identities = 155/328 (47%), Positives = 199/328 (60%), Gaps = 3/328 (0%)
 Frame = -3

Query: 976 DDSNAIILP---GKKQHGTKKMNKVCEIQRKRRNAPEHSKTQKRKLHKLQVDKEKQLLLL 806
           DDSNAIILP   GKK+ G K+ ++  +  + R+     S +QKRKL KL+ +KEK LLL 
Sbjct: 22  DDSNAIILPEKKGKKRKGMKQEHEKFKTNKTRKL----SASQKRKLKKLEEEKEKSLLLS 77

Query: 805 KSIETLEKYKIGDVAQSLMLSSKNLGQVETFQAKRTREVQLSKVGLRLPTNNQPIKRKNN 626
           KSIETLEKYKI + A SL+ SS+NLGQVET   KR R V+ SK GL +P +++P K ++ 
Sbjct: 78  KSIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQDG 137

Query: 625 DNTSKFESQSKRLHLKESCDVSSFKDPLIGDREFMQVDSSIRGRGVGDVGRCETPVRFKE 446
           +     E  S ++  K+  D S     L           ++  R    +   E   +  +
Sbjct: 138 E----MEPDSNKIQSKQEFDESDAITEL-----------AVNSRHSPTLPAKEVSEKNYD 182

Query: 445 TSFENCEIPVPLNQQKVLPISVFTVPKVDKTVDMIHEYQAGYLSGISNLANGHPGGARSA 266
           TS ++     P +          T     K +            G SNL +       + 
Sbjct: 183 TSMQDRRNSTPTS----------TTADGQKNI-----------KGTSNLPDCSLQPI-TT 220

Query: 265 PIVVHVSRPPEIENSRKDLPIVMMEQEIMEAINENKSVIICGETGCGKTTQVPQFLYEAG 86
           P VVHVSRP E+EN+RKDLPIVMMEQEIMEAIN++ +VIICGETGCGKTTQVPQFLYEAG
Sbjct: 221 PTVVHVSRPTEVENNRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQVPQFLYEAG 280

Query: 85  FGSSRSSVKSGMIGVTQPRRVAVLATAK 2
           FGS ++SV+SG+IGVTQPRRVAVLATAK
Sbjct: 281 FGSKQASVQSGIIGVTQPRRVAVLATAK 308


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  229 bits (585), Expect = 7e-58
 Identities = 159/348 (45%), Positives = 212/348 (60%), Gaps = 25/348 (7%)
 Frame = -3

Query: 970  SNAIILPGKKQHGTKKMN--KVCE-IQRKRRNAPEHSKTQKRKLHKLQVDKEKQLLLLKS 800
            SN ++L G K+   K+ N  K C+ IQ  ++  P+ SK+QKRK+ KL+ +KEK LLL KS
Sbjct: 23   SNQVMLYGSKRSDKKRKNPNKGCKGIQLNKK--PKLSKSQKRKIMKLEEEKEKSLLLSKS 80

Query: 799  IETLEKYKIGDVAQSLMLSSKNLGQVETFQAKRTREVQLSKVGLRLPTNNQPIKRKNNDN 620
            +ETLEKYKI D A  L+ SS N+G+ ET   KR+R++Q SKVG+ +P N+Q + + ++D 
Sbjct: 81   LETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFSKVGIEVPGNDQQLDKTSSD- 139

Query: 619  TSKFESQSKRLHLKESCDVSSFKD---PLIGDREFMQVDSSIRGRG----VGDVGRC--E 467
             S++ES    L +     +S+  D   P + ++E  +   S +       V + G+    
Sbjct: 140  ISQYESHCGSLDISPCHQLSANADEDGPFVAEKEVTRGLDSFKDLDNDTIVPNDGKSLSS 199

Query: 466  TPVRFKETSFENCEIPVPLNQQKVLPISVFTVPKVDKTVDMIHEYQAGYLSGISNLANGH 287
             P + + T        V L  ++ L  ++ TV    +   M  E   G L+G+ +  +G 
Sbjct: 200  LPDKVENTG------AVLLEDERDLSCTMCTVGGFKEPEIM--ELIVG-LNGLKDKEDGI 250

Query: 286  PG-------------GARSAPIVVHVSRPPEIENSRKDLPIVMMEQEIMEAINENKSVII 146
            P                 S PIVV VSRP E+E+ RKDLPIVMMEQEIMEAINEN  VII
Sbjct: 251  PKVEICTTSNLLPEMRLLSKPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 310

Query: 145  CGETGCGKTTQVPQFLYEAGFGSSRSSVKSGMIGVTQPRRVAVLATAK 2
            CGETGCGKTTQVPQFLYEAGFGSS+SS + G IGVTQPRRVAVLATAK
Sbjct: 311  CGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAK 358


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  229 bits (585), Expect = 7e-58
 Identities = 159/348 (45%), Positives = 212/348 (60%), Gaps = 25/348 (7%)
 Frame = -3

Query: 970  SNAIILPGKKQHGTKKMN--KVCE-IQRKRRNAPEHSKTQKRKLHKLQVDKEKQLLLLKS 800
            SN ++L G K+   K+ N  K C+ IQ  ++  P+ SK+QKRK+ KL+ +KEK LLL KS
Sbjct: 23   SNQVMLYGSKRSDKKRKNPNKGCKGIQLNKK--PKLSKSQKRKIMKLEEEKEKSLLLSKS 80

Query: 799  IETLEKYKIGDVAQSLMLSSKNLGQVETFQAKRTREVQLSKVGLRLPTNNQPIKRKNNDN 620
            +ETLEKYKI D A  L+ SS N+G+ ET   KR+R++Q SKVG+ +P N+Q + + ++D 
Sbjct: 81   LETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFSKVGIEVPGNDQQLDKTSSD- 139

Query: 619  TSKFESQSKRLHLKESCDVSSFKD---PLIGDREFMQVDSSIRGRG----VGDVGRC--E 467
             S++ES    L +     +S+  D   P + ++E  +   S +       V + G+    
Sbjct: 140  ISQYESHCGSLDISPCHQLSANADEDGPFVAEKEVTRGLDSFKDLDNDTIVPNDGKSLSS 199

Query: 466  TPVRFKETSFENCEIPVPLNQQKVLPISVFTVPKVDKTVDMIHEYQAGYLSGISNLANGH 287
             P + + T        V L  ++ L  ++ TV    +   M  E   G L+G+ +  +G 
Sbjct: 200  LPDKVENTG------AVLLEDERDLSCTMCTVGGFKEPEIM--ELIVG-LNGLKDKEDGI 250

Query: 286  PG-------------GARSAPIVVHVSRPPEIENSRKDLPIVMMEQEIMEAINENKSVII 146
            P                 S PIVV VSRP E+E+ RKDLPIVMMEQEIMEAINEN  VII
Sbjct: 251  PKVEICTTSNLLPEMRLLSKPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 310

Query: 145  CGETGCGKTTQVPQFLYEAGFGSSRSSVKSGMIGVTQPRRVAVLATAK 2
            CGETGCGKTTQVPQFLYEAGFGSS+SS + G IGVTQPRRVAVLATAK
Sbjct: 311  CGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAK 358


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1331

 Score =  216 bits (551), Expect = 6e-54
 Identities = 144/344 (41%), Positives = 199/344 (57%), Gaps = 20/344 (5%)
 Frame = -3

Query: 973  DSNAIILPGKKQHGTKKMNKVCEIQRKRRNAPEH-----SKTQKRKLHKLQVDKEKQLLL 809
            DSNA+ILP KK    K+M +  E  +KR     +     SKTQK+KL K + DKEKQLLL
Sbjct: 12   DSNALILPTKKMKKRKEMEQ--ERGKKRGKVQSNKKQKLSKTQKKKLKKSEDDKEKQLLL 69

Query: 808  LKSIETLEKYKIGDVAQSLMLSSKNLGQVETFQAKRTREVQLSKVGLRLPTNNQPIKRKN 629
             K+++TL +  + + A  L+ SS N+ +VET + KR + V L K GL +P ++   K+++
Sbjct: 70   EKALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLDVPHDDDLSKKQD 129

Query: 628  NDNTSKFESQSKRLHLKESCDVSSFKD-----PLIGDREFMQVDSSIRGRGVGDVGRCET 464
               TS  ES+ + +H   +  V  F++     P   ++E +   +         +   + 
Sbjct: 130  IACTS--ESEEEEIH---TVQVKEFEENDVIQPFRTEKEILYTTTV-------PLESTQE 177

Query: 463  PVRFKET-SFENCEIPVPLNQQKVLPISVFTVPKVDKTVDMI---------HEYQAGYLS 314
            PV   E  ++E    PV        P  + +     +++D I         +E      +
Sbjct: 178  PVHRNEVINYETVAEPVADVSTDKQPDEIRSSSPTSRSIDDIKSTNSKDRKNENPTTNFN 237

Query: 313  GISNLANGHPGGARSAPIVVHVSRPPEIENSRKDLPIVMMEQEIMEAINENKSVIICGET 134
             +SNL +       + P VVHV RPPE++  RKDLPIVMMEQEIMEAIN N SVI+CGET
Sbjct: 238  ELSNLPHVSTQRPLTTPTVVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGET 297

Query: 133  GCGKTTQVPQFLYEAGFGSSRSSVKSGMIGVTQPRRVAVLATAK 2
            GCGKTTQVPQFLYEAG+GSS+   +SG+IGVTQPRRVAVLATAK
Sbjct: 298  GCGKTTQVPQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAK 341