BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000574
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   340   5e-91
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2...   325   2e-86
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi...   317   5e-84
ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arab...   314   4e-83
ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cy...   313   7e-83

>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  340 bits (873), Expect = 5e-91
 Identities = 181/277 (65%), Positives = 211/277 (76%), Gaps = 9/277 (3%)
 Frame = +3

Query: 141 MDLAKKRKLDENGLLQPIFD----LSVADVRKIIDSFTQDQLLDIVQNAAVRHLDVLDAV 308
           MD  KKRK+DENGL+    D    L+  D RKII+ F  DQLL+I+QNAAVRHLDVLDA+
Sbjct: 1   MDATKKRKMDENGLVSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAI 60

Query: 309 RSIADQDLSQRKLFIRGLGWDTTNENLAAVFSAYGELDEAVVILDKATGKSKGFGFLTFK 488
           RSIAD+DL+QRKLFIRGLGWDTT E L  +FSAYGEL+EAVVILDK T KSKG+GF+TFK
Sbjct: 61  RSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFK 120

Query: 489 HIDGAVRALKEPSKKIDGRMTVTNLASAXXXXXXVMQQPVDVSMRKIYVANVPYEMPSDR 668
           H+DGA+ ALKEPSKKIDGRMTVT LA++           VDVSMRKIYVANVP +MP+DR
Sbjct: 121 HVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVPVDMPADR 180

Query: 669 LLGYFLSYGEIEEGPLGFDKVTGKSKGFALFVYKTADGARAALVEPIKNIDGVQLNCKMA 848
           LL +F SYGEIEEGPLGFDK TGKS+GFALFVYKTA+ A+AALV+P K IDG QL CK+A
Sbjct: 181 LLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLA 240

Query: 849 ID----XXXXXXXXSVGVQGEV-HGNGVGLQQTSVLP 944
           I+              GV GE  HG+G+G+     +P
Sbjct: 241 IEGKKGKTGGPAQAPTGVPGEAGHGDGLGVPPQGSMP 277



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 30/58 (51%), Positives = 35/58 (60%)
 Frame = +3

Query: 1443 GRMSSLYGLQPNSAGIASGPYSGSAHYSLSGGSGYQNQNNQTTGASPAGRGPYSGMYP 1616
            G  SSLY L P++ G+ SG Y  S HYSLS  S Y +Q +Q  G SP  R P  GMYP
Sbjct: 386  GGGSSLYRLPPSTVGMPSGGYPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMYP 443


>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  325 bits (833), Expect = 2e-86
 Identities = 173/272 (63%), Positives = 203/272 (74%), Gaps = 12/272 (4%)
 Frame = +3

Query: 141 MDLAKKRKLDENGLLQPIFDL------SVADVRKIIDSFTQDQLLDIVQNAAVRHLDVLD 302
           MD  KKRKL+ENG++    DL      +  D RK+++ FT DQLLDI+QNA VRH D+L+
Sbjct: 1   MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILE 60

Query: 303 AVRSIADQDLSQRKLFIRGLGWDTTNENLAAVFSAYGELDEAVVILDKATGKSKGFGFLT 482
           AVRSIAD D +QRKLFIRGLGW+TT ENL  +FS YGEL+EAVVILDK TGKSKG+GF+ 
Sbjct: 61  AVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVI 120

Query: 483 FKHIDGAVRALKEPSKKIDGRMTVTNLASAXXXXXXVMQQP------VDVSMRKIYVANV 644
           +KH+DGA+ ALKEPSKKIDGR+TVT LA A                 VDV+MRKIYVANV
Sbjct: 121 YKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANV 180

Query: 645 PYEMPSDRLLGYFLSYGEIEEGPLGFDKVTGKSKGFALFVYKTADGARAALVEPIKNIDG 824
           PYEMPSD+LL +F  YGEIEEGPLGFDK TGKSKGFALFVYKTA+GA+AAL+EP+K I+G
Sbjct: 181 PYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEG 240

Query: 825 VQLNCKMAIDXXXXXXXXSVGVQGEVHGNGVG 920
            QLNCK+AID          G +G   G G G
Sbjct: 241 RQLNCKLAID----------GKRGRQPGGGQG 262


>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|42572443|ref|NP_974317.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|8777484|dbj|BAA97064.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|20259621|gb|AAM14167.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
           AT3G15010 [Arabidopsis thaliana]
           gi|332642081|gb|AEE75602.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|332642082|gb|AEE75603.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 404

 Score =  317 bits (813), Expect = 5e-84
 Identities = 166/276 (60%), Positives = 205/276 (74%), Gaps = 15/276 (5%)
 Frame = +3

Query: 141 MDLAKKRKLDENG---------LLQPIFDLSVADVRKIIDSFTQDQLLDIVQNAAVRHLD 293
           MD+ KKRKLDENG          + P   LS  D RKII+ FT DQLLD++Q A VRH D
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPT-RLSPQDARKIIERFTTDQLLDLLQEAIVRHPD 59

Query: 294 VLDAVRSIADQDLSQRKLFIRGLGWDTTNENLAAVFSAYGELDEAVVILDKATGKSKGFG 473
           VL++VR  AD D+SQRKLFIRGL  DTT E L ++FS+YG+L+EA+VILDK TGKSKG+G
Sbjct: 60  VLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYG 119

Query: 474 FLTFKHIDGAVRALKEPSKKIDGRMTVTNLASAXXXXXXVMQQPVDVSMRKIYVANVPYE 653
           F+TF H+DGA+ ALKEPSKKIDGR+TVT LA++         Q  D+SMRKIYVANVP++
Sbjct: 120 FVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTG--SQIADISMRKIYVANVPFD 177

Query: 654 MPSDRLLGYFLSYGEIEEGPLGFDKVTGKSKGFALFVYKTADGARAALVEPIKNIDGVQL 833
           MP+DRLL +F++YG++EEGPLGFDKVTGKS+GFALFVYKTA+GA+AAL +P+K IDG  L
Sbjct: 178 MPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHL 237

Query: 834 NCKMAIDXXXXXXXXSVGVQ------GEVHGNGVGL 923
           NCK+A+D            Q      G VHG G+G+
Sbjct: 238 NCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGM 273


>ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
           lyrata] gi|297328748|gb|EFH59167.1| hypothetical protein
           ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata]
          Length = 404

 Score =  314 bits (805), Expect = 4e-83
 Identities = 164/277 (59%), Positives = 205/277 (74%), Gaps = 16/277 (5%)
 Frame = +3

Query: 141 MDLAKKRKLDENG---------LLQPIFDLSVADVRKIIDSFTQDQLLDIVQNAAVRHLD 293
           MD+ KKRKLDENG         ++ P   L+  D RKII+ FT DQLLD++Q A VRH D
Sbjct: 1   MDMMKKRKLDENGGGLITNGGGIIGPT-RLTPQDARKIIERFTTDQLLDLLQEAIVRHPD 59

Query: 294 VLDAVRSIADQDLSQRKLFIRGLGWDTTNENLAAVFSAYGELDEAVVILDKATGKSKGFG 473
           VLD+VRS AD D+SQRKLFIRGL  DTT E L ++FS YG+L+EA+VILDK TGKSKG+G
Sbjct: 60  VLDSVRSTADSDISQRKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYG 119

Query: 474 FLTFKHIDGAVRALKEPSKKIDGRMTVTNLASAXXXXXXVMQQPVDVSMRKIYVANVPYE 653
           F+TF H+DGA+ ALKEPSKKIDGR+TVT LA++         Q  D+SMRKIYVANVP++
Sbjct: 120 FVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTG--SQIADISMRKIYVANVPFD 177

Query: 654 MPSDRLLGYFLSYGEIEEGPLGFDKVTGKSKGFALFVYKTADGARAALVEPIKNIDGVQL 833
           MP+DRLL +F++YG++EEGPLGFDKVTGKS+GFALFVYKTA+GA+ AL +P+K IDG  L
Sbjct: 178 MPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHL 237

Query: 834 NCKMAIDXXXXXXXXSV-------GVQGEVHGNGVGL 923
           NCK+A+D         +          G VHG+ +G+
Sbjct: 238 NCKLAVDGKKGGGKPGMPQAQDGGSGHGHVHGDVMGM 274


>ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 425

 Score =  313 bits (803), Expect = 7e-83
 Identities = 157/242 (64%), Positives = 199/242 (82%), Gaps = 5/242 (2%)
 Frame = +3

Query: 141 MDLAKKRKLDENGL-----LQPIFDLSVADVRKIIDSFTQDQLLDIVQNAAVRHLDVLDA 305
           MD  KKRKLDENG        P+  LS ++VRK+I+ FT DQLLDI+Q+A  RHLDVL A
Sbjct: 1   MDPTKKRKLDENGFNNNDSSDPL-KLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAA 59

Query: 306 VRSIADQDLSQRKLFIRGLGWDTTNENLAAVFSAYGELDEAVVILDKATGKSKGFGFLTF 485
           VR++AD D+SQRKLFIRGLGWDTT + L ++FS +G+L+EAVVILDKATGKSKG+GF+TF
Sbjct: 60  VRAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTF 119

Query: 486 KHIDGAVRALKEPSKKIDGRMTVTNLASAXXXXXXVMQQPVDVSMRKIYVANVPYEMPSD 665
           +H+DGA+ AL+EPSK+IDGR+TVT LA+A      V   P DV++RKIYVANVP ++P+D
Sbjct: 120 RHVDGALLALREPSKRIDGRVTVTQLAAAGNSASNV--NPADVALRKIYVANVPPDLPAD 177

Query: 666 RLLGYFLSYGEIEEGPLGFDKVTGKSKGFALFVYKTADGARAALVEPIKNIDGVQLNCKM 845
           +LL +F  YGEIEEGPLGFDK TGKSKGFALFVYK+ +GA+AAL++P+K ++G QL+CK+
Sbjct: 178 KLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKL 237

Query: 846 AI 851
           AI
Sbjct: 238 AI 239