BLASTX nr result

ID: Bupleurum21_contig00000564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000564
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY78522.2| chloroplast Fe superoxide dismutase [Prunus persi...   382   e-104
gb|AFG19618.1| iron superoxide dismutase 2, partial [Litchi chin...   381   e-103
ref|XP_002280522.1| PREDICTED: superoxide dismutase [Fe], chloro...   380   e-103
gb|AFG22595.1| chloroplast Fe-superoxide dismutase 1B-a [Prunus ...   380   e-103
gb|AFH08803.1| chloroplast Fe-superoxide dismutase 2A-a [Prunus ...   377   e-102

>gb|AEY78522.2| chloroplast Fe superoxide dismutase [Prunus persica]
            gi|383386077|gb|AFH08802.1| chloroplast Fe-superoxide
            dismutase 1A-a [Prunus persica]
            gi|383386081|gb|AFH08804.1| chloroplast Fe-superoxide
            dismutase 2B-a [Prunus persica]
          Length = 319

 Score =  382 bits (982), Expect = e-104
 Identities = 186/274 (67%), Positives = 219/274 (79%), Gaps = 11/274 (4%)
 Frame = -3

Query: 1185 SPAKMAATSTASL-----LTCPFLPI-QVFRGS---SRSLVWKNKQKQCNRRAG--IVTA 1039
            +P  +A  +T++L     LTC  +P  Q  RGS   +RSL W  KQ+QC R+AG   VTA
Sbjct: 3    APVAVAVAATSALAKPSSLTCALVPSWQGLRGSLGPARSLQWPKKQRQCRRKAGGTSVTA 62

Query: 1038 KIELKPPPYTLNALEPHMSKETLEYHWGRHHRGYVDNLNKQIIGTELDGLTLEGVVLGSY 859
            + +LKPPPY L+ALEPHMSKETLEYHWG+HHRGYVDNLNK I GTELD L+LE ++L +Y
Sbjct: 63   QFKLKPPPYPLDALEPHMSKETLEYHWGKHHRGYVDNLNKLIAGTELDELSLEDIILATY 122

Query: 858  NKGDILPAFNNAAQTWNHEFFWEXXXXXXXXXXXGDLLRLINRDFGSFSAFVEEFKLAAS 679
            NKGD+LP FN+AAQ WNH+FFWE           G+LL LINRDFGSF  F+EE + AA+
Sbjct: 123  NKGDLLPPFNHAAQIWNHDFFWESMKPGGGGKPSGELLELINRDFGSFERFIEELRSAAA 182

Query: 678  TQFGSGWAWLAYKANRLDVGNAVNPLPSEEDKKLVVVKSPNAVNPLVWDYFPLLTIDVWE 499
            TQFGSGWAWLAYKANRLDVGNAVNP PS+EDK+LVVVKSPNAVNPL+WDY PLLTIDVWE
Sbjct: 183  TQFGSGWAWLAYKANRLDVGNAVNPKPSDEDKRLVVVKSPNAVNPLIWDYSPLLTIDVWE 242

Query: 498  HSYYIDYENRRGEYISTFIEKLVSWETVSSRLEI 397
            H+YY+D++NRR +YIS F+EKLVSWE VSSRLEI
Sbjct: 243  HAYYLDFQNRRADYISIFLEKLVSWEAVSSRLEI 276


>gb|AFG19618.1| iron superoxide dismutase 2, partial [Litchi chinensis]
          Length = 285

 Score =  381 bits (979), Expect = e-103
 Identities = 186/274 (67%), Positives = 218/274 (79%), Gaps = 11/274 (4%)
 Frame = -3

Query: 1185 SPAKMAATSTASL-----LTCPFLPI-QVFRGS---SRSLVWKNKQKQCNRRAG--IVTA 1039
            +P  +A  +T++L     LTC  +P  Q  RGS   +RSL W  KQ+QC R+AG   VTA
Sbjct: 3    APVAVAVAATSALAKHSSLTCALVPSWQGLRGSLGPARSLQWPKKQRQCRRKAGGTSVTA 62

Query: 1038 KIELKPPPYTLNALEPHMSKETLEYHWGRHHRGYVDNLNKQIIGTELDGLTLEGVVLGSY 859
            + ELKPPPY L+ALEPHMSKETLEYHWG+HHRGYVDNLNK I GTELD L+LE ++L +Y
Sbjct: 63   QFELKPPPYPLDALEPHMSKETLEYHWGKHHRGYVDNLNKLIAGTELDELSLEDIILATY 122

Query: 858  NKGDILPAFNNAAQTWNHEFFWEXXXXXXXXXXXGDLLRLINRDFGSFSAFVEEFKLAAS 679
            NKGD+LP FN+AAQ WNH+FFWE           G+LL LINRDFGSF  F+EE + AA+
Sbjct: 123  NKGDLLPPFNHAAQIWNHDFFWESMKPGGGGKPSGELLELINRDFGSFERFIEELRSAAA 182

Query: 678  TQFGSGWAWLAYKANRLDVGNAVNPLPSEEDKKLVVVKSPNAVNPLVWDYFPLLTIDVWE 499
            TQFGSGWAWLAYKANR DVGNAVNP PS+EDK+LVVVKSPNAVNPL+WDY PLLTIDVWE
Sbjct: 183  TQFGSGWAWLAYKANRPDVGNAVNPKPSDEDKRLVVVKSPNAVNPLIWDYSPLLTIDVWE 242

Query: 498  HSYYIDYENRRGEYISTFIEKLVSWETVSSRLEI 397
            H+YY+D++NRR +YIS F+EKLVSWE VSSRLEI
Sbjct: 243  HAYYLDFQNRRADYISIFLEKLVSWEAVSSRLEI 276


>ref|XP_002280522.1| PREDICTED: superoxide dismutase [Fe], chloroplastic [Vitis vinifera]
            gi|297744964|emb|CBI38556.3| unnamed protein product
            [Vitis vinifera]
          Length = 306

 Score =  380 bits (977), Expect = e-103
 Identities = 182/261 (69%), Positives = 212/261 (81%), Gaps = 2/261 (0%)
 Frame = -3

Query: 1173 MAATSTASLLTCPFLPIQVFRGSSRSLVWKNKQKQCNRR--AGIVTAKIELKPPPYTLNA 1000
            M AT     L    LP Q ++ SSRSL+W+ K++ C+R+  + ++ AK ELKPPPY L+A
Sbjct: 1    MLATPAPVSLASALLPAQGWK-SSRSLLWRGKRRTCSRKGNSSLIIAKFELKPPPYPLSA 59

Query: 999  LEPHMSKETLEYHWGRHHRGYVDNLNKQIIGTELDGLTLEGVVLGSYNKGDILPAFNNAA 820
            LEPHMS+ETLEYHWG+HHRGYVDNLN+QI+GTELDG+TLE ++  +YNKGD+LPAFNNAA
Sbjct: 60   LEPHMSRETLEYHWGKHHRGYVDNLNRQIVGTELDGMTLEDIITITYNKGDLLPAFNNAA 119

Query: 819  QTWNHEFFWEXXXXXXXXXXXGDLLRLINRDFGSFSAFVEEFKLAASTQFGSGWAWLAYK 640
            Q WNH  FWE           GDLL LI RDFGSF  FVEEFKLAASTQFGSGWAWLAYK
Sbjct: 120  QVWNHTSFWESMKPGGGGEPSGDLLELIKRDFGSFERFVEEFKLAASTQFGSGWAWLAYK 179

Query: 639  ANRLDVGNAVNPLPSEEDKKLVVVKSPNAVNPLVWDYFPLLTIDVWEHSYYIDYENRRGE 460
            ANRLDVGNAVNP PSEEDKKLVVVKSPNA+NPL+WD  PLLTIDVWEH+YY+D++N R +
Sbjct: 180  ANRLDVGNAVNPRPSEEDKKLVVVKSPNAINPLLWDCNPLLTIDVWEHAYYLDFQNHRPD 239

Query: 459  YISTFIEKLVSWETVSSRLEI 397
            YIS F+EKLVSWE VSSRLE+
Sbjct: 240  YISIFMEKLVSWEAVSSRLEM 260


>gb|AFG22595.1| chloroplast Fe-superoxide dismutase 1B-a [Prunus persica]
            gi|383386087|gb|AFH08807.1| chloroplast Fe-superoxide
            dismutase 1B-b [Prunus persica]
          Length = 319

 Score =  380 bits (976), Expect = e-103
 Identities = 185/274 (67%), Positives = 218/274 (79%), Gaps = 11/274 (4%)
 Frame = -3

Query: 1185 SPAKMAATSTASL-----LTCPFLPI-QVFRGS---SRSLVWKNKQKQCNRRAG--IVTA 1039
            +P  +A  +T++L     LTC  +P  Q  RGS   +RSL W  KQ+QC R+AG   VTA
Sbjct: 3    APVAVAVAATSALAKPSSLTCALVPSWQGLRGSLGPARSLQWPKKQRQCRRKAGGTSVTA 62

Query: 1038 KIELKPPPYTLNALEPHMSKETLEYHWGRHHRGYVDNLNKQIIGTELDGLTLEGVVLGSY 859
            + +LKPPPY L+ALEPHMSKETLEYHWG+HHRGYVDNLNK I GTELD L+LE ++L +Y
Sbjct: 63   QFKLKPPPYPLDALEPHMSKETLEYHWGKHHRGYVDNLNKLIAGTELDELSLEDIILATY 122

Query: 858  NKGDILPAFNNAAQTWNHEFFWEXXXXXXXXXXXGDLLRLINRDFGSFSAFVEEFKLAAS 679
            NKGD+LP FN+AAQ WNH+FFWE           G+LL LINRDFGSF  F+EE + AA+
Sbjct: 123  NKGDLLPPFNHAAQIWNHDFFWESMKPGGGGKPSGELLELINRDFGSFERFIEELRSAAA 182

Query: 678  TQFGSGWAWLAYKANRLDVGNAVNPLPSEEDKKLVVVKSPNAVNPLVWDYFPLLTIDVWE 499
            TQFGSGWAWLAYKANRLDVGNAVNP PS+EDK+LVVVKSPNAVNPL+WDY PLLTIDVWE
Sbjct: 183  TQFGSGWAWLAYKANRLDVGNAVNPKPSDEDKRLVVVKSPNAVNPLIWDYSPLLTIDVWE 242

Query: 498  HSYYIDYENRRGEYISTFIEKLVSWETVSSRLEI 397
            H+YY+D++NRR +YIS F+EKLVSWE VS RLEI
Sbjct: 243  HAYYLDFQNRRADYISIFLEKLVSWEAVSFRLEI 276


>gb|AFH08803.1| chloroplast Fe-superoxide dismutase 2A-a [Prunus persica]
            gi|383386083|gb|AFH08805.1| chloroplast Fe-superoxide
            dismutase 2C-a [Prunus persica]
          Length = 320

 Score =  377 bits (969), Expect = e-102
 Identities = 186/275 (67%), Positives = 219/275 (79%), Gaps = 12/275 (4%)
 Frame = -3

Query: 1185 SPAKMAATSTASL-----LTCPFLPI-QVFRGS---SRSLVW-KNKQKQCNRRAG--IVT 1042
            +P  +A  +T++L     LTC  +P  Q  RGS   +RSL W K +Q+QC R+AG   VT
Sbjct: 3    APVAVAVAATSALAKPSSLTCALVPSWQGLRGSLGPARSLQWPKKQQRQCRRKAGGTSVT 62

Query: 1041 AKIELKPPPYTLNALEPHMSKETLEYHWGRHHRGYVDNLNKQIIGTELDGLTLEGVVLGS 862
            A+ ELKPPPY L+ALEPHMSKETLEYHWG+HHRGYVDNLNK I GTELD L+L  ++L +
Sbjct: 63   AQFELKPPPYPLDALEPHMSKETLEYHWGKHHRGYVDNLNKLIAGTELDELSLGDIILAT 122

Query: 861  YNKGDILPAFNNAAQTWNHEFFWEXXXXXXXXXXXGDLLRLINRDFGSFSAFVEEFKLAA 682
            YNKGD+LP FN+AAQ WNH+FFWE           G+LL LINRDFGSF  F+EE + AA
Sbjct: 123  YNKGDLLPPFNHAAQIWNHDFFWESMKPGGGGKPSGELLELINRDFGSFERFIEELRSAA 182

Query: 681  STQFGSGWAWLAYKANRLDVGNAVNPLPSEEDKKLVVVKSPNAVNPLVWDYFPLLTIDVW 502
            +TQFGSGWAWLAYKANRLDVGNAVNP PS+EDK+LVVVKSPNAVNPL+WDY PLLTIDVW
Sbjct: 183  ATQFGSGWAWLAYKANRLDVGNAVNPKPSDEDKRLVVVKSPNAVNPLIWDYSPLLTIDVW 242

Query: 501  EHSYYIDYENRRGEYISTFIEKLVSWETVSSRLEI 397
            EH+YY+D++NRR +YIS F+EKLVSWE VSSRLEI
Sbjct: 243  EHAYYLDFQNRRADYISIFLEKLVSWEAVSSRLEI 277


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