BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000554
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, puta...   105   3e-21
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   101   5e-20
emb|CBI28025.3| unnamed protein product [Vitis vinifera]               96   4e-18
gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|A...    94   1e-17
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    94   1e-17

>ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, putative [Ricinus communis]
           gi|223546708|gb|EEF48206.1| RING-H2 finger protein ATL4J
           precursor, putative [Ricinus communis]
          Length = 267

 Score =  105 bits (263), Expect = 3e-21
 Identities = 61/117 (52%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   ARSSRGSSFRNS---IRKEEEVPIEEICANNEDTEE-ILHKLNHKIIVSDVALLKNRWSS 168
           +R S GSSFR +   + K+EE  I+E  A + D E+ +LHK NHKII+SDV +LKNRWS+
Sbjct: 43  SRFSIGSSFRRTDKVLNKDEEALIQEQEAEDSDDEQRVLHKFNHKIIISDV-VLKNRWSN 101

Query: 169 VTSSDLMFLNSEMINEVCSTRFSLKEVKYETFGSTEGGLELMRGQEEMERKKLFEHK 339
           V+SSDLMFLN+EM+ ++ S RFS  +   E F STE   ++++ +EEME+K+LFE K
Sbjct: 102 VSSSDLMFLNAEMLQDMSSNRFSSSDSNNEQFISTENE-QMVKIKEEMEKKRLFESK 157


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  101 bits (252), Expect = 5e-20
 Identities = 58/116 (50%), Positives = 83/116 (71%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   ARSSRGSSFRN---SIRKEEEVPIEEICANNEDTEEILHKLNHKIIVSDVALLKNRWSSV 171
           +R S GSSFR     +++EE V I+E   +N+D E+ILHK+NHKIIVSDV +LKNRWSSV
Sbjct: 204 SRFSIGSSFRKVEKGVKEEESVLIQEEEDDNDD-EKILHKINHKIIVSDV-VLKNRWSSV 261

Query: 172 TSSDLMFLNSEMINEVCSTRFSLKEVKYETFGSTEGGLELMRGQEEMERKKLFEHK 339
           +SSDLM+LNSE+++ + S RF+  +      G      E+M+ +EE+ERK++FE +
Sbjct: 262 SSSDLMYLNSELVHAMSSDRFASLDSNNSAMGRPIEDWEVMKIKEEIERKRIFESR 317


>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/101 (50%), Positives = 75/101 (74%)
 Frame = +1

Query: 37  IRKEEEVPIEEICANNEDTEEILHKLNHKIIVSDVALLKNRWSSVTSSDLMFLNSEMINE 216
           +++EE V I+E   +N+D E+ILHK+NHKIIVSDV +LKNRWSSV+SSDLM+LNSE+++ 
Sbjct: 241 VKEEESVLIQEEEDDNDD-EKILHKINHKIIVSDV-VLKNRWSSVSSSDLMYLNSELVHA 298

Query: 217 VCSTRFSLKEVKYETFGSTEGGLELMRGQEEMERKKLFEHK 339
           + S RF+  +      G      E+M+ +EE+ERK++FE +
Sbjct: 299 MSSDRFASLDSNNSAMGRPIEDWEVMKIKEEIERKRIFESR 339


>gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|AAV43780.1|
           At4g28890 [Arabidopsis thaliana]
          Length = 386

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/117 (47%), Positives = 81/117 (69%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   ARSSRGSSFRNSIR---KEEEVPIEEICANNEDTEEILHKLNHKIIVSDVALLKNRWSSV 171
           +R S G SFR  ++   KE+ +  E +  N++D ++++HK NH+I+VSDV + KNRWS+V
Sbjct: 173 SRFSIGESFRKILKLGNKEKTLLDEHV--NDKDEKKLMHKFNHRIVVSDV-VFKNRWSNV 229

Query: 172 TSSDLMFLNSEMINEVCSTRF-SLKEVKYETFGSTEGGLELMRGQEEMERKKLFEHK 339
           +SSDLMFLNSEM+N + S RF SL  VK    G  E  + ++R +EEME K++ E+K
Sbjct: 230 SSSDLMFLNSEMVNSISSERFSSLDHVKR---GDEEDQIGILRIKEEMEAKRMLENK 283


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 57/118 (48%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
 Frame = +1

Query: 1   ARSSRGSSFRNSIR--KEEEVPIEEICANNEDTEEILHKLNHKIIVSDVALLKNRWSSVT 174
           +R S GSSFR + +  KEEE  IE+   +++  ++  HK NH+I +SDV + K+RWS+V+
Sbjct: 202 SRFSFGSSFRKTGKYVKEEEFLIEKGAEDSDGNQKGYHKHNHRITISDV-VFKHRWSNVS 260

Query: 175 SSDLMFLNSEMINEVCSTRFSLKEVKYETFGSTEGGLE---LMRGQEEMERKKLFEHK 339
           SSDLMFLNSEM+N+  S RFS  E   +   ST G +E   +M  +EEMERK  FE K
Sbjct: 261 SSDLMFLNSEMLNDASSNRFSNLESNADMMSSTRGVVENEQIMNIKEEMERKISFESK 318