BLASTX nr result

ID: Bupleurum21_contig00000541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000541
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34823.1|EF1A2_DAUCA RecName: Full=Elongation factor 1-alpha;...   432   e-119
ref|XP_002326338.1| predicted protein [Populus trichocarpa] gi|1...   424   e-117
gb|ACR38047.1| unknown [Zea mays] gi|413944974|gb|AFW77623.1| el...   420   e-115
gb|ACG25290.1| elongation factor 1-alpha [Zea mays] gi|413944947...   419   e-115
gb|AFW81463.1| putative translation elongation factor Tu family ...   419   e-115

>sp|P34823.1|EF1A2_DAUCA RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
           gi|217913|dbj|BAA02205.1| elongation factor 1-alpha
           [Daucus carota]
          Length = 447

 Score =  432 bits (1110), Expect = e-119
 Identities = 213/215 (99%), Positives = 214/215 (99%)
 Frame = -3

Query: 646 TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL 467
           TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL
Sbjct: 158 TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL 217

Query: 466 EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 287
           EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGP+GLTTEV
Sbjct: 218 EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPSGLTTEV 277

Query: 286 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH 107
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH 337

Query: 106 PGQIGNGYAPVLDCHTCHIAVKFAEIQTKIDRRSG 2
           PGQIGNGYAPVLDCHT HIAVKFAEIQTKIDRRSG
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFAEIQTKIDRRSG 372


>ref|XP_002326338.1| predicted protein [Populus trichocarpa] gi|118487793|gb|ABK95720.1|
           unknown [Populus trichocarpa]
           gi|222833531|gb|EEE72008.1| predicted protein [Populus
           trichocarpa]
          Length = 447

 Score =  424 bits (1089), Expect = e-117
 Identities = 205/215 (95%), Positives = 213/215 (99%)
 Frame = -3

Query: 646 TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL 467
           TTPKYSKSRF+EIVKEVSSYLKKVGYNPDKI F+PISGFEGDNMI+RSTNLDWYKGPTLL
Sbjct: 158 TTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL 217

Query: 466 EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 287
           +ALDQISEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGPTGLTTEV
Sbjct: 218 DALDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEV 277

Query: 286 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH 107
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAKEAANFT+QVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNH 337

Query: 106 PGQIGNGYAPVLDCHTCHIAVKFAEIQTKIDRRSG 2
           PGQIGNGYAPVLDCHTCHIAVKFAEI TKIDRRSG
Sbjct: 338 PGQIGNGYAPVLDCHTCHIAVKFAEILTKIDRRSG 372


>gb|ACR38047.1| unknown [Zea mays] gi|413944974|gb|AFW77623.1| elongation factor
           alpha1 [Zea mays]
          Length = 447

 Score =  420 bits (1079), Expect = e-115
 Identities = 204/215 (94%), Positives = 213/215 (99%)
 Frame = -3

Query: 646 TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL 467
           TTPKYSK+R++EIVKEVSSYLKKVGYNPDKIAF+PISGFEGDNMI+RSTNLDWYKGPTLL
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLL 217

Query: 466 EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 287
           EALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV
Sbjct: 218 EALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 277

Query: 286 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH 107
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAA+FT+QVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNH 337

Query: 106 PGQIGNGYAPVLDCHTCHIAVKFAEIQTKIDRRSG 2
           PGQIGNGYAPVLDCHT HIAVKFAE+ TKIDRRSG
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSG 372


>gb|ACG25290.1| elongation factor 1-alpha [Zea mays] gi|413944947|gb|AFW77596.1|
           putative translation elongation factor Tu family protein
           [Zea mays] gi|413944950|gb|AFW77599.1| putative
           translation elongation factor Tu family protein isoform
           1 [Zea mays] gi|413944951|gb|AFW77600.1| putative
           translation elongation factor Tu family protein isoform
           2 [Zea mays]
          Length = 447

 Score =  419 bits (1078), Expect = e-115
 Identities = 204/215 (94%), Positives = 213/215 (99%)
 Frame = -3

Query: 646 TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL 467
           TTPKYSK+R+EEIVKEVSSYLKKVGYNPDKIAF+PISGFEGDNMI+RSTNLDWYKGPTLL
Sbjct: 158 TTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLL 217

Query: 466 EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 287
           EALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV
Sbjct: 218 EALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 277

Query: 286 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH 107
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAKEAA+FT+QVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAASFTSQVIIMNH 337

Query: 106 PGQIGNGYAPVLDCHTCHIAVKFAEIQTKIDRRSG 2
           PGQIGNGYAPVLDCHT HIAVKFAE+ TKIDRRSG
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSG 372


>gb|AFW81463.1| putative translation elongation factor Tu family protein isoform 1
           [Zea mays] gi|413948815|gb|AFW81464.1| putative
           translation elongation factor Tu family protein isoform
           2 [Zea mays] gi|413948816|gb|AFW81465.1| putative
           translation elongation factor Tu family protein isoform
           3 [Zea mays]
          Length = 447

 Score =  419 bits (1077), Expect = e-115
 Identities = 203/215 (94%), Positives = 213/215 (99%)
 Frame = -3

Query: 646 TTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLL 467
           TTPKYSK+R++EIVKEVSSYLKKVGYNPDKIAF+PISGFEGDNMI+RSTNLDWYKGPTLL
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLL 217

Query: 466 EALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 287
           EALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV
Sbjct: 218 EALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEV 277

Query: 286 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNH 107
           KSVEMHHEALQEALPGDNVGFNVKNVAVKD+KRGYVASNSKDDPAKEAA+FT+QVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDIKRGYVASNSKDDPAKEAASFTSQVIIMNH 337

Query: 106 PGQIGNGYAPVLDCHTCHIAVKFAEIQTKIDRRSG 2
           PGQIGNGYAPVLDCHT HIAVKFAE+ TKIDRRSG
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSG 372


Top