BLASTX nr result

ID: Bupleurum21_contig00000539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000539
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602518.1| Splicing factor-like protein [Medicago trunc...   179   3e-43
ref|XP_003602517.1| Splicing factor-like protein [Medicago trunc...   179   3e-43
emb|CAC10207.1| putative splicing factor [Cicer arietinum]            174   9e-42
ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glyc...   173   1e-41
ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glyc...   170   1e-40

>ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
           gi|355491566|gb|AES72769.1| Splicing factor-like protein
           [Medicago truncatula]
          Length = 766

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/107 (75%), Positives = 94/107 (87%)
 Frame = -3

Query: 434 MLAPMVAEPIGTPSECLLLKNMFDPATEEEPDFDLDIKEDVHEECSKYGHIKHIYVDKNS 255
           ++   VAEP+GTPS CLLLKNMFDP TE EPDFDLDIKEDV EECSKYG +KHIYVDKNS
Sbjct: 658 IMPTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNS 717

Query: 254 AGYVYLRFDSVEGASRAQQAMHKRWFARRSISAIFLQPYEYDAKFKG 114
           AG+VYL F++VE AS AQ+AMH RWFAR+ ISAI++QP+EY+AKFKG
Sbjct: 718 AGFVYLMFETVEAASAAQRAMHMRWFARKMISAIYMQPHEYEAKFKG 764


>ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
           gi|355491565|gb|AES72768.1| Splicing factor-like protein
           [Medicago truncatula]
          Length = 731

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/107 (75%), Positives = 94/107 (87%)
 Frame = -3

Query: 434 MLAPMVAEPIGTPSECLLLKNMFDPATEEEPDFDLDIKEDVHEECSKYGHIKHIYVDKNS 255
           ++   VAEP+GTPS CLLLKNMFDP TE EPDFDLDIKEDV EECSKYG +KHIYVDKNS
Sbjct: 623 IMPTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNS 682

Query: 254 AGYVYLRFDSVEGASRAQQAMHKRWFARRSISAIFLQPYEYDAKFKG 114
           AG+VYL F++VE AS AQ+AMH RWFAR+ ISAI++QP+EY+AKFKG
Sbjct: 683 AGFVYLMFETVEAASAAQRAMHMRWFARKMISAIYMQPHEYEAKFKG 729


>emb|CAC10207.1| putative splicing factor [Cicer arietinum]
          Length = 392

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/102 (77%), Positives = 91/102 (89%)
 Frame = -3

Query: 419 VAEPIGTPSECLLLKNMFDPATEEEPDFDLDIKEDVHEECSKYGHIKHIYVDKNSAGYVY 240
           V EP+G PSECLLLKNMFDP+TE EPDFDLDIKEDV EECSKYG +KHIYVDK SAG+VY
Sbjct: 289 VVEPVGVPSECLLLKNMFDPSTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVY 348

Query: 239 LRFDSVEGASRAQQAMHKRWFARRSISAIFLQPYEYDAKFKG 114
           LRF++VE +S AQ+AMH RWFARR I+AIF+QP+ Y+AKFKG
Sbjct: 349 LRFETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEAKFKG 390


>ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 554

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = -3

Query: 419 VAEPIGTPSECLLLKNMFDPATEEEPDFDLDIKEDVHEECSKYGHIKHIYVDKNSAGYVY 240
           V EP+G PSECLLLKNMFDP+TE EPDFD+DIKEDV EECSKYG +KHI+VDK SAG+VY
Sbjct: 451 VVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSAGFVY 510

Query: 239 LRFDSVEGASRAQQAMHKRWFARRSISAIFLQPYEYDAKFKGVV 108
           LRFD+VE AS AQ AMH RWFARR ISA+F+QP  Y+AKFKG V
Sbjct: 511 LRFDTVEAASAAQHAMHLRWFARRLISAVFMQPELYEAKFKGEV 554


>ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 550

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/102 (75%), Positives = 90/102 (88%)
 Frame = -3

Query: 413 EPIGTPSECLLLKNMFDPATEEEPDFDLDIKEDVHEECSKYGHIKHIYVDKNSAGYVYLR 234
           EP+G PS+CLLLKNMFDP+TE EPDFD+DIKEDV EECSKYG +KHI+VDK S+G+VYLR
Sbjct: 449 EPVGNPSDCLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSSGFVYLR 508

Query: 233 FDSVEGASRAQQAMHKRWFARRSISAIFLQPYEYDAKFKGVV 108
           FD+VE AS AQ+AMH RWFARR ISA+F+QP  Y+AKFKG V
Sbjct: 509 FDTVEAASGAQRAMHMRWFARRLISAVFMQPELYEAKFKGEV 550


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