BLASTX nr result

ID: Bupleurum21_contig00000511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000511
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japo...   179   3e-43
gb|EEC82174.1| hypothetical protein OsI_26284 [Oryza sativa Indi...   179   3e-43
ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 h...   178   4e-43
ref|XP_002281891.1| PREDICTED: protein translation factor SUI1 h...   178   4e-43
gb|AFW78548.1| protein translation factor SUI1 [Zea mays]             177   6e-43

>gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japonica Group]
          Length = 230

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/102 (87%), Positives = 93/102 (91%), Gaps = 2/102 (1%)
 Frame = +3

Query: 111 CQVH*PSFMSELDIQIPNAFDPFAEATAEDS--SAGSKEYVHIRIQQRNGRKSLTTVQGL 284
           C  H  SFMS+LDIQIP AFDPFAEA A DS  +AGSK+YVH+RIQQRNGRKSLTTVQGL
Sbjct: 108 CHFHQQSFMSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL 167

Query: 285 KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 410
           KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN
Sbjct: 168 KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 209


>gb|EEC82174.1| hypothetical protein OsI_26284 [Oryza sativa Indica Group]
          Length = 843

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/102 (87%), Positives = 93/102 (91%), Gaps = 2/102 (1%)
 Frame = +3

Query: 111  CQVH*PSFMSELDIQIPNAFDPFAEATAEDS--SAGSKEYVHIRIQQRNGRKSLTTVQGL 284
            C  H  SFMS+LDIQIP AFDPFAEA A DS  +AGSK+YVH+RIQQRNGRKSLTTVQGL
Sbjct: 721  CHFHQQSFMSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL 780

Query: 285  KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 410
            KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN
Sbjct: 781  KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 822


>ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 homolog [Cucumis
           sativus]
          Length = 177

 Score =  178 bits (452), Expect = 4e-43
 Identities = 85/95 (89%), Positives = 91/95 (95%)
 Frame = +3

Query: 126 PSFMSELDIQIPNAFDPFAEATAEDSSAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYN 305
           PSFMSE ++QIP+AFDPFA+A AEDS AG+KEYVH+RIQQRNGRKS TTVQGLKKEFSYN
Sbjct: 62  PSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSPTTVQGLKKEFSYN 121

Query: 306 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 410
           KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN
Sbjct: 122 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 156


>ref|XP_002281891.1| PREDICTED: protein translation factor SUI1 homolog isoform 2 [Vitis
           vinifera] gi|225461085|ref|XP_002281872.1| PREDICTED:
           protein translation factor SUI1 homolog isoform 1 [Vitis
           vinifera] gi|297735962|emb|CBI23936.3| unnamed protein
           product [Vitis vinifera]
          Length = 113

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/92 (94%), Positives = 89/92 (96%)
 Frame = +3

Query: 135 MSELDIQIPNAFDPFAEATAEDSSAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKIL 314
           MSELDIQIP AFDPFAEA AEDS AGSK+YVHIRIQQRNGRKSLTTVQGL+KEFSYNKIL
Sbjct: 1   MSELDIQIPTAFDPFAEANAEDSGAGSKDYVHIRIQQRNGRKSLTTVQGLRKEFSYNKIL 60

Query: 315 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 410
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 92


>gb|AFW78548.1| protein translation factor SUI1 [Zea mays]
          Length = 185

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/97 (88%), Positives = 93/97 (95%), Gaps = 2/97 (2%)
 Frame = +3

Query: 126 PSFMSELDIQIPNAFDPFAEATAEDSSAG--SKEYVHIRIQQRNGRKSLTTVQGLKKEFS 299
           PSFMS+LD+Q+P+AFDPFAEA AEDS AG  +K+YVH+RIQQRNGRKSLTTVQGLKKEFS
Sbjct: 68  PSFMSDLDVQLPSAFDPFAEANAEDSGAGPGTKDYVHVRIQQRNGRKSLTTVQGLKKEFS 127

Query: 300 YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 410
           YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN
Sbjct: 128 YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN 164


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