BLASTX nr result

ID: Bupleurum21_contig00000396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000396
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32261.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   110   2e-22
ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus c...    96   6e-18
ref|XP_002320650.1| predicted protein [Populus trichocarpa] gi|2...    75   9e-12
ref|XP_002320364.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10

>emb|CBI32261.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  110 bits (275), Expect = 2e-22
 Identities = 59/128 (46%), Positives = 77/128 (60%)
 Frame = +1

Query: 7   FPPYEASDFQWCNDISEDAEESMNNTSFQSYFNTDYLVPDKNNEIDPSLHHDDNKRDTPS 186
           FP YEAS FQWC+D SE A + + +    S  +   LVP K+++I  S+ H +   +  S
Sbjct: 215 FPTYEASAFQWCSDGSEAANQVLPSVLLGSCADEKCLVPRKHSDIGGSVSHTNGSDEGKS 274

Query: 187 KNPIVAEASQIFPKVASHEFSSQHRDSAINXXXXXXXXXXXXXHIRYESRKVRAESRARI 366
           + P+V +     PKV+ HE +SQ RDSAI+             HIRYESRK RAESR RI
Sbjct: 275 ECPVVTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRI 334

Query: 367 KGRFAKVD 390
           KGRFAK+D
Sbjct: 335 KGRFAKMD 342


>ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform 1
           [Vitis vinifera]
          Length = 394

 Score =  110 bits (275), Expect = 2e-22
 Identities = 59/128 (46%), Positives = 77/128 (60%)
 Frame = +1

Query: 7   FPPYEASDFQWCNDISEDAEESMNNTSFQSYFNTDYLVPDKNNEIDPSLHHDDNKRDTPS 186
           FP YEAS FQWC+D SE A + + +    S  +   LVP K+++I  S+ H +   +  S
Sbjct: 266 FPTYEASAFQWCSDGSEAANQVLPSVLLGSCADEKCLVPRKHSDIGGSVSHTNGSDEGKS 325

Query: 187 KNPIVAEASQIFPKVASHEFSSQHRDSAINXXXXXXXXXXXXXHIRYESRKVRAESRARI 366
           + P+V +     PKV+ HE +SQ RDSAI+             HIRYESRK RAESR RI
Sbjct: 326 ECPVVTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRI 385

Query: 367 KGRFAKVD 390
           KGRFAK+D
Sbjct: 386 KGRFAKMD 393


>ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus communis]
           gi|223540063|gb|EEF41640.1| hypothetical protein
           RCOM_0555710 [Ricinus communis]
          Length = 411

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
 Frame = +1

Query: 10  PPYEASDFQWCNDISEDAEE-SMNNTSFQSYFNTDYLVPDKNNEIDPSLHHDDNKRDTPS 186
           P YE + F W +D  E   + S+  T  +S+     +VPDK + ID S  + +   +   
Sbjct: 283 PSYEENIFNWLSDNGEAGNQVSVPCTLPRSHLEESPVVPDKQSNIDGSASYANGSHEGEP 342

Query: 187 KNPIVAEASQIFPKVASHEFSSQHRDSAINXXXXXXXXXXXXXHIRYESRKVRAESRARI 366
           + P       +FPKV SH+ +SQ RDSAI+             HIRYESRK RAESR RI
Sbjct: 343 QYPASTGLISVFPKVVSHDINSQERDSAISRYKEKRKTRRYDKHIRYESRKARAESRTRI 402

Query: 367 KGRFAKVDR 393
           +GRFAK+DR
Sbjct: 403 RGRFAKMDR 411


>ref|XP_002320650.1| predicted protein [Populus trichocarpa] gi|222861423|gb|EEE98965.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 50/121 (41%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
 Frame = +1

Query: 37  WCNDISEDAEESMN-NTSFQSYFNTDYLVPDKN-NEIDPSLH-HDDNKRDTPSKNPIVAE 207
           W  D  E A + +  +T   S F     VPDK  N I  + H HDD+  +      +  E
Sbjct: 6   WLADYGEAANQVLFLSTLPSSNFEESCAVPDKEFNIIGSASHVHDDHAAEPQH---LTIE 62

Query: 208 ASQIFPKVASHEFSSQHRDSAINXXXXXXXXXXXXXHIRYESRKVRAESRARIKGRFAKV 387
                P V +HE +SQ RDSAI+             HIRYESRKVRAE R RI+GRFAK+
Sbjct: 63  TLPALPNVVTHELNSQERDSAISRYKEKKKTRRYSKHIRYESRKVRAEGRTRIRGRFAKM 122

Query: 388 D 390
           D
Sbjct: 123 D 123


>ref|XP_002320364.1| predicted protein [Populus trichocarpa] gi|222861137|gb|EEE98679.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
 Frame = +1

Query: 67  ESMNNTSFQSY-----FNTDYLVPDKNNEIDPSLHHDDNKRDTPSKNPIVAEASQIFPKV 231
           E+ N  SF S      F     VP+K   I  S  H ++  +   + P       + P  
Sbjct: 5   EAANQVSFPSTLPGSNFEESRAVPEKEFNISDSASHINDGHEAEPQ-PSTIGTLPVLPND 63

Query: 232 ASHEFSSQHRDSAINXXXXXXXXXXXXXHIRYESRKVRAESRARIKGRFAKVD 390
            +HE SSQ RDSAI+              IRYESRKVRA+SR RIKGRFAK+D
Sbjct: 64  GTHELSSQERDSAISRYKEKKQTRRYDKRIRYESRKVRADSRTRIKGRFAKLD 116


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