BLASTX nr result

ID: Bupleurum21_contig00000357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000357
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28590.1|ABRC_ABRPR RecName: Full=Abrin-c; Contains: RecName:...    95   5e-18
gb|AAB25435.1| abrin-b B-chain=toxic lectin [Abrus precatorius, ...    95   5e-18
sp|Q06076.1|ABRD_ABRPR RecName: Full=Abrin-d; Contains: RecName:...    95   7e-18
gb|AAB23029.1| abrin-a B chain=galactose-specific lectin [Abrus ...    94   9e-18
gb|ABW23506.1| prepropulchellin IV [Abrus pulchellus subsp. tenu...    94   1e-17

>sp|P28590.1|ABRC_ABRPR RecName: Full=Abrin-c; Contains: RecName: Full=Abrin-c A chain;
           AltName: Full=rRNA N-glycosidase; Contains: RecName:
           Full=Linker peptide; Contains: RecName: Full=Abrin-c B
           chain; Flags: Precursor gi|16085|emb|CAA39202.1|
           preproabrin [Abrus precatorius]
          Length = 562

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
 Frame = -1

Query: 522 QGWSFRNNTQSVVTPIFGYKGMCMQASSNNTVQLADC-SSKTVQEWAIYPDGTIRPSMST 346
           QGW   NNT   VT I GY  +CMQA  +N V LADC ++K  Q+WA+Y DG+IR   +T
Sbjct: 429 QGWRTGNNTSPFVTSISGYSDLCMQAQGSN-VWLADCDNNKKEQQWALYTDGSIRSVQNT 487

Query: 345 TNCLASKSSKDGKIVTQQLCDGGDA-ERWLFNHDRTISDVKNNYVLEVS-NDKKIK 184
            NCL SK  K G  +    C  G A +RWLF +D +I ++ ++ V++V  +D  +K
Sbjct: 488 NNCLTSKDHKQGSPIVLMACSNGWASQRWLFKNDGSIYNLHDDMVMDVKRSDPSLK 543


>gb|AAB25435.1| abrin-b B-chain=toxic lectin [Abrus precatorius, seeds, Peptide,
           268 aa] gi|444803|prf||1908235B abrin b:SUBUNIT=B chain
          Length = 268

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
 Frame = -1

Query: 522 QGWSFRNNTQSVVTPIFGYKGMCMQASSNNTVQLADC-SSKTVQEWAIYPDGTIRPSMST 346
           QGW   NNT   VT I GY  +CMQA  +N V +ADC S+K  Q+WA+Y DG+IR   +T
Sbjct: 135 QGWRTGNNTSPFVTSISGYSDLCMQAQGSN-VWMADCDSNKKEQQWALYTDGSIRSVQNT 193

Query: 345 TNCLASKSSKDGKIVTQQLCDGGDA-ERWLFNHDRTISDVKNNYVLEV-SNDKKIKLV 178
            NCL SK  K G  +    C  G A +RWLF +D +I  + ++ V++V  +D  +K +
Sbjct: 194 NNCLTSKDHKQGSPIVLMACSNGWASQRWLFKNDGSIYSLYDDMVMDVKGSDPSLKQI 251


>sp|Q06076.1|ABRD_ABRPR RecName: Full=Abrin-d; Contains: RecName: Full=Abrin-d A chain;
           AltName: Full=rRNA N-glycosidase; Contains: RecName:
           Full=Linker peptide; Contains: RecName: Full=Abrin-d B
           chain; Flags: Precursor gi|166299|gb|AAA32626.1|
           abrin-d, partial [Abrus precatorius]
          Length = 528

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
 Frame = -1

Query: 522 QGWSFRNNTQSVVTPIFGYKGMCMQASSNNTVQLADC-SSKTVQEWAIYPDGTIRPSMST 346
           QGW   NNT   VT I GY  +CMQA  +N V LADC ++K  Q+WA+Y DG+IR   +T
Sbjct: 395 QGWRTGNNTSPFVTSISGYSDLCMQAQGSN-VWLADCDNNKKEQQWALYTDGSIRSVQNT 453

Query: 345 TNCLASKSSKDGKIVTQQLCDGGDA-ERWLFNHDRTISDVKNNYVLEV-SNDKKIKLV 178
            NCL SK  K G  +    C  G A +RWLF +D +I  + ++ V++V  +D  +K +
Sbjct: 454 NNCLTSKDHKQGSPIVLMACSNGWASQRWLFKNDGSIYSLYDDMVMDVKGSDPSLKQI 511


>gb|AAB23029.1| abrin-a B chain=galactose-specific lectin [Abrus precatorius,
           Peptide, 267 aa]
          Length = 267

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
 Frame = -1

Query: 522 QGWSFRNNTQSVVTPIFGYKGMCMQASSNNTVQLADC-SSKTVQEWAIYPDGTIRPSMST 346
           QGW   NNT   VT I GY  +CMQA  +N V LADC S+K  Q+WA+Y DG+IR   +T
Sbjct: 134 QGWRTGNNTSPFVTSISGYSDLCMQAQGSN-VWLADCDSNKKEQQWALYTDGSIRSVQNT 192

Query: 345 TNCLASKSSKDGKIVTQQLCDGGDA-ERWLFNHDRTISDVKNNYVLEV-SNDKKIKLV 178
            NCL SK  K G  +    C  G A +RWLF +D +I  + ++ V++V  +D  +K +
Sbjct: 193 NNCLTSKDHKQGSPILLMGCSNGWASQRWLFKNDGSIYSLYDDMVMDVKGSDPSLKQI 250


>gb|ABW23506.1| prepropulchellin IV [Abrus pulchellus subsp. tenuiflorus]
          Length = 561

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
 Frame = -1

Query: 522 QGWSFRNNTQSVVTPIFGYKGMCMQASSNNTVQLADC-SSKTVQEWAIYPDGTIRPSMST 346
           QGW   N+T   VT I GY  +CM+A   N V +ADC S+K  Q+WA+YPDG+IRP  +T
Sbjct: 428 QGWRTGNDTSPFVTSIAGYSNLCMEAHGTN-VWMADCDSNKKEQQWALYPDGSIRPVQNT 486

Query: 345 TNCLASKSSKDGKIVTQQLCDGGDA-ERWLFNHDRTISDVKNNYVLEV-SNDKKIKLVKR 172
            NCL S   K G  +    C    A +RW+F +D TI ++ ++ V++V  +D  +K +  
Sbjct: 487 NNCLTSDEHKQGATIVMMGCSNAWASQRWVFRNDGTIYNLYDDMVMDVRRSDPSLKQIIL 546

Query: 171 SADTPTSKQIF 139
            + T    QI+
Sbjct: 547 WSYTGKPNQIW 557


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