BLASTX nr result

ID: Bupleurum21_contig00000322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000322
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143093.1| PREDICTED: probable histone H2B.1-like [Cucu...   195   3e-48
ref|XP_002284344.1| PREDICTED: probable histone H2B.1-like [Viti...   195   3e-48
ref|NP_172258.1| histone H2B [Arabidopsis thaliana] gi|75180188|...   194   5e-48
ref|XP_002284277.1| PREDICTED: probable histone H2B.1 isoform 1 ...   194   5e-48
sp|O65819.1|H2B3_SOLLC RecName: Full=Histone H2B.3; AltName: Ful...   194   5e-48

>ref|XP_004143093.1| PREDICTED: probable histone H2B.1-like [Cucumis sativus]
           gi|449508145|ref|XP_004163232.1| PREDICTED: probable
           histone H2B.1-like [Cucumis sativus]
          Length = 152

 Score =  195 bits (496), Expect = 3e-48
 Identities = 100/102 (98%), Positives = 101/102 (99%)
 Frame = +1

Query: 1   AGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLA 180
           AGDKKKKR KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLA
Sbjct: 50  AGDKKKKRTKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLA 109

Query: 181 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 306
           RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 110 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 151


>ref|XP_002284344.1| PREDICTED: probable histone H2B.1-like [Vitis vinifera]
          Length = 147

 Score =  195 bits (496), Expect = 3e-48
 Identities = 100/102 (98%), Positives = 101/102 (99%)
 Frame = +1

Query: 1   AGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLA 180
           AGDKKKKR KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LA
Sbjct: 45  AGDKKKKRTKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLA 104

Query: 181 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 306
           RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 105 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 146


>ref|NP_172258.1| histone H2B [Arabidopsis thaliana]
           gi|75180188|sp|Q9LQQ4.3|H2B1_ARATH RecName: Full=Histone
           H2B.1; Short=HTB1 gi|8439888|gb|AAF75074.1|AC007583_10
           Strong similarity to histone H2B like protein from
           Arabidopsis thaliana gb|Y07745. ESTs gb|R83948 and
           gb|T42349 come from this gene [Arabidopsis thaliana]
           gi|12083300|gb|AAG48809.1|AF332446_1 putative histone
           H2B protein [Arabidopsis thaliana]
           gi|17979526|gb|AAL50098.1| At1g07790/F24B9_10
           [Arabidopsis thaliana] gi|22137246|gb|AAM91468.1|
           At1g07790/F24B9_10 [Arabidopsis thaliana]
           gi|332190063|gb|AEE28184.1| histone H2B [Arabidopsis
           thaliana]
          Length = 148

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/102 (97%), Positives = 102/102 (100%)
 Frame = +1

Query: 1   AGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLA 180
           AGDKKKKR+KK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLA
Sbjct: 46  AGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLA 105

Query: 181 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 306
           RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 106 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 147


>ref|XP_002284277.1| PREDICTED: probable histone H2B.1 isoform 1 [Vitis vinifera]
           gi|147858650|emb|CAN78863.1| hypothetical protein
           VITISV_032908 [Vitis vinifera]
          Length = 152

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/102 (97%), Positives = 102/102 (100%)
 Frame = +1

Query: 1   AGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLA 180
           AGDKKKKR+KK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LA
Sbjct: 50  AGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLA 109

Query: 181 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 306
           RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 110 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 151


>sp|O65819.1|H2B3_SOLLC RecName: Full=Histone H2B.3; AltName: Full=LeH2B-3
           gi|3021485|emb|CAA12231.1| histone H2B-3 [Solanum
           lycopersicum]
          Length = 137

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/102 (97%), Positives = 102/102 (100%)
 Frame = +1

Query: 1   AGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLA 180
           AGDKKKKR+KK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LA
Sbjct: 35  AGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLA 94

Query: 181 RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 306
           RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 95  RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 136


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