BLASTX nr result

ID: Bupleurum21_contig00000238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000238
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279687.1| PREDICTED: omega-amidase NIT2-like [Vitis vi...   542   e-152
emb|CBI20702.3| unnamed protein product [Vitis vinifera]              541   e-151
ref|NP_196765.2| omega-amidase [Arabidopsis thaliana] gi|1971557...   525   e-147
ref|XP_002309478.1| predicted protein [Populus trichocarpa] gi|2...   525   e-147
ref|XP_002871509.1| carbon-nitrogen hydrolase family protein [Ar...   520   e-145

>ref|XP_002279687.1| PREDICTED: omega-amidase NIT2-like [Vitis vinifera]
          Length = 364

 Score =  542 bits (1396), Expect = e-152
 Identities = 265/310 (85%), Positives = 286/310 (92%)
 Frame = +3

Query: 27  SVRMASTFKPEQARVXXXXXXXXXXINKFKIGLCQLSVTADKERNIVHAQTAIKEAAEKG 206
           S  M+S+FKPEQARV          ++KFKIGLCQLSVTADKERNI HA+ AI+EA EKG
Sbjct: 55  SASMSSSFKPEQARVPPAIPPPTPPLSKFKIGLCQLSVTADKERNIAHARKAIEEAVEKG 114

Query: 207 AKLVVLPEIWNSPYSNDSFPVYAEDIDAGSNASPSTAMLSEVARTLKITIVGGSIPERCG 386
           A+LV+LPEIWNSPYSNDSFPVYAEDIDAGS+ASPSTAMLSEV+  LKITIVGGSIPERCG
Sbjct: 115 AQLVLLPEIWNSPYSNDSFPVYAEDIDAGSDASPSTAMLSEVSHALKITIVGGSIPERCG 174

Query: 387 DKLYNTCCVFDTDGKLKAKHRKIHLFDIDIPGKITFKESKTLTAGETPTIVDTEVGRIGI 566
           D+LYNTCCVF +DGKLKAKHRKIHLFDI+IPGKITF ESKTLTAG +PTIVDTEVGRIGI
Sbjct: 175 DQLYNTCCVFGSDGKLKAKHRKIHLFDINIPGKITFMESKTLTAGGSPTIVDTEVGRIGI 234

Query: 567 GICYDIRFQELAVIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPAR 746
           GICYDIRF ELA++YAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPAR
Sbjct: 235 GICYDIRFSELAMLYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPAR 294

Query: 747 DVGSGYVAWGHSTLVGPFGEVLATTEHEEAVIISEIDYSQLEMRRTNLPLQDQRRGDLYQ 926
           D G+GYVAWGHSTLVGPFGEVLATTEHEEA+IISEIDYS +E+RRTNLPL +QRRGDLYQ
Sbjct: 295 DAGAGYVAWGHSTLVGPFGEVLATTEHEEAIIISEIDYSLIELRRTNLPLLNQRRGDLYQ 354

Query: 927 LVDVQRLDSQ 956
           LVDVQRLDSQ
Sbjct: 355 LVDVQRLDSQ 364


>emb|CBI20702.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  541 bits (1393), Expect = e-151
 Identities = 264/307 (85%), Positives = 285/307 (92%)
 Frame = +3

Query: 36  MASTFKPEQARVXXXXXXXXXXINKFKIGLCQLSVTADKERNIVHAQTAIKEAAEKGAKL 215
           M+S+FKPEQARV          ++KFKIGLCQLSVTADKERNI HA+ AI+EA EKGA+L
Sbjct: 1   MSSSFKPEQARVPPAIPPPTPPLSKFKIGLCQLSVTADKERNIAHARKAIEEAVEKGAQL 60

Query: 216 VVLPEIWNSPYSNDSFPVYAEDIDAGSNASPSTAMLSEVARTLKITIVGGSIPERCGDKL 395
           V+LPEIWNSPYSNDSFPVYAEDIDAGS+ASPSTAMLSEV+  LKITIVGGSIPERCGD+L
Sbjct: 61  VLLPEIWNSPYSNDSFPVYAEDIDAGSDASPSTAMLSEVSHALKITIVGGSIPERCGDQL 120

Query: 396 YNTCCVFDTDGKLKAKHRKIHLFDIDIPGKITFKESKTLTAGETPTIVDTEVGRIGIGIC 575
           YNTCCVF +DGKLKAKHRKIHLFDI+IPGKITF ESKTLTAG +PTIVDTEVGRIGIGIC
Sbjct: 121 YNTCCVFGSDGKLKAKHRKIHLFDINIPGKITFMESKTLTAGGSPTIVDTEVGRIGIGIC 180

Query: 576 YDIRFQELAVIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPARDVG 755
           YDIRF ELA++YAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPARD G
Sbjct: 181 YDIRFSELAMLYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPARDAG 240

Query: 756 SGYVAWGHSTLVGPFGEVLATTEHEEAVIISEIDYSQLEMRRTNLPLQDQRRGDLYQLVD 935
           +GYVAWGHSTLVGPFGEVLATTEHEEA+IISEIDYS +E+RRTNLPL +QRRGDLYQLVD
Sbjct: 241 AGYVAWGHSTLVGPFGEVLATTEHEEAIIISEIDYSLIELRRTNLPLLNQRRGDLYQLVD 300

Query: 936 VQRLDSQ 956
           VQRLDSQ
Sbjct: 301 VQRLDSQ 307


>ref|NP_196765.2| omega-amidase [Arabidopsis thaliana] gi|19715574|gb|AAL91613.1|
           AT5g12040/F14F18_210 [Arabidopsis thaliana]
           gi|20147243|gb|AAM10335.1| AT5g12040/F14F18_210
           [Arabidopsis thaliana] gi|332004371|gb|AED91754.1|
           omega-amidase [Arabidopsis thaliana]
          Length = 369

 Score =  525 bits (1353), Expect = e-147
 Identities = 257/310 (82%), Positives = 280/310 (90%)
 Frame = +3

Query: 27  SVRMASTFKPEQARVXXXXXXXXXXINKFKIGLCQLSVTADKERNIVHAQTAIKEAAEKG 206
           S  MAS+F PEQARV          + KF IGLCQLSVT+DK+RNI HA+ AI+EAA KG
Sbjct: 60  SSSMASSFNPEQARVPSALPLPAPPLTKFNIGLCQLSVTSDKKRNISHAKKAIEEAASKG 119

Query: 207 AKLVVLPEIWNSPYSNDSFPVYAEDIDAGSNASPSTAMLSEVARTLKITIVGGSIPERCG 386
           AKLV+LPEIWNSPYSNDSFPVYAE+IDAG +ASPSTAMLSEV++ LKITI+GGSIPER G
Sbjct: 120 AKLVLLPEIWNSPYSNDSFPVYAEEIDAGGDASPSTAMLSEVSKRLKITIIGGSIPERVG 179

Query: 387 DKLYNTCCVFDTDGKLKAKHRKIHLFDIDIPGKITFKESKTLTAGETPTIVDTEVGRIGI 566
           D+LYNTCCVF +DG+LKAKHRKIHLFDIDIPGKITF ESKTLTAGETPTIVDT+VGRIGI
Sbjct: 180 DRLYNTCCVFGSDGELKAKHRKIHLFDIDIPGKITFMESKTLTAGETPTIVDTDVGRIGI 239

Query: 567 GICYDIRFQELAVIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPAR 746
           GICYDIRFQELA+IYAARGAHL+CYPGAFNMTTGPLHWELLQRARA DNQLYVATCSPAR
Sbjct: 240 GICYDIRFQELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 299

Query: 747 DVGSGYVAWGHSTLVGPFGEVLATTEHEEAVIISEIDYSQLEMRRTNLPLQDQRRGDLYQ 926
           D G+GY AWGHSTLVGPFGEVLATTEHEEA+II+EIDYS LE RRT+LPL  QRRGDLYQ
Sbjct: 300 DSGAGYTAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTSLPLNRQRRGDLYQ 359

Query: 927 LVDVQRLDSQ 956
           LVDVQRLDS+
Sbjct: 360 LVDVQRLDSK 369


>ref|XP_002309478.1| predicted protein [Populus trichocarpa] gi|222855454|gb|EEE93001.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  525 bits (1352), Expect = e-147
 Identities = 262/306 (85%), Positives = 275/306 (89%)
 Frame = +3

Query: 36  MASTFKPEQARVXXXXXXXXXXINKFKIGLCQLSVTADKERNIVHAQTAIKEAAEKGAKL 215
           MAS+F PEQAR           +  FKIGLCQLSVTADKERNI HA+ AI+EAA KGAKL
Sbjct: 66  MASSFMPEQARAPPALPLP---VPPFKIGLCQLSVTADKERNIAHARKAIEEAAAKGAKL 122

Query: 216 VVLPEIWNSPYSNDSFPVYAEDIDAGSNASPSTAMLSEVARTLKITIVGGSIPERCGDKL 395
           V+LPEIWNSPYSND FPVYAEDIDAG  ASPSTAMLSE A  LK+TIVGGSIPER GD+L
Sbjct: 123 VMLPEIWNSPYSNDCFPVYAEDIDAGGEASPSTAMLSEAAGLLKVTIVGGSIPERSGDRL 182

Query: 396 YNTCCVFDTDGKLKAKHRKIHLFDIDIPGKITFKESKTLTAGETPTIVDTEVGRIGIGIC 575
           YNTCCVFD+DGKLKAKHRKIHLFDIDIPGKITF ESKTLTAGETPTIVDTEVGRIGIGIC
Sbjct: 183 YNTCCVFDSDGKLKAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGIC 242

Query: 576 YDIRFQELAVIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPARDVG 755
           YDIRFQELA+IYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPARDV 
Sbjct: 243 YDIRFQELAIIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPARDVA 302

Query: 756 SGYVAWGHSTLVGPFGEVLATTEHEEAVIISEIDYSQLEMRRTNLPLQDQRRGDLYQLVD 935
           +GYVAWGHSTLVGPFGEVLATTEHEE +II+EIDYS LE+RRTNLPL  QRRGDLYQLVD
Sbjct: 303 AGYVAWGHSTLVGPFGEVLATTEHEEDIIIAEIDYSLLEVRRTNLPLTKQRRGDLYQLVD 362

Query: 936 VQRLDS 953
           VQRL S
Sbjct: 363 VQRLKS 368


>ref|XP_002871509.1| carbon-nitrogen hydrolase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317346|gb|EFH47768.1| carbon-nitrogen
           hydrolase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 365

 Score =  520 bits (1339), Expect = e-145
 Identities = 254/310 (81%), Positives = 279/310 (90%)
 Frame = +3

Query: 27  SVRMASTFKPEQARVXXXXXXXXXXINKFKIGLCQLSVTADKERNIVHAQTAIKEAAEKG 206
           S  MAS+F+PEQARV          + KF IGLCQLSVT+DK+RNI HA+ AI+EAA KG
Sbjct: 56  SSSMASSFQPEQARVPSALPLPAPPLTKFNIGLCQLSVTSDKKRNISHAKKAIEEAASKG 115

Query: 207 AKLVVLPEIWNSPYSNDSFPVYAEDIDAGSNASPSTAMLSEVARTLKITIVGGSIPERCG 386
           AKLV+LPEIWNSPYSNDSFPVYAEDIDAG +ASPSTAMLSEV++ L+ITI+GGSIPER G
Sbjct: 116 AKLVLLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVSKRLRITIIGGSIPERVG 175

Query: 387 DKLYNTCCVFDTDGKLKAKHRKIHLFDIDIPGKITFKESKTLTAGETPTIVDTEVGRIGI 566
           D+LYNTCCVF +DG+LKAKHRKIHLFDIDIPGKITF ESKTLTAGETPTIVDT+VGRIGI
Sbjct: 176 DRLYNTCCVFGSDGELKAKHRKIHLFDIDIPGKITFMESKTLTAGETPTIVDTDVGRIGI 235

Query: 567 GICYDIRFQELAVIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSPAR 746
           GICYDIRFQELA+IYAARGAHL+CYPGAFNMTTGPLHWELLQRARA DNQLYVATCSPAR
Sbjct: 236 GICYDIRFQELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 295

Query: 747 DVGSGYVAWGHSTLVGPFGEVLATTEHEEAVIISEIDYSQLEMRRTNLPLQDQRRGDLYQ 926
             G+GY AWGHSTLVGPFGEVLATTEHEE +II+EIDYS LE RRT+LPL  QRRGDLYQ
Sbjct: 296 GSGAGYTAWGHSTLVGPFGEVLATTEHEEDIIIAEIDYSVLEQRRTSLPLNKQRRGDLYQ 355

Query: 927 LVDVQRLDSQ 956
           LVDVQRL+S+
Sbjct: 356 LVDVQRLNSK 365


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