BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00043070
         (549 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    98   9e-39
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]    95   9e-39
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]    98   9e-39
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                        97   1e-38
gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]      94   1e-38
ref|XP_006605017.1| PREDICTED: uncharacterized protein LOC102660...    94   3e-38
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]                95   3e-38
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...    93   7e-38
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...    93   7e-38
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...    93   7e-38
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc...    92   7e-38
gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-...    92   1e-37
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc...    92   1e-37
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...    93   1e-37
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...    93   1e-37
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...    93   1e-37
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...    92   1e-37
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...    93   1e-37
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...    92   2e-37
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...    92   2e-37

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 97.8 bits (242), Expect(2) = 9e-39
 Identities = 44/88 (50%), Positives = 68/88 (77%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            ++ L  N+GE+++Q EY++II S+MY+++ TRPD+A ++G LSR+TSNPG  HW+ + RV
Sbjct: 1078 TLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRV 1137

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            L+YL+ TR+Y LHY    + L+ +SDAN
Sbjct: 1138 LKYLRFTRDYXLHYTRYPAVLEGYSDAN 1165



 Score = 88.6 bits (218), Expect(2) = 9e-39
 Identities = 44/89 (49%), Positives = 59/89 (66%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ K T    V+V LYVDD+LI GSD K +  TK  L   FD+KD+G  DVILG+K+ +
Sbjct: 984  CVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKR 1043

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCKDNT 268
                 IL+QSHY++K+L KF+    KDN+
Sbjct: 1044 TSNELILSQSHYVDKILGKFD----KDNS 1068


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score = 95.1 bits (235), Expect(2) = 9e-39
 Identities = 48/88 (54%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            ++ L  N G   +Q EY+ II S+MYV+N TR D+A S+  LSRFTSNPGE+HWK + RV
Sbjct: 1077 NLHLFKNTGIGKSQLEYSHIIGSLMYVMNCTRLDIAYSVSKLSRFTSNPGENHWKSIIRV 1136

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            L YLK T+NYGLH+    + L+ +SDAN
Sbjct: 1137 LGYLKYTQNYGLHFTRYPAVLEGYSDAN 1164



 Score = 91.3 bits (225), Expect(2) = 9e-39
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ K T +  V+V LYVDD+LI GSD   +  TK+ L   FD+KDLG  D+ILG+KV K
Sbjct: 983  CVYVKNTKKGYVIVCLYVDDMLIIGSDTNMIKMTKQMLSIRFDMKDLGVADIILGIKVSK 1042

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                 IL+Q HYIEK+L+KF  +D +
Sbjct: 1043 TSDGLILSQPHYIEKILEKFKKYDIR 1068


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 98.2 bits (243), Expect(2) = 9e-39
 Identities = 44/88 (50%), Positives = 68/88 (77%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            ++ L  N+GE+++Q EY++II S+MY+++ TRPD+A ++  LSR+TSNPG  HW+ + RV
Sbjct: 1039 TLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRV 1098

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            L+YL+ TR+YGLHY    + L+ +SDAN
Sbjct: 1099 LKYLRFTRDYGLHYTRYPAVLEGYSDAN 1126



 Score = 88.2 bits (217), Expect(2) = 9e-39
 Identities = 44/89 (49%), Positives = 59/89 (66%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ K T    V+V LYVDD+LI GSD K +  TK  L   FD+KD+G  DVILG+K+ +
Sbjct: 945  CVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKR 1004

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCKDNT 268
                 IL+QSHY++K+L KF+    KDN+
Sbjct: 1005 TSBELILSQSHYVDKILGKFD----KDNS 1029


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score = 97.4 bits (241), Expect(2) = 1e-38
 Identities = 44/86 (51%), Positives = 63/86 (73%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++I  +NE K FL ++FD+KDLG  DVIL +K++K
Sbjct: 933  CVYYRCGGGEGVILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKLIK 992

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
              G   L+QSHY+EKVLK+F + +CK
Sbjct: 993  ADGGITLSQSHYVEKVLKRFGFSECK 1018



 Score = 88.6 bits (218), Expect(2) = 1e-38
 Identities = 40/88 (45%), Positives = 61/88 (69%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            SV L  N+   ++Q  Y++I+ S+MY+   TRPD++ ++  LSRF SNPG DHW  L+RV
Sbjct: 1027 SVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDISFAVSKLSRFMSNPGTDHWHALERV 1086

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYL+ T +YG+HY    + L+ +SD+N
Sbjct: 1087 MRYLQGTMSYGIHYSGQHAVLEGYSDSN 1114


>gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1109

 Score = 93.6 bits (231), Expect(2) = 1e-38
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 872  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 931

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 932  MRYLKGTMELGLHYSRYPAVLEGYSDSN 959



 Score = 92.4 bits (228), Expect(2) = 1e-38
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FDIKDLG VDVIL +K+++
Sbjct: 778  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQHFDIKDLGVVDVILNIKLIR 837

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 838  GENEITLLQSHYVEKILNRFGYIDSK 863


>ref|XP_006605017.1| PREDICTED: uncharacterized protein LOC102660537 [Glycine max]
          Length = 1533

 Score = 94.0 bits (232), Expect(2) = 3e-38
 Identities = 44/86 (51%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   CVFTKVTLEYK-VVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVL 178
           C+++K     K V++ LYVDD+LIFG+D   V+ETK FL   FD+KD+G  DVILG+K+ 
Sbjct: 139 CLYSKFDTHGKGVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIK 198

Query: 179 KRGGTYILTQSHYIEKVLKKFNYFDC 256
           +      ++QSHYIEK+L+KFN+ DC
Sbjct: 199 RGNNGISISQSHYIEKILEKFNFKDC 224



 Score = 90.5 bits (223), Expect(2) = 3e-38
 Identities = 41/88 (46%), Positives = 62/88 (70%)
 Frame = +3

Query: 285 SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
           ++KL+PN+G  ++Q EY++ I S+MY +  TRPD+A ++  LSRFTSNP   HW+ + RV
Sbjct: 234 NLKLLPNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRV 293

Query: 465 LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +YLK T +YGL Y    S ++ +SDA+
Sbjct: 294 FKYLKGTIDYGLTYTGFPSVIEGYSDAS 321


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score = 94.7 bits (234), Expect(2) = 3e-38
 Identities = 43/100 (43%), Positives = 67/100 (67%)
 Frame = +3

Query: 249  LTARIIQVLSIQSVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSN 428
            L   ++++    S     N GE+ +Q EYA+++ S+MY++N TRPD++C+I  LSRFTSN
Sbjct: 1012 LNFNVVKIPIDLSCTFQKNVGESDSQLEYARVLGSLMYIMNCTRPDISCAISKLSRFTSN 1071

Query: 429  PGEDHWKELKRVLRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            P + HW  +K VL YLK +++Y LHY    + ++ +SDAN
Sbjct: 1072 PNQTHWMAMKHVLGYLKHSQHYALHYNKYPAMIEGYSDAN 1111



 Score = 89.7 bits (221), Expect(2) = 3e-38
 Identities = 43/84 (51%), Positives = 56/84 (66%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ K  L ++V+V LYVDD+LI   DI  +N TK  L   F +KDLG  DVILG+++LK
Sbjct: 930  CVYIKNVLNHEVIVFLYVDDMLIMSKDIDDINATKRMLSSKFAMKDLGVADVILGIRILK 989

Query: 182  RGGTYILTQSHYIEKVLKKFNYFD 253
                  L+QSHYIEK+L KF Y +
Sbjct: 990  TPQGLALSQSHYIEKILDKFKYLN 1013


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score = 93.2 bits (230), Expect(2) = 7e-38
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 90.1 bits (222), Expect(2) = 7e-38
 Identities = 42/86 (48%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++I+ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score = 93.2 bits (230), Expect(2) = 7e-38
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 90.1 bits (222), Expect(2) = 7e-38
 Identities = 42/86 (48%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++I+ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 93.2 bits (230), Expect(2) = 7e-38
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 90.1 bits (222), Expect(2) = 7e-38
 Identities = 42/86 (48%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++I+ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 622

 Score = 92.4 bits (228), Expect(2) = 7e-38
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285 SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
           S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 360 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 419

Query: 465 LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
           +RYLK T   GLHY    + L+ +SD+N
Sbjct: 420 MRYLKGTVELGLHYTGYPAVLEGYSDSN 447



 Score = 90.9 bits (224), Expect(2) = 7e-38
 Identities = 41/86 (47%), Positives = 60/86 (69%)
 Frame = +2

Query: 2   CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
           CV+ +   +  V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 266 CVYYRHGGDEGVILCLYVDDILIFGTNLEVINEAKSFLSQNFDMKDLGVADVILNIKLIR 325

Query: 182 RGGTYILTQSHYIEKVLKKFNYFDCK 259
                 L QSHY+EK+L +F Y D K
Sbjct: 326 GENGITLLQSHYVEKILNRFGYIDSK 351


>gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550001|gb|ABA92798.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1234

 Score = 92.0 bits (227), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 62/88 (70%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 973  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1032

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY      L+ +SD+N
Sbjct: 1033 MRYLKGTMELGLHYSGYPVILEGYSDSN 1060



 Score = 90.9 bits (224), Expect(2) = 1e-37
 Identities = 42/86 (48%), Positives = 60/86 (69%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 879  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLFQNFDMKDLGVADVILNIKLIR 938

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F YFD K
Sbjct: 939  GENEITLLQSHYVEKILNRFGYFDSK 964


>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1468

 Score = 92.4 bits (228), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1152 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1211

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1212 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1239



 Score = 90.1 bits (222), Expect(2) = 1e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 1058 CVYYRYGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1117

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1118 GENGITLLQSHYVEKILNRFGYIDSK 1143


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score = 93.2 bits (230), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 89.4 bits (220), Expect(2) = 1e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score = 93.2 bits (230), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTMELGLHYTGYPAVLEGYSDSN 1152



 Score = 89.4 bits (220), Expect(2) = 1e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score = 93.2 bits (230), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 89.4 bits (220), Expect(2) = 1e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score = 92.4 bits (228), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 90.1 bits (222), Expect(2) = 1e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRYGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 93.2 bits (230), Expect(2) = 1e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1152



 Score = 89.4 bits (220), Expect(2) = 1e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 971  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1030

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1031 GENGITLLQSHYVEKILNRFGYIDSK 1056


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score = 92.4 bits (228), Expect(2) = 2e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 998  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1057

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1058 MRYLKGTVELGLHYTGYPAVLEGYSDSN 1085



 Score = 89.7 bits (221), Expect(2) = 2e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 904  CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 963

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 964  GENEITLLQSHYVEKILNRFGYIDSK 989


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2027

 Score = 92.4 bits (228), Expect(2) = 2e-37
 Identities = 44/88 (50%), Positives = 63/88 (71%)
 Frame = +3

Query: 285  SVKLVPNEGETINQEEYAKIIDSIMYVVNHTRPDLACSIGILSRFTSNPGEDHWKELKRV 464
            S+ L  N+    NQ EY++II S+MY+ + TRPD++ ++  LSRFTSNPG+DHW+ L+RV
Sbjct: 1260 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1319

Query: 465  LRYLKSTRNYGLHYKCNASTLKCFSDAN 548
            +RYLK T   GLHY    + L+ +SD+N
Sbjct: 1320 MRYLKDTVELGLHYTGYPAVLEGYSDSN 1347



 Score = 89.4 bits (220), Expect(2) = 2e-37
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 2    CVFTKVTLEYKVVVTLYVDDLLIFGSDIKCVNETKEFLKQAFDIKDLGPVDVILGVKVLK 181
            CV+ +      V++ LYVDD+LIFG++++ +NE K FL Q FD+KDLG  DVIL +K+++
Sbjct: 1166 CVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIR 1225

Query: 182  RGGTYILTQSHYIEKVLKKFNYFDCK 259
                  L QSHY+EK+L +F Y D K
Sbjct: 1226 GENGITLLQSHYVEKILNRFGYIDSK 1251