BLASTX nr result

ID: Atropa21_contig00043027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00043027
         (573 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    59   5e-17
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          55   8e-09
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    58   2e-06

>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 58.5 bits (140), Expect(2) = 5e-17
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = +1

Query: 214 DKETLVAVAWVSFPDLPPNFFTKEVVFSLAVTMGRPL 324
           ++ET  A+AW+SFP LPPNFF KE +FS+A  +GRPL
Sbjct: 124 EEETTTAIAWISFPSLPPNFFGKETIFSMAAAVGRPL 160



 Score = 55.1 bits (131), Expect(2) = 5e-17
 Identities = 24/51 (47%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   PNVRELQIVISIQYEIKGPCTIGLIGNRYILIRLNLPEDYIKMMSTPTYYL 154
           P++ +L+ +I  Q E+KG   IGL+ NRY+LIR +L EDY+K++S P +Y+
Sbjct: 53  PDILDLRKLIPKQCELKGEVDIGLLCNRYVLIRASLLEDYVKLLSKPQFYI 103


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 55.5 bits (132), Expect(2) = 8e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +2

Query: 2   PNVRELQIVISIQYEIKGPCTIGLIGNRYILIRLNLPEDYIKMMSTPTYYLKVHDMY 172
           P++ EL+  I IQ EIKGPC IG +  R+ILIRL+L EDY  +MS   + L+V + Y
Sbjct: 37  PDLYELRKAIPIQLEIKGPCNIGFLEERHILIRLSLLEDYATLMS-KAWELRVRNRY 92



 Score = 30.4 bits (67), Expect(2) = 8e-09
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +1

Query: 214 DKETLVAVAWVSFPDLP 264
           ++ET +A+AW+SFP LP
Sbjct: 107 EEETTIAIAWISFPGLP 123


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +1

Query: 214 DKETLVAVAWVSFPDLPPNFFTKEVVFSLAVTMGRPL 324
           +++T  A+AW+SFP LPPNFF +EVVFSLAV +G+PL
Sbjct: 5   EEKTTTAIAWISFPALPPNFFGREVVFSLAVAVGKPL 41


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