BLASTX nr result

ID: Atropa21_contig00042892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042892
         (497 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344520.1| PREDICTED: uncharacterized protein LOC102602...    56   6e-06
ref|XP_002452729.1| hypothetical protein SORBIDRAFT_04g031435 [S...    55   7e-06
ref|XP_002449785.1| hypothetical protein SORBIDRAFT_05g023233 [S...    55   1e-05

>ref|XP_006344520.1| PREDICTED: uncharacterized protein LOC102602464 [Solanum tuberosum]
          Length = 1041

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = +2

Query: 101 TKDRMVEIGIQCDSAEYVLCDQEEVEDAQHLFVDCVWLNRYGWN*WHDW-GMQLPLLEPG 277
           + +R +++ IQ +  +  LCD++ +E   HLFV C W     W     W G++L      
Sbjct: 495 SSERKLKLHIQVEDTDCCLCDKKVMETTMHLFVKCDWAQAI-WKEVKQWIGIELQNNGIK 553

Query: 278 LMLSYIKHRQWCKMKKETVTIVYGALVYFT*QIKN*KNYRKK 403
             L  I    W K KKET+    GA++Y T ++++ K ++ K
Sbjct: 554 QTLKRIMLTHWKKFKKETIAATCGAILYHTWRVRSWKKFKGK 595


>ref|XP_002452729.1| hypothetical protein SORBIDRAFT_04g031435 [Sorghum bicolor]
           gi|241932560|gb|EES05705.1| hypothetical protein
           SORBIDRAFT_04g031435 [Sorghum bicolor]
          Length = 173

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   HGITIKTHAL-IWSKVVLPKHKFILWLAYQSKL*TKDRMVEIGIQCDSAEYVLCDQEEVE 178
           HG+T+   A  +W   V PK KF  WLA   ++ T DR    G+Q D A   LCDQE+ E
Sbjct: 52  HGLTLLPGARQLWRASVPPKVKFFAWLALHGRIWTSDRRRRHGLQ-DDASCALCDQED-E 109

Query: 179 DAQHLFVDCVW 211
            A HL + C W
Sbjct: 110 TADHLLLGCAW 120


>ref|XP_002449785.1| hypothetical protein SORBIDRAFT_05g023233 [Sorghum bicolor]
           gi|241935628|gb|EES08773.1| hypothetical protein
           SORBIDRAFT_05g023233 [Sorghum bicolor]
          Length = 528

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/94 (40%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = +2

Query: 2   HGITIKTHAL-IWSKVVLPKHKFILWLAYQSKL*TKDRMVEIGIQCDSAEYVLCDQEEVE 178
           HG+T+   A  +W   V PK KF  WLA + +L T DR    G+Q D A   LCDQE+ E
Sbjct: 357 HGLTLLPGARQLWRASVPPKVKFFAWLALRGRLWTSDRRHRHGLQGD-ASCALCDQED-E 414

Query: 179 DAQHLFVDCVWLNRYGWN*WHDW--GMQLPLLEP 274
            A HL + CV+        WH      +LPL  P
Sbjct: 415 TADHLLLGCVFTREV----WHRLLSSFRLPLRPP 444


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