BLASTX nr result
ID: Atropa21_contig00042866
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00042866 (506 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-li... 66 5e-09 ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-li... 66 5e-09 ref|XP_004288001.1| PREDICTED: small RNA degrading nuclease 3-li... 55 7e-06 >ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum tuberosum] Length = 497 Score = 65.9 bits (159), Expect = 5e-09 Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 4/55 (7%) Frame = +3 Query: 288 DYKINPRGQDWFVTERSEKSTFIQSKAMVSVDCEMV---DGTE-LVRICVVDCNL 440 DY +DW VT+RS+KS FIQSK MV++DCEMV DGTE LVRIC VD NL Sbjct: 116 DYSFPSHEEDWLVTKRSKKSNFIQSKDMVAIDCEMVLCQDGTEALVRICAVDRNL 170 >ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum lycopersicum] Length = 497 Score = 65.9 bits (159), Expect = 5e-09 Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 4/55 (7%) Frame = +3 Query: 288 DYKINPRGQDWFVTERSEKSTFIQSKAMVSVDCEMV---DGTE-LVRICVVDCNL 440 DY +DW VT+RS+KS FIQSK MV++DCEMV DGTE LVRIC VD NL Sbjct: 116 DYSFPSHEEDWLVTKRSKKSNFIQSKDMVAIDCEMVLCQDGTEALVRICAVDRNL 170 >ref|XP_004288001.1| PREDICTED: small RNA degrading nuclease 3-like [Fragaria vesca subsp. vesca] Length = 524 Score = 55.5 bits (132), Expect = 7e-06 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 4/60 (6%) Frame = +3 Query: 288 DYKINPRGQDWFVTERSEKSTFIQSKAMVSVDCEMV---DGTE-LVRICVVDCNLWYLLD 455 DY QDW VT+ +KS + S M++VDCEMV DGTE LVR+CVVD NL LD Sbjct: 117 DYAFPSHNQDWVVTKLKKKSKEMISNVMLAVDCEMVLCEDGTEALVRVCVVDRNLEVKLD 176