BLASTX nr result

ID: Atropa21_contig00042866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042866
         (506 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-li...    66   5e-09
ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-li...    66   5e-09
ref|XP_004288001.1| PREDICTED: small RNA degrading nuclease 3-li...    55   7e-06

>ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum tuberosum]
          Length = 497

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = +3

Query: 288 DYKINPRGQDWFVTERSEKSTFIQSKAMVSVDCEMV---DGTE-LVRICVVDCNL 440
           DY      +DW VT+RS+KS FIQSK MV++DCEMV   DGTE LVRIC VD NL
Sbjct: 116 DYSFPSHEEDWLVTKRSKKSNFIQSKDMVAIDCEMVLCQDGTEALVRICAVDRNL 170


>ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum
           lycopersicum]
          Length = 497

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = +3

Query: 288 DYKINPRGQDWFVTERSEKSTFIQSKAMVSVDCEMV---DGTE-LVRICVVDCNL 440
           DY      +DW VT+RS+KS FIQSK MV++DCEMV   DGTE LVRIC VD NL
Sbjct: 116 DYSFPSHEEDWLVTKRSKKSNFIQSKDMVAIDCEMVLCQDGTEALVRICAVDRNL 170


>ref|XP_004288001.1| PREDICTED: small RNA degrading nuclease 3-like [Fragaria vesca
           subsp. vesca]
          Length = 524

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
 Frame = +3

Query: 288 DYKINPRGQDWFVTERSEKSTFIQSKAMVSVDCEMV---DGTE-LVRICVVDCNLWYLLD 455
           DY      QDW VT+  +KS  + S  M++VDCEMV   DGTE LVR+CVVD NL   LD
Sbjct: 117 DYAFPSHNQDWVVTKLKKKSKEMISNVMLAVDCEMVLCEDGTEALVRVCVVDRNLEVKLD 176


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