BLASTX nr result

ID: Atropa21_contig00042848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042848
         (587 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   122   9e-26
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   120   3e-25
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   119   4e-25
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   118   1e-24
ref|XP_002331075.1| predicted protein [Populus trichocarpa]           113   3e-23
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   110   4e-22
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   105   1e-21
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   107   2e-21
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...   107   2e-21
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   105   7e-21
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   105   9e-21
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   105   9e-21
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...   104   2e-20
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   104   2e-20
ref|XP_006574188.1| PREDICTED: putative ribonuclease H protein A...   102   6e-20
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...   102   6e-20
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...   102   7e-20
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   102   7e-20
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   102   1e-19
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               102   1e-19

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  122 bits (305), Expect = 9e-26
 Identities = 55/141 (39%), Positives = 88/141 (62%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L VP+ S+++N +    L+EK+ AR+ +  ++ LSY GR QL+  VL  V +  + +FI+
Sbjct: 565 LGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFII 624

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P K++K I  LCR++LW G     + +L+ WD VC PK  G LG+ +  +WN  AV K  
Sbjct: 625 PAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLC 684

Query: 225 WNIAQKAYNLWVRWVNHVYLK 163
           W++A K   LW++W++  Y+K
Sbjct: 685 WDLANKEDKLWIKWIHAYYIK 705


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  120 bits (300), Expect = 3e-25
 Identities = 54/148 (36%), Positives = 93/148 (62%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L VP+ S++++ ++   L++K+  ++K   +R LSY GR+QL+N V+  + +Y  + F  
Sbjct: 143 LGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPF 202

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           PK V++KI A+CR FLW G     R S V W  +C P+  G L + D  +WN+  + K +
Sbjct: 203 PKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLL 262

Query: 225 WNIAQKAYNLWVRWVNHVYLKKSKLVAV 142
           WN++ K  +LWV+W+   Y+K+S+L+ +
Sbjct: 263 WNLSSKEDSLWVKWIQAYYVKRSELMHI 290


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  119 bits (299), Expect = 4e-25
 Identities = 55/147 (37%), Positives = 92/147 (62%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L VP+  +++N  +   L+EK+  +++   S+ LS  GR+QL+  ++  +  Y  S+F +
Sbjct: 246 LGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPM 305

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           PKKV++KI ++CR+F+W G    KR SLV W  VC+P R G L + +  +WN  A+ K +
Sbjct: 306 PKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCL 365

Query: 225 WNIAQKAYNLWVRWVNHVYLKKSKLVA 145
           WNI  K  NLWV+W++  +LK   +++
Sbjct: 366 WNICSKEDNLWVKWIHAYFLKGDNVMS 392


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  118 bits (296), Expect = 1e-24
 Identities = 61/173 (35%), Positives = 93/173 (53%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L VP+ S+++N   C+ L++K+  R +   +  LSY GR+QL+  +L  + +Y   IF L
Sbjct: 760  LGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPL 819

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            PKK++K +   CR FLW G   +   + V WD + +PK  G L V + ++WN+ A+ K +
Sbjct: 820  PKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLL 879

Query: 225  WNIAQKAYNLWVRWVNHVYLKKSKLVAVFPSKXXXXXXXXXLH*REIQARLCG 67
            W I  K   LWVRWVN  Y+K+  +  V  S             RE+  R  G
Sbjct: 880  WAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTRTGG 932


>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
          Length = 517

 Score =  113 bits (283), Expect = 3e-23
 Identities = 53/142 (37%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L VP+LS R+ A+ C+ L++++ ++V+    R LSY GRVQLIN VL  +  Y +S+F+L
Sbjct: 59  LGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLL 118

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P +V+K +  + ++FLW G ++    + V WD VC PK+ G LG++    WN+ A+ K++
Sbjct: 119 PGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHI 178

Query: 225 WNIAQKA-YNLWVRWVNHVYLK 163
           WN+   +  ++W  W+    L+
Sbjct: 179 WNLCNDSDGSIWSTWIRSNLLR 200


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  110 bits (274), Expect = 4e-22
 Identities = 49/141 (34%), Positives = 86/141 (60%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L +P+ S+++N  + ++L++K+  R+    +  LSY GRVQLI  V+    ++      L
Sbjct: 585  LGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPL 644

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            PK V+ +I A+CR+FLW G     R S + W+ VC PK  G L + +  +WN+ ++ K +
Sbjct: 645  PKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLL 704

Query: 225  WNIAQKAYNLWVRWVNHVYLK 163
            WN+  K+ NLW++W++  Y++
Sbjct: 705  WNVCNKSDNLWIKWLHTYYIR 725


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  105 bits (261), Expect(2) = 1e-21
 Identities = 52/142 (36%), Positives = 82/142 (57%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L +P+++ ++   +C  LL+++  R+K+  ++ LS+ GR+QLI  VL  +  Y +S  IL
Sbjct: 594  LGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLIL 653

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            PKKV+K I    R FLW G    +  + V W  +C PK  G LG++D   WN+  +  ++
Sbjct: 654  PKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHI 713

Query: 225  WNIAQKAYNLWVRWVNHVYLKK 160
            WN+   + N W  WV  VYL K
Sbjct: 714  WNLVSSSSNFWTDWVK-VYLLK 734



 Score = 23.9 bits (50), Expect(2) = 1e-21
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 176 MYT*KNQNWWQYSLPNDCCW**RKI 102
           +Y  K  ++W   LP+ C W  RK+
Sbjct: 730 VYLLKGNSFWNAPLPSICSWNWRKL 754


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  107 bits (268), Expect = 2e-21
 Identities = 50/146 (34%), Positives = 85/146 (58%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L VP+ S+++N      L++K+  R++   S+ L+ TGRVQ++N  +  +  +      +
Sbjct: 585  LGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPI 644

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            P  V+KKI ++CR+F+W       R S + W+ VCRPK  G L + +  VWN   V   +
Sbjct: 645  PMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCL 704

Query: 225  WNIAQKAYNLWVRWVNHVYLKKSKLV 148
            WN+ +K  NLWV+W++  Y+K S ++
Sbjct: 705  WNLCKKVDNLWVKWIHAHYIKNSSVM 730


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/143 (36%), Positives = 84/143 (58%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L VP+LS R+N  +   LL K+   ++    ++LSY G+++LI  V+  + ++   IF L
Sbjct: 95  LGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIFPL 154

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            + V+ +I A C NFLW   ++ K  SL+ W +VC PK+ G LG+ +   WN   +++ +
Sbjct: 155 SQSVLDRINASCCNFLWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRIL 214

Query: 225 WNIAQKAYNLWVRWVNHVYLKKS 157
           W+   K   LWVRWV+H Y + S
Sbjct: 215 WDFHCKKDFLWVRWVHHYYFRAS 237


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  105 bits (263), Expect = 7e-21
 Identities = 49/143 (34%), Positives = 87/143 (60%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L +P++++R++  +C  LLE++  R+ +  SR LSY GR+ LI+ VL  + ++  + F L
Sbjct: 772  LGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRL 831

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            P+K ++++  +C  FLW G E++   + + W +VC+PK  G LG+R     N+    K V
Sbjct: 832  PRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLV 891

Query: 225  WNIAQKAYNLWVRWVNHVYLKKS 157
            W I   + +LWV+WV+   L+ +
Sbjct: 892  WKIVSHSNSLWVKWVDQHLLRNA 914


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score =  105 bits (262), Expect = 9e-21
 Identities = 49/145 (33%), Positives = 86/145 (59%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L VP++S+++   + + L++++ +R  +  +R+LS+ GR+QL+  V+    ++ +SIFIL
Sbjct: 313 LGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFIL 372

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P + + K+  +C  FLW G   S R + + WD+VC  K  G LG++    WN+    K +
Sbjct: 373 PNQCLHKLEQMCNAFLWSGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLI 432

Query: 225 WNIAQKAYNLWVRWVNHVYLKKSKL 151
           W +   + +LWV WV  V+ K  KL
Sbjct: 433 WLLFTASGSLWVSWVRWVWRKLCKL 457


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  105 bits (262), Expect = 9e-21
 Identities = 50/141 (35%), Positives = 86/141 (60%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L +P+L  R+ + +C+ L++++ +R+++  +R LS+ GR+QL+  VL  +  Y +S+F+L
Sbjct: 39  LGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFML 98

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P KV + +  + R++LW G+E  +  + V WD VC P   G L +RD   WN  +  K +
Sbjct: 99  PMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKIL 158

Query: 225 WNIAQKAYNLWVRWVNHVYLK 163
           W +  K+ +LWV WV    LK
Sbjct: 159 WLLLVKSGSLWVAWVEAYILK 179


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score =  104 bits (259), Expect = 2e-20
 Identities = 51/145 (35%), Positives = 86/145 (59%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L +P+LSRR+ + +C+ L++ + +R+++  +R LS+   +QL+  VL  +  Y +S+F+L
Sbjct: 224 LGLPLLSRRLRSSDCDPLIQCITSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFML 283

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P KV K +  + R++LW G+E  +  + V WD VC P   G L + D   WN+ +  K +
Sbjct: 284 PMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKIL 343

Query: 225 WNIAQKAYNLWVRWVNHVYLKKSKL 151
           W +  K+ +LWV WV    LK   L
Sbjct: 344 WLLLVKSGSLWVAWVEAYILKGRSL 368


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  104 bits (259), Expect = 2e-20
 Identities = 52/148 (35%), Positives = 84/148 (56%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L VP+ S+++    C+ L+E +  R +   ++ LSY GR+QLI  +L  + +Y + IF L
Sbjct: 757  LGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPL 816

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
             KKV++ +  +CR FLW G+    + + V W  + RPK  G   V +   WN  A+ K +
Sbjct: 817  SKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLL 876

Query: 225  WNIAQKAYNLWVRWVNHVYLKKSKLVAV 142
            W I  K   LWVRW++  Y+K+  ++ V
Sbjct: 877  WAIEFKRDKLWVRWIHSYYIKRQDILTV 904


>ref|XP_006574188.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 254

 Score =  102 bits (255), Expect = 6e-20
 Identities = 51/139 (36%), Positives = 83/139 (59%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L +PI  +  +++  E L++K  A++     +N+S  G++ LIN VL  +  Y  S F +
Sbjct: 43  LGIPIGVKSSSSIVWEPLIKKCEAKLSKWARKNISMGGKITLINSVLNALPIYLLSFFKI 102

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P+KV+ +++ L RNFLW G + +K+   V WD+VC PK  GDLG++D   +N   + K++
Sbjct: 103 PQKVINRLVKLERNFLWGGDQDNKKIPWVKWDIVCLPKCEGDLGIKDIAKFNTALLGKWI 162

Query: 225 WNIAQKAYNLWVRWVNHVY 169
           W +A     LWVR +N  Y
Sbjct: 163 WALASDHQQLWVRIINSKY 181


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 977

 Score =  102 bits (255), Expect = 6e-20
 Identities = 51/141 (36%), Positives = 83/141 (58%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L +P+L++R+ A +   LLE++  ++ +   R LS  GR+ LI+ VL  + ++    F L
Sbjct: 729  LGLPLLTKRLTATDYAPLLEQLKRKIGSWTHRYLSNAGRLNLISSVLWSICNFWLFAFRL 788

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            P++ ++ I  LC +FLW GQ+++ R + V WD VC+PK+ G LG+R     N+    K V
Sbjct: 789  PRECIRDIDKLCSSFLWSGQDLNPRKAKVSWDDVCKPKKEGGLGLRSLKEANDVCCLKVV 848

Query: 225  WNIAQKAYNLWVRWVNHVYLK 163
            W I     +LWV+W+    LK
Sbjct: 849  WKIVSHGNSLWVKWIEKFLLK 869


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score =  102 bits (254), Expect = 7e-20
 Identities = 51/143 (35%), Positives = 83/143 (58%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L  P+LS R+N  +   LL K+   ++    ++LSY G+++LI  V+  + ++   IF L
Sbjct: 128 LGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNFWMRIFPL 187

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P+ V+ +I A C NFLW   ++ K   LV W +VC PK+ G LG+ +   WN   ++  +
Sbjct: 188 PQSVLDRINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNLALLSHIL 247

Query: 225 WNIAQKAYNLWVRWVNHVYLKKS 157
           W+   K  +L VRWV+H Y ++S
Sbjct: 248 WDFHCKKDSLRVRWVHHYYFRRS 270


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  102 bits (254), Expect = 7e-20
 Identities = 49/143 (34%), Positives = 85/143 (59%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L +P++++R  + +   LLE++  R+    +R LSY GR+ L++ VL  + ++  S F L
Sbjct: 290 LCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRL 349

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P++ +++I  LC  FLW G E+S   + + W+ VCRPKR G LG++     N+    K +
Sbjct: 350 PRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLI 409

Query: 225 WNIAQKAYNLWVRWVNHVYLKKS 157
           W I  +  +LWV+W+    LK++
Sbjct: 410 WRIVSQGDSLWVQWIRTYLLKRN 432


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  102 bits (253), Expect = 1e-19
 Identities = 49/137 (35%), Positives = 80/137 (58%)
 Frame = -3

Query: 585  LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
            L +P++ R++   +   LLEK+ AR+++  S+ LS+ GR QLI+ V+  + ++  S F+L
Sbjct: 625  LGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLL 684

Query: 405  PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
            PK  +KKI +LC  FLW G    +++S V W   C PK  G LG R    WN+  + + +
Sbjct: 685  PKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLI 744

Query: 225  WNIAQKAYNLWVRWVNH 175
            W +  +  +LW +W  H
Sbjct: 745  WVLFDRDTSLWAQWQRH 761


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  102 bits (253), Expect = 1e-19
 Identities = 47/145 (32%), Positives = 84/145 (57%)
 Frame = -3

Query: 585 LRVPILSRRINAVNCEMLLEKMGARVKARGSRNLSYTGRVQLINFVLLHVFSY*SSIFIL 406
           L +P++++R+ + +   LLE++  R+     R  S+ GR  LI  VL  + ++  + F L
Sbjct: 419 LGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRL 478

Query: 405 PKKVMKKIIALCRNFLWDGQEVSKRTSLVDWDLVCRPKRMGDLGVRDNIVWNEEAVAKYV 226
           P++ +++I  LC +FLW G E+S   + + WD+VC+PK  G LG+R+    N+ +  K V
Sbjct: 479 PRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLV 538

Query: 225 WNIAQKAYNLWVRWVNHVYLKKSKL 151
           W I   + +LW +WV    ++K  +
Sbjct: 539 WRIISNSNSLWTKWVAEYLIRKKSI 563


Top