BLASTX nr result
ID: Atropa21_contig00042807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042807
(669 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 54 4e-12
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 54 3e-11
ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264... 50 3e-11
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 54 5e-11
ref|XP_004250539.1| PREDICTED: putative ribonuclease H protein A... 44 5e-11
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 61 6e-11
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 51 1e-10
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 48 1e-10
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A... 47 2e-10
ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein A... 49 4e-10
ref|XP_004234299.1| PREDICTED: putative ribonuclease H protein A... 46 4e-10
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 45 5e-10
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 55 6e-10
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 47 6e-10
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A... 44 9e-10
ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein A... 53 1e-09
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 52 3e-09
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 46 5e-09
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 45 2e-08
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 44 2e-08
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 54.3 bits (129), Expect(3) = 4e-12
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +1
Query: 13 DLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVH 192
++++ + + IV W+ P G KLN DG + N GGGG++R+ QG+++ F++
Sbjct: 1261 NIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLP 1320
Query: 193 FGLETNN 213
FG TNN
Sbjct: 1321 FGFGTNN 1327
Score = 32.7 bits (73), Expect(3) = 4e-12
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEAL 350
G++ C G K IE+E DS+LL WI + P + I+ +
Sbjct: 1337 GLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQI 1379
Score = 30.0 bits (66), Expect(3) = 4e-12
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 356 VLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRV 523
++ +DQF H YRE + A++ + + + + F QL + RG ++L+++
Sbjct: 1382 IIRKMDQFQCHHIYREANCTADLLSKWSHNLEILQKFYTTRQLKEPIRGSYLLEKM 1437
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 53.9 bits (128), Expect(3) = 3e-11
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +1
Query: 13 DLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVH 192
++++ + + +V W+ P G KLN DG + N GGGG++R+ QG+++ F++
Sbjct: 1068 NIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLP 1127
Query: 193 FGLETNN 213
FG TNN
Sbjct: 1128 FGFGTNN 1134
Score = 38.1 bits (87), Expect(3) = 3e-11
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+ C G K +E+E DSQLL WI NK P D I+ ++
Sbjct: 1144 GLEWCDQHGYKRVELEVDSQLLCNWIKNKTNIPWIYEDLIQQIK 1187
Score = 21.9 bits (45), Expect(3) = 3e-11
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 347 IKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQL 484
IK + ++QF H YRE + A++ + + + + F QL
Sbjct: 1186 IKQITRKIEQFQCHHIYREANITADLLSKWSHSLELVQHFYTKRQL 1231
>ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264807 [Solanum
lycopersicum]
Length = 934
Score = 50.1 bits (118), Expect(3) = 3e-11
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 46 LTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
+T+V W+ P G KLN DG + N +GGGG++R+ Q +++ F++ TNN
Sbjct: 752 VTLVRWNRPPSGIYKLNTDGSAIHNTGQTGGGGILRDDQDKLIYVFSIPLAFGTNN 807
Score = 35.8 bits (81), Expect(3) = 3e-11
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+N C G K I +E DS+LLV+WI N + P I+ L+
Sbjct: 817 GLNWCQQHGFKRIILEVDSELLVKWITNTQSIPWRSQPDIQQLQ 860
Score = 28.1 bits (61), Expect(3) = 3e-11
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 368 LDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRV 523
++ F QH YRE + A + A + ++ I F QL +G +IL+++
Sbjct: 866 MEYFQCQHIYREANATAELLAKWSHKMDIIQHFYTSQQLRGAIKGNYILEKM 917
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 13 DLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVH 192
+L + + + +T V W PS G KLN DG + N + GGGG++R+ G+++ F +
Sbjct: 817 NLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIP 876
Query: 193 FGLETNN 213
FG+ TNN
Sbjct: 877 FGIGTNN 883
Score = 32.0 bits (71), Expect(3) = 5e-11
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTI 341
G++ C G K I +E DS+LL +WI N P TI
Sbjct: 893 GLSWCEQHGYKRIILEVDSELLSKWIDNSINIPWRCQPTI 932
Score = 27.3 bits (59), Expect(3) = 5e-11
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +2
Query: 347 IKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRV 523
I+ +++ ++ F QH +RE + A++ A + Q + F QL RG ++L+++
Sbjct: 935 IQDIVNKMEYFQCQHIFREANGTADLLAKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKM 993
>ref|XP_004250539.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 44.3 bits (103), Expect(3) = 5e-11
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 52 IVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
+V W P D + K+N DG + NP G GG++R++ GR++ F TNN
Sbjct: 1 MVNWIRPQDQWLKVNTDGSAITNPGRLGAGGILRDKNGRLVMAFTTPLEEGTNN 54
Score = 35.0 bits (79), Expect(3) = 5e-11
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+ I G +NI +E DSQL+V WI+ K P N+ + L+
Sbjct: 64 GLTWAIELGYRNIILEIDSQLVVHWILKKSLPQWNIITQLGRLQ 107
Score = 33.9 bits (76), Expect(3) = 5e-11
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2
Query: 356 VLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRVQYPS 535
++S F H +RE + VA+ +NH+ +I + + Q+P+ A+ + LD +Q PS
Sbjct: 109 LISQTQNFKCLHVFREVNWVADALSNHSHRITSPQVYFNSQQMPKEAKSYYYLDLLQMPS 168
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 60.8 bits (146), Expect(2) = 6e-11
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = +1
Query: 1 KHIWDLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKT 180
+ +++L++ + + +T+V W P +G KLN DG +K N GGGG++R+ QG+++
Sbjct: 192 ERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYA 251
Query: 181 FNVHFGLETNN 213
F + G TNN
Sbjct: 252 FAIPLGFGTNN 262
Score = 32.7 bits (73), Expect(2) = 6e-11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP 320
G+ C G + I +E DS+LL +WI+NK + P
Sbjct: 272 GLQWCQQHGFEKIILEVDSELLHKWIINKSSVP 304
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 51.2 bits (121), Expect(3) = 1e-10
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +1
Query: 13 DLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVH 192
++I+ + +V W+ P+ G KLN DG + N GGGG +R+ QG+++ F++
Sbjct: 1140 NIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIP 1199
Query: 193 FGLETNN 213
FG+ TNN
Sbjct: 1200 FGVGTNN 1206
Score = 32.7 bits (73), Expect(3) = 1e-10
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+ C G K +E+E +S+LL WI N P D ++ ++
Sbjct: 1216 GMEWCEQHGYKKVELEVNSELLYNWIKNTTKIPWRYEDLVQQIQ 1259
Score = 28.1 bits (61), Expect(3) = 1e-10
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 368 LDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRV 523
++QF H YRE + A++ + + + F QL +G +IL+++
Sbjct: 1265 MEQFHCHHIYREANNTADLLSKWSNNCEIVQHFYTTRQLEGAIKGSYILEKM 1316
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 47.8 bits (112), Expect(3) = 1e-10
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 55 VYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
V W+ P + + K+N DG + NP G GG+IRN++G+++ F G +NN
Sbjct: 596 VVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSNN 648
Score = 32.3 bits (72), Expect(3) = 1e-10
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 219 IGVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
IG+ + G +NI +E DSQL+V+WI K ++ + IE L+
Sbjct: 657 IGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQ 701
Score = 32.0 bits (71), Expect(3) = 1e-10
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 347 IKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRVQ 526
++ ++ F QH +RE + VA+ + H+ I + D QLP+ A + +D +
Sbjct: 700 LQYLIMQTQNFKCQHIFREANWVADALSKHSHHITSPQLYFDSNQLPKEANAYYRMDLLN 759
Query: 527 YPS 535
PS
Sbjct: 760 MPS 762
>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 213
Score = 47.0 bits (110), Expect(2) = 2e-10
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +1
Query: 16 LIQTTRPTMTLTIVY---WSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFN 186
LIQT+ + VY W P D + K+N DG + N G GG+IR+++G+M+ F+
Sbjct: 18 LIQTSEKCVHNIEVYKVAWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFS 77
Query: 187 VHFGLETNN 213
G +NN
Sbjct: 78 TPLGEGSNN 86
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+ G KNI +E DSQL+V+WI NK PP NL + +E L+
Sbjct: 96 GLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQ 139
>ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 49.3 bits (116), Expect(2) = 4e-10
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +1
Query: 52 IVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
+V W P KLN DG + + GGGG++R+ QG+++ F+V FG+ TNN
Sbjct: 1 MVRWIKPKQYIYKLNTDGSALADNGKIGGGGVLRDHQGKLIYAFSVPFGIGTNN 54
Score = 41.6 bits (96), Expect(2) = 4e-10
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEAL 350
G+ C G KNIE+E DS+++ +WI N PP T++ L
Sbjct: 64 GIEWCEQHGYKNIELEVDSEMICQWINNIIKPPWRCQQTVQQL 106
>ref|XP_004234299.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 193
Score = 46.2 bits (108), Expect(3) = 4e-10
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 55 VYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
V W P + KLN + NP GGG++R+ QG M+ F + G+ TNN
Sbjct: 14 VTWEKPQQSFLKLNTGRSALNNPGKIEGGGIVRDFQGNMIYAFTIPLGISTNN 66
Score = 34.3 bits (77), Expect(3) = 4e-10
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NL 329
G+ CI G + I +E DS+L++ W+ N+ P NL
Sbjct: 76 GLYWCIQHGYRKIHLEVDSELVIHWLSNQTYYPWNL 111
Score = 29.6 bits (65), Expect(3) = 4e-10
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +2
Query: 305 QIYSTLKLI*YY*GIKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQL 484
Q Y L Y I ++ L++ + H YRE + A+ + ++ + F QL
Sbjct: 104 QTYYPWNLQPYILEIHRIVHHLERIKITHLYREANNTADRLSQYSHNTDIVQNFYIKDQL 163
Query: 485 PQGARGEFILDRV 523
P ARG FIL+++
Sbjct: 164 PTLARGSFILEKL 176
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 45.4 bits (106), Expect(2) = 5e-10
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 55 VYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
V W P D + K+N DG + N G GG+IR+++G+M+ F+ G +NN
Sbjct: 289 VTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNN 341
Score = 45.1 bits (105), Expect(2) = 5e-10
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+ G KNI +E DSQL+V+WI NK PP NL + +E L+
Sbjct: 351 GLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQ 394
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 55.5 bits (132), Expect(2) = 6e-10
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +1
Query: 13 DLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVH 192
++I+ + +V W+ P+ G KLN DG + N +GGGG++R+ QG+++ F++
Sbjct: 522 NIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIVYAFSIP 581
Query: 193 FGLETNN 213
FG+ TNN
Sbjct: 582 FGVGTNN 588
Score = 34.7 bits (78), Expect(2) = 6e-10
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G+ C G K +E+E DS+LL WI N P D ++ ++
Sbjct: 598 GMQWCEQHGYKKVELEVDSELLFNWIKNTTKIPWRYEDLVQQIQ 641
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 47.4 bits (111), Expect(3) = 6e-10
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 55 VYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
V W+ P + + K+N DG + NP G GG+IRN++G+++ F G T N
Sbjct: 596 VVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLVMAFATSLGEGTKN 648
Score = 32.3 bits (72), Expect(3) = 6e-10
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 219 IGVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
IG+ + G +NI +E DSQL+V+WI K ++ + IE L+
Sbjct: 657 IGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQ 701
Score = 29.6 bits (65), Expect(3) = 6e-10
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 347 IKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRVQ 526
++ ++ F QH ++E + VA+ + H I + D QLP+ A + +D +
Sbjct: 700 LQYLIMQTQNFKCQHIFKEANWVADALSKHNHHITSPQLYFDSNQLPKEANAYYRMDLLN 759
Query: 527 YPS 535
PS
Sbjct: 760 MPS 762
>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 43.9 bits (102), Expect(3) = 9e-10
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 52 IVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
+V W P D + K+N DG + N G GG+IR+++G+++ F+ G +NN
Sbjct: 1 MVTWFKPPDQWIKINTDGSAIINEGKIGAGGIIRDKEGKLLMAFSTPLGEGSNN 54
Score = 38.9 bits (89), Expect(3) = 9e-10
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEAL 350
G+ + G KNI +E DSQL+V+WI NK P + + +E L
Sbjct: 64 GMTWALELGFKNILLELDSQLVVQWISNKIAPQWSFTNQLERL 106
Score = 26.2 bits (56), Expect(3) = 9e-10
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 356 VLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRVQYPS 535
++ F H +RE + VA+ + H+ + + QLP+ A+ + +D + PS
Sbjct: 109 IIMQTQNFKCSHIFREANWVADALSKHSHNTTAPQVYFNSNQLPKEAQAYYQMDLLNMPS 168
>ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +1
Query: 52 IVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
+V W P DG K+N DG + GGGG++R+ QG ++ F++ FGL TNN
Sbjct: 1 MVSWRKPDDGIYKINTDGSALQESGNIGGGGIVRDHQGNLIYAFSLPFGLGTNN 54
Score = 36.2 bits (82), Expect(2) = 1e-09
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G++ C G K+IE+E DS+LL +WI N P T++ ++
Sbjct: 64 GLDWCEQHGYKSIELEVDSELLCKWINNTVGIPWRCQQTVQQIQ 107
>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 338
Score = 51.6 bits (122), Expect(2) = 3e-09
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +1
Query: 46 LTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
+++V W+ PS+ + K+N DG + NP +G GG++R+++G+M+ F G TNN
Sbjct: 156 VSMVTWNRPSEQWIKINTDGSALTNPGQTGAGGILRDKEGKMVMAFATPLGEGTNN 211
Score = 36.2 bits (82), Expect(2) = 3e-09
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR*F*VS*ISSLFNTAIE 401
G++ + G +NI+IE D+QL+V+WI K P ++ + IE ++ + + T I
Sbjct: 221 GLSWALELGHRNIQIELDAQLVVKWITRKEVPHWSVINQIERIQHL-IMQTQNFMCTHIF 279
Query: 402 RAARW 416
R A W
Sbjct: 280 REANW 284
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 46.2 bits (108), Expect(3) = 5e-09
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +1
Query: 13 DLIQTTRPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVH 192
++I+ +T V W+ P + KLN DG + NP G G +IRN G ++ ++
Sbjct: 1054 NVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTP 1113
Query: 193 FGLETNN 213
G TNN
Sbjct: 1114 LGTGTNN 1120
Score = 32.7 bits (73), Expect(3) = 5e-09
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEAL 350
G+ CI+ + +E DSQLLV+W N P N+ ++ L
Sbjct: 1130 GIAWCIHMKYNQVILEVDSQLLVDWFKNNKLIPWNISSQMQQL 1172
Score = 27.3 bits (59), Expect(3) = 5e-09
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 368 LDQFTVQHGYREGSEVANI*ANHATQIRG----ISWFDDPLQLPQGARGEFILDRV 523
LD F H +RE + VA++ + H+ QI + F ++ G+F+L R+
Sbjct: 1179 LDHFKCIHTFREANFVADVLSKHSHQIPNPQIMVRAFHKKVRAKMFEIGQFVLKRI 1234
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 45.4 bits (106), Expect(3) = 2e-08
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 55 VYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFNVHFGLETNN 213
V W+ P + + K+N DG + NP G GG++R+ +GR++ F G +NN
Sbjct: 137 VAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNN 189
Score = 32.7 bits (73), Expect(3) = 2e-08
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 216 QIGVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
Q G++ I+ +NI +E DSQ++V+WI K T ++ + +E ++
Sbjct: 197 QFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQ 242
Score = 26.2 bits (56), Expect(3) = 2e-08
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +2
Query: 347 IKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRVQ 526
I+ ++ +F +H +RE + A+ + H+ G + + Q+P+ A+ + +D +
Sbjct: 241 IQQLIQRAHKFKCEHIFREANWTADSLSKHSHGTTGPQLYFNNNQMPKEAQAYYRMDLMN 300
Query: 527 YPS 535
PS
Sbjct: 301 MPS 303
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 43.5 bits (101), Expect(3) = 2e-08
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 16 LIQTT---RPTMTLTIVYWSPPSDGYDKLNADGRSKGNPSLSGGGGLIRNQQGRMMKTFN 186
LIQT+ + + + +V W+ P + + K+N DG + N G GG++R+++G+M+ F
Sbjct: 113 LIQTSEKCKHEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFA 172
Query: 187 VHFGLETNN 213
G +NN
Sbjct: 173 TPLGEGSNN 181
Score = 35.0 bits (79), Expect(3) = 2e-08
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 222 GVN*CINQGLKNIEIETDSQLLVEWIMNKFTPP*NLYDTIEALR 353
G++ + G +NI IE DSQL+V+WI K P ++ IE ++
Sbjct: 191 GLSWALELGYRNILIELDSQLVVQWISKKTAPHWSVTKQIERIQ 234
Score = 25.8 bits (55), Expect(3) = 2e-08
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 347 IKIVLSLLDQFTVQHGYREGSEVANI*ANHATQIRGISWFDDPLQLPQGARGEFILDRVQ 526
I+ ++ F H +RE + VA+ + H+ + QLP+ A+ + +D +
Sbjct: 233 IQHLIMQTQNFKCTHIFREANWVADSLSKHSHNTTAPQVYFSSTQLPKEAQAYYQMDLLN 292
Query: 527 YPS 535
PS
Sbjct: 293 MPS 295