BLASTX nr result
ID: Atropa21_contig00042804
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042804
(597 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 82 2e-31
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 88 4e-30
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 86 1e-28
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 83 2e-28
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 83 2e-28
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 82 9e-28
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 82 1e-27
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 82 1e-27
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 81 1e-27
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 84 2e-27
ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660... 88 8e-27
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 83 2e-25
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 73 5e-25
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 81 1e-24
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 73 1e-24
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 80 5e-24
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 80 2e-23
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 76 3e-23
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 79 4e-23
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 70 5e-23
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 82.4 bits (202), Expect(2) = 2e-31
Identities = 43/96 (44%), Positives = 62/96 (64%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PKI + DY+PIAC TLYKIISK+L RL+ +++ +V Q+ F+ R I N+L+
Sbjct: 506 PKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILL 565
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFVK 4
+LI YNR S ++KVD+RKAY+ VE F++
Sbjct: 566 ATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLE 601
Score = 79.7 bits (195), Expect(2) = 2e-31
Identities = 42/109 (38%), Positives = 66/109 (60%)
Frame = -2
Query: 596 YTNLLGSCNNQRDAVCSRVIKQGSLVSAEQGKWIEEKVTRQEITQAL*GITCD*APGPDG 417
Y LLG+ ++Q +A+ V++ G+ +SA + + +T QEI QAL I APG DG
Sbjct: 404 YRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDG 463
Query: 416 YGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRAVIIVIPKSDHAE 270
+ S FFK +W +I ++ + +L+FF+NG M K N + +IPK D A+
Sbjct: 464 FNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAK 512
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 88.2 bits (217), Expect(2) = 4e-30
Identities = 40/86 (46%), Positives = 64/86 (74%)
Frame = -1
Query: 261 DYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNR 82
+++PIAC +YKIISK+L +R++ +L+++VSENQS FV GR I N+++ +L+ Y+R
Sbjct: 196 NFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSR 255
Query: 81 ESSSKSYLMKVDLRKAYNIVE*EFVK 4
+ S ++K+DL+KAYN VE F+K
Sbjct: 256 KGISPRCMVKIDLQKAYNSVEWPFIK 281
Score = 69.7 bits (169), Expect(2) = 4e-30
Identities = 38/104 (36%), Positives = 56/104 (53%)
Frame = -2
Query: 596 YTNLLGSCNNQRDAVCSRVIKQGSLVSAEQGKWIEEKVTRQEITQAL*GITCD*APGPDG 417
Y L+GS + V V+K+G ++S Q + K T E+ L + APG DG
Sbjct: 84 YLKLMGSSVDSLPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAPGIDG 143
Query: 416 YGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRAVIIVIPK 285
Y FFK +W+II V DA+L+FF+ G M K+ N + ++PK
Sbjct: 144 YNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPK 187
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 85.9 bits (211), Expect(2) = 1e-28
Identities = 43/96 (44%), Positives = 64/96 (66%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PK+ +++PIAC +YKIISK+L NR++ I+ +V+E QS F+ GR IA N+L+
Sbjct: 503 PKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILL 562
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFVK 4
+LI Y R+ S +MKVD+RKAY+ VE F++
Sbjct: 563 ASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLE 598
Score = 67.0 bits (162), Expect(2) = 1e-28
Identities = 37/108 (34%), Positives = 58/108 (53%)
Frame = -2
Query: 596 YTNLLGSCNNQRDAVCSRVIKQGSLVSAEQGKWIEEKVTRQEITQAL*GITCD*APGPDG 417
Y LLG+ + V ++ G +SA+ + + +V EI +AL GI D APG DG
Sbjct: 401 YKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDG 460
Query: 416 YGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRAVIIVIPKSDHA 273
+ + FFK +W I ++ + EFF N +M + N V+ ++PK HA
Sbjct: 461 FNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHA 508
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 83.2 bits (204), Expect(2) = 2e-28
Identities = 38/85 (44%), Positives = 66/85 (77%)
Frame = -1
Query: 261 DYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNR 82
+++PI+C +TLYK+ISK+L +RL+ +LS ++ +QS F+ GR++A+NVL+ +++ YNR
Sbjct: 382 EFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441
Query: 81 ESSSKSYLMKVDLRKAYNIVE*EFV 7
+ S ++KVDL+KA++ V+ EFV
Sbjct: 442 LNISPRGMLKVDLKKAFDSVKWEFV 466
Score = 68.6 bits (166), Expect(2) = 2e-28
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = -2
Query: 518 SAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQ 339
S +Q +E+ T EI A + + GPDGY +FF+D W II +V A+ EFF
Sbjct: 296 SQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFD 355
Query: 338 NGKMLKVWNRAVIIVIPKSDHA 273
+G++LK WN +++IPK+ +A
Sbjct: 356 SGQLLKQWNATTLVLIPKTSNA 377
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 83.2 bits (204), Expect(2) = 2e-28
Identities = 38/85 (44%), Positives = 66/85 (77%)
Frame = -1
Query: 261 DYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNR 82
+++PI+C +TLYK+ISK+L +RL+ +LS ++ +QS F+ GR++A+NVL+ +++ YNR
Sbjct: 382 EFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441
Query: 81 ESSSKSYLMKVDLRKAYNIVE*EFV 7
+ S ++KVDL+KA++ V+ EFV
Sbjct: 442 LNISPRGMLKVDLKKAFDSVKWEFV 466
Score = 68.6 bits (166), Expect(2) = 2e-28
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = -2
Query: 518 SAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQ 339
S +Q +E+ T EI A + + GPDGY +FF+D W II +V A+ EFF
Sbjct: 296 SQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFD 355
Query: 338 NGKMLKVWNRAVIIVIPKSDHA 273
+G++LK WN +++IPK+ +A
Sbjct: 356 SGQLLKQWNATTLVLIPKTSNA 377
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 82.0 bits (201), Expect(2) = 9e-28
Identities = 41/99 (41%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*D----TLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQ 124
PKI + D++PI+C D TLYK+I+++L NRL+ +LS ++S QS F+ GR +A+
Sbjct: 461 PKITNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAE 520
Query: 123 NVLICQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFV 7
NVL+ +L+ YNR++ ++KVDLRKA++ + +F+
Sbjct: 521 NVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFI 559
Score = 67.8 bits (164), Expect(2) = 9e-28
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = -2
Query: 518 SAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQ 339
S +Q K + +RQ+I A + GPDG+ +FFK+ W +I T+V DAV EFF
Sbjct: 385 SHDQKKELAMSFSRQDIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFT 444
Query: 338 NGKMLKVWNRAVIIVIPKSDHA 273
+ +LK WN +++IPK +A
Sbjct: 445 SSVLLKQWNATTLVLIPKITNA 466
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 82.4 bits (202), Expect(2) = 1e-27
Identities = 38/95 (40%), Positives = 69/95 (72%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PKI + D++PI+C +TLYK+I+K+L +RL+ +L+ ++S +QS F+ GR +++NVL+
Sbjct: 513 PKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLL 572
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFV 7
+++ YN ++ S ++KVDLRKA++ V +F+
Sbjct: 573 ATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFI 607
Score = 67.0 bits (162), Expect(2) = 1e-27
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = -2
Query: 518 SAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQ 339
S +Q +E + +I +A + + A GPDGY S+FFK W ++ +V +AV EFF+
Sbjct: 437 SVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFR 496
Query: 338 NGKMLKVWNRAVIIVIPK 285
+G++LK WN +++IPK
Sbjct: 497 SGQLLKQWNATTLVLIPK 514
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 82.4 bits (202), Expect(2) = 1e-27
Identities = 38/95 (40%), Positives = 69/95 (72%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PKI + D++PI+C +TLYK+I+K+L +RL+ +L+ ++S +QS F+ GR +++NVL+
Sbjct: 513 PKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLL 572
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFV 7
+++ YN ++ S ++KVDLRKA++ V +F+
Sbjct: 573 ATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFI 607
Score = 67.0 bits (162), Expect(2) = 1e-27
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = -2
Query: 518 SAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQ 339
S +Q +E + +I +A + + A GPDGY S+FFK W ++ +V +AV EFF+
Sbjct: 437 SVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFR 496
Query: 338 NGKMLKVWNRAVIIVIPK 285
+G++LK WN +++IPK
Sbjct: 497 SGQLLKQWNATTLVLIPK 514
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 81.3 bits (199), Expect(2) = 1e-27
Identities = 37/97 (38%), Positives = 63/97 (64%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PK+ + +Y PIAC LYKIISKV+ R+ ++ ++ E+Q+ F+ GR IA N+++
Sbjct: 304 PKVQCPKTVKEYTPIACCTVLYKIISKVITRRMHDVIHDVICESQAGFIPGRKIADNIIL 363
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFVKE 1
+L+ Y R++ S ++K+DL KAY+ VE F+++
Sbjct: 364 AHELVKTYTRKNISPRIILKIDLHKAYDSVEWPFLEQ 400
Score = 68.2 bits (165), Expect(2) = 1e-27
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = -2
Query: 557 AVCSRVIKQGSLVSAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDII 378
A+ ++V+K+G + S +Q + +T QEI L D APG DGY + FFK W II
Sbjct: 215 AINAQVMKRGPVSSRQQRIQLCTDITEQEIYSTLQSYGNDKAPGIDGYNALFFKHTWKII 274
Query: 377 HTDVEDAVLEFFQNGKMLKVWNRAVIIVIPK 285
DV +AV FF GK+ K +N ++ +IPK
Sbjct: 275 KKDVIEAVKNFFTTGKLFKPFNCTLVSLIPK 305
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 84.0 bits (206), Expect(2) = 2e-27
Identities = 42/95 (44%), Positives = 68/95 (71%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PKI + D++PI+C +TLYK+I+++L +RL+ +LS ++S QS F+ GR++A+NVL+
Sbjct: 512 PKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLL 571
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFV 7
DL+ YN + S ++KVDL+KA++ V EFV
Sbjct: 572 ATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFV 606
Score = 64.7 bits (156), Expect(2) = 2e-27
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = -2
Query: 497 IEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKV 318
+E + ++I AL + + + GPDG+ ++FF D+W I+ +V DA+ EFF +G +LK
Sbjct: 443 LESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQ 502
Query: 317 WNRAVIIVIPK 285
WN I++IPK
Sbjct: 503 WNATTIVLIPK 513
>ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660513 [Glycine max]
Length = 543
Score = 88.2 bits (217), Expect(2) = 8e-27
Identities = 44/109 (40%), Positives = 72/109 (66%)
Frame = -2
Query: 596 YTNLLGSCNNQRDAVCSRVIKQGSLVSAEQGKWIEEKVTRQEITQAL*GITCD*APGPDG 417
Y +L+G D+V ++++G ++ +Q K++ ++T +EI +AL I APG DG
Sbjct: 371 YGDLMGREEPNLDSVDINIMRKGCQLNFDQRKYLIGRITDEEIDKALKSIGDLKAPGIDG 430
Query: 416 YGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRAVIIVIPKSDHAE 270
YG++FFKDAW II +D DA+ EFF+ GKM + N +++I+IPK+ A+
Sbjct: 431 YGAKFFKDAWSIIKSDFTDAIREFFEKGKMYEPINTSLVILIPKNQEAK 479
Score = 58.5 bits (140), Expect(2) = 8e-27
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PK + DY+PI+C T+YK+ISKVL RL ++ +IV ++Q+ FV G+ I +L+
Sbjct: 473 PKNQEAKYARDYRPISCCTTIYKVISKVLTTRLSRVIKSIVHQSQAAFVPGQKIHDQILL 532
Query: 111 CQDLIILYNRE 79
+LI Y R+
Sbjct: 533 AYELIQGYERK 543
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 83.2 bits (204), Expect(2) = 2e-25
Identities = 39/95 (41%), Positives = 66/95 (69%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PKI + D++PI+C +T+YK+ISK+L +RL+ L +S +QS F+ GR +NVL+
Sbjct: 409 PKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLL 468
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFV 7
+L+ YN+++ + S ++KVDLRKA++ V +F+
Sbjct: 469 ATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFI 503
Score = 58.9 bits (141), Expect(2) = 2e-25
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = -2
Query: 497 IEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKV 318
++ + ++I A + + A GPDG+ +FF W II +V +A+ EFF +GK+LK
Sbjct: 340 LDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQ 399
Query: 317 WNRAVIIVIPKSDHA 273
WN +++IPK +A
Sbjct: 400 WNATNLVLIPKITNA 414
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 73.2 bits (178), Expect(2) = 5e-25
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = -1
Query: 258 YKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNRE 79
++PI+C + LYKI+SK+L NR+ +L TI+ E Q+ F+ + + N+ + Q+++ Y +
Sbjct: 337 FRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQEILRKYAWK 396
Query: 78 SSSKSYLMKVDLRKAYNIVE*EFV 7
SS L+K+DL KAY+ + EF+
Sbjct: 397 RSSPRCLLKIDLHKAYDSISWEFL 420
Score = 67.4 bits (163), Expect(2) = 5e-25
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = -2
Query: 482 TRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRAV 303
++QE+ + + + APGPDG+ FFK AW+II D+ +AV EFF GK+LK N A+
Sbjct: 262 SKQEVWNVISVMDNNKAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAI 321
Query: 302 IIVIPKSDHA 273
I +IPK D A
Sbjct: 322 IALIPKHDQA 331
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 80.9 bits (198), Expect(2) = 1e-24
Identities = 36/97 (37%), Positives = 64/97 (65%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PK+ S + +Y+ I C LYKIISKV+ NR+ ++ ++ ++Q F+ GR I++N+L+
Sbjct: 171 PKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHDVIHNVICDSQVGFILGRKISENILL 230
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFVKE 1
+L+ Y R++ S ++K+DL+K Y+ VE F+K+
Sbjct: 231 AHELVNSYTRKNISPRSMLKIDLQKVYDSVEWPFLKQ 267
Score = 58.5 bits (140), Expect(2) = 1e-24
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = -2
Query: 485 VTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRA 306
VT ++I AL I D APG DGY + FFK W II D+ + V FF+ GK+ K +N
Sbjct: 106 VTEEKIFAALQSIGNDKAPGIDGYNAFFFKYTWKIIKNDIIEVVQSFFKPGKLFKPFNCT 165
Query: 305 VIIVIPK 285
++ +IPK
Sbjct: 166 LVSLIPK 172
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 73.2 bits (178), Expect(2) = 1e-24
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = -1
Query: 258 YKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNRE 79
++PI+C + LYKI+SK+L NR+ +L TI+ E Q+ F+ R + N+ + Q+++ Y R+
Sbjct: 885 FRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARK 944
Query: 78 SSSKSYLMKVDLRKAYNIV 22
S L+K+DL KAY+ +
Sbjct: 945 RPSPRCLLKIDLHKAYDFI 963
Score = 65.9 bits (159), Expect(2) = 1e-24
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = -2
Query: 434 APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRAVIIVIPKSDHA 273
APGPDG+ FFK AW+I+ D+ AV EFF GK+LK N A+I++IPK D A
Sbjct: 826 APGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQA 879
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 80.5 bits (197), Expect(2) = 5e-24
Identities = 36/85 (42%), Positives = 61/85 (71%)
Frame = -1
Query: 261 DYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNR 82
DY+PI+C + LYK+ISK+L NRL+ +L + + +NQS FV R + +NVL+ +L+ Y++
Sbjct: 825 DYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHK 884
Query: 81 ESSSKSYLMKVDLRKAYNIVE*EFV 7
ES + MK+D+ KA++ V+ +F+
Sbjct: 885 ESVTPRCAMKIDISKAFDSVQWQFL 909
Score = 56.6 bits (135), Expect(2) = 5e-24
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = -2
Query: 497 IEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKV 318
+ +VT +EI + L + + +PGPDGY S+FFK W + D A+ FF G + K
Sbjct: 746 LTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKG 805
Query: 317 WNRAVIIVIPKSDHA 273
N ++ +IPK D A
Sbjct: 806 LNATILALIPKKDEA 820
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 79.7 bits (195), Expect(2) = 2e-23
Identities = 35/85 (41%), Positives = 61/85 (71%)
Frame = -1
Query: 261 DYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNR 82
DY+PI+C + +YK+ISK++ NRL+ +L T + +NQS FV R + +NVL+ +L+ Y++
Sbjct: 101 DYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHK 160
Query: 81 ESSSKSYLMKVDLRKAYNIVE*EFV 7
+S S MK+D+ KA++ V+ +F+
Sbjct: 161 DSISPRCAMKIDISKAFDSVQWQFL 185
Score = 55.5 bits (132), Expect(2) = 2e-23
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = -2
Query: 518 SAEQGKWIEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQ 339
SA + +VT +E + L + + PGPDGY S+FFK W I D A+ FF
Sbjct: 15 SATDQDMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFI 74
Query: 338 NGKMLKVWNRAVIIVIPKSDHA 273
G + K N ++ +IPK D A
Sbjct: 75 KGFLPKGLNATILALIPKKDEA 96
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 75.9 bits (185), Expect(2) = 3e-23
Identities = 34/96 (35%), Positives = 63/96 (65%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PK + DY+PI+C + +YK+ISK++ NRL+ +L ++ NQS FV R + +N+L+
Sbjct: 933 PKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLL 992
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFVK 4
+L+ Y++++ S +K+D+ KA++ V+ F+K
Sbjct: 993 ATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFLK 1028
Score = 58.5 bits (140), Expect(2) = 3e-23
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = -2
Query: 485 VTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKVWNRA 306
V+ +EI AL + D +PGPDGY S+F+K AWDII + AV FF+ G + K N
Sbjct: 868 VSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTT 927
Query: 305 VIIVIPKSDHAE 270
++ +IPK A+
Sbjct: 928 ILALIPKKLEAK 939
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 79.0 bits (193), Expect(2) = 4e-23
Identities = 36/95 (37%), Positives = 64/95 (67%)
Frame = -1
Query: 291 PKI*SCRGEGDYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLI 112
PK + + DY+PI+C + LYK+ISK++ NRL+ +L ++ENQS FV R + +N+L+
Sbjct: 165 PKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLL 224
Query: 111 CQDLIILYNRESSSKSYLMKVDLRKAYNIVE*EFV 7
+L+ Y+++S S +K+D+ KA++ V+ F+
Sbjct: 225 ATELVKDYHKDSISARCAIKIDISKAFDSVQWSFL 259
Score = 55.5 bits (132), Expect(2) = 4e-23
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = -2
Query: 497 IEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKV 318
+ +V+ +EI L + D +PGPDGY S+F+K WDII + V FFQ G + K
Sbjct: 96 LTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKG 155
Query: 317 WNRAVIIVIPK 285
N ++ +IPK
Sbjct: 156 INSIILALIPK 166
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 70.1 bits (170), Expect(2) = 5e-23
Identities = 35/87 (40%), Positives = 58/87 (66%)
Frame = -1
Query: 261 DYKPIAC*DTLYKIISKVLCNRLRFILSTIVSENQSDFVAGRTIAQNVLICQDLIILYNR 82
+++PI+C + +YK+ISK+L RL IL +S +QS FV GR + +NVL+ +L+ + +
Sbjct: 521 EFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQ 580
Query: 81 ESSSKSYLMKVDLRKAYNIVE*EFVKE 1
+ S ++KVDLRKA++ V F+ E
Sbjct: 581 ANISSRGVLKVDLRKAFDSVGWGFIIE 607
Score = 63.9 bits (154), Expect(2) = 5e-23
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = -2
Query: 497 IEEKVTRQEITQAL*GITCD*APGPDGYGSQFFKDAWDIIHTDVEDAVLEFFQNGKMLKV 318
+E +V+ +I + + +PGPDGY S+FFK W I+ + AV EFF++G++L
Sbjct: 442 LEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQ 501
Query: 317 WNRAVIIVIPKSDHAE 270
WN + ++PK +A+
Sbjct: 502 WNSTAVTMVPKKPNAD 517