BLASTX nr result

ID: Atropa21_contig00042784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042784
         (647 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243078.1| PREDICTED: uncharacterized protein LOC101256...    93   8e-17
ref|XP_006354267.1| PREDICTED: uncharacterized protein LOC102588...    73   8e-11
gb|ABI34371.1| Gag/pol polyprotein, 3'-partial, putative [Solanu...    73   8e-11
ref|XP_004251326.1| PREDICTED: uncharacterized protein LOC101268...    72   1e-10
ref|XP_004253406.1| PREDICTED: uncharacterized protein LOC101250...    70   7e-10
ref|XP_004250623.1| PREDICTED: uncharacterized protein LOC101263...    68   2e-09
gb|AAT39963.2| Polyprotein, putative [Solanum demissum]                63   6e-08
gb|EOY09468.1| Uncharacterized protein TCM_024883 [Theobroma cacao]    58   2e-06
ref|XP_004243097.1| PREDICTED: uncharacterized protein LOC101244...    57   6e-06
ref|XP_004237305.1| PREDICTED: uncharacterized protein LOC101264...    57   6e-06

>ref|XP_004243078.1| PREDICTED: uncharacterized protein LOC101256988 [Solanum
           lycopersicum]
          Length = 1128

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
 Frame = +2

Query: 2   NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQR-- 175
           +YNLL GR +IHM+ A+PS+L+Q +K++W   E+VIH +    ++ +  +P+L++  +  
Sbjct: 274 SYNLLLGRPFIHMAGAIPSTLHQVMKLVWRNEELVIHGK---RSHSDKQVPILDETPQTS 330

Query: 176 --HGFPCGRAGERHI*RSYLISS*VILYRMVASTILQNSFELGKSLKKDLHSITDPIPIP 349
             +      A +  +     + +   +Y+M+A+ +LQ+ FE G  L ++   I  P+P+ 
Sbjct: 331 DFYTVELVNATDEVLAPQTPMPA---VYKMIATVMLQSGFEPGSGLGRNAQGIIKPVPVL 387

Query: 350 KNYF*YSLRYVPSSEEASEEDRKKKGFPKAV*ANSEPVPVKMPMLNEDDAEEGIGMLFQE 529
            +   Y L Y+P+ ++   + R+ +   K +       PV+     ED+  EGI  LF E
Sbjct: 388 AHGSKYGLGYIPTDDDMKIKRRRDQELTKPIPHLYHSFPVREHAEPEDEG-EGICDLFNE 446

Query: 530 EEYLMV*QECGKAPTILKANSSEHLSNWTSTSLLVP 637
              ++  +E  +   I  A   + L NWTST +L+P
Sbjct: 447 INAVI--EEEAEPAGIRDAEPGDMLQNWTSTPILMP 480


>ref|XP_006354267.1| PREDICTED: uncharacterized protein LOC102588378 [Solanum tuberosum]
          Length = 1781

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
 Frame = +2

Query: 38  MSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKN-QRHGFPCGRAGERHI 214
           M+ A+PS+L Q +K +W+++E+VIH +G+  N   + +  +      +      A    +
Sbjct: 1   MAGAVPSTLNQLMKFVWKDHELVIHGEGSHFNGRASIVDEVSHGCDFYTVELVNATGNDL 60

Query: 215 *RSYLISS*VILYRMVASTILQNSFELGKSLKKDLHSITDPIPIPKNYF*YSLRYVPSSE 394
               L+ +   +Y+M+A+ +LQN FE G  L K    I +PI IP     + L YVP+ +
Sbjct: 61  ALQPLMPA---VYKMIATVMLQNGFEPGFGLWKHFQGIVEPIQIPAKEAKFGLGYVPTDD 117

Query: 395 EASEEDRKKKGFPKAV*ANSEPVPVKMPMLNEDDAEEGIGMLFQEEEYLMV*QECGKAPT 574
           EA   + K K   + +     P+P            +    LF+E +  ++  E G + +
Sbjct: 118 EA---EMKNKSIDQTL---VRPIP---------HLYQSFPGLFEEVD-AVIEDEVGTS-S 160

Query: 575 ILKANSSEHLSNWTSTSLLV 634
           I  A   E L NWTST LL+
Sbjct: 161 IRDAEPDEQLQNWTSTPLLI 180


>gb|ABI34371.1| Gag/pol polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 907

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
 Frame = +2

Query: 2    NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
            +YNLL GR W+H + A+PS+L+Q +K  ++  E+++H +G++  Y ++ +P ++ N  + 
Sbjct: 410  SYNLLLGRPWVHRAGAVPSTLHQMVKFEYDRQEVIVHSEGDLSVYKDSSLPFIKANNENE 469

Query: 182  FPCGRAGE----RHI*RSYLISS*VILYR--MVASTILQNSFELGKSLKKDLHSITDPIP 343
                +A E     HI    LIS   +     M+ + +L++ FE GK L   L     P+ 
Sbjct: 470  ALVYQAFEVVVVEHILEGNLISKPQLPMASVMMVNEMLKHGFEPGKGLGIFLQGRAYPVS 529

Query: 344  IPKNYF*YSLRYVPSSEEASEEDRKKKGFPKAV*ANSEPVPVKMPMLNEDDAEEGIGMLF 523
              K+   + L Y P +++  +  ++KK     V + ++P+P      N+    E    L 
Sbjct: 530  PRKSLGTFGLGYKPRAKDKMKAKKQKKD----VWSLTKPIPPIYKSFNKARTTESSESLL 585

Query: 524  QEEEYLMV*QECGKAPT---ILKANSSEHLSNWTSTSL 628
             E        E G+  +   +        L+NW +T L
Sbjct: 586  PEPVLEANMVELGEGTSDRDVQFIGPDVQLNNWEATPL 623


>ref|XP_004251326.1| PREDICTED: uncharacterized protein LOC101268646 [Solanum
           lycopersicum]
          Length = 1216

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
 Frame = +2

Query: 2   NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
           +YNLL GR W+H + A+PS+L+Q +K   +  E+++H +G++  Y ++  P ++ +  + 
Sbjct: 493 SYNLLLGRPWVHRTGAVPSTLHQMIKFEHDRQEVIVHGEGDLSIYKDSSFPFIDADNENE 552

Query: 182 FPCGRAGE----RHI*RSYLI--SS*VILYRMVASTILQNSFELGKSLKKDLHSITDPIP 343
               ++ E     H+    +I   +  I   MV + +L++ FE GK L   L     P+ 
Sbjct: 553 ALVYQSSEVVVIEHVPEGSVIPKPNMPIASVMVVNELLKHGFEPGKGLGICLQGRAYPVS 612

Query: 344 IPKNYF*YSLRYVPSSEEASEEDRKKK 424
           +PK+   + L Y P  E+  +E ++K+
Sbjct: 613 LPKSIGTFGLGYQPRVEDKMKEKKQKR 639


>ref|XP_004253406.1| PREDICTED: uncharacterized protein LOC101250587 [Solanum
           lycopersicum]
          Length = 1139

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
 Frame = +2

Query: 2   NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
           +YNLL GR W+H + A+PS+L+Q +K   +  E+++H +G++  Y ++  P +  +  + 
Sbjct: 184 SYNLLLGRPWVHKAGAVPSTLHQMIKFEHDRQEVIVHGEGDLSIYKDSSFPFINADNENE 243

Query: 182 FPCGRAGE----RHI*RSYLI--SS*VILYRMVASTILQNSFELGKSLKKDLHSITDPIP 343
               +A E     H+    +I   +  I   MV + +L++ FE GK L   L     P+ 
Sbjct: 244 ALVYQASEVVVIEHVPEGSVIPKPNMSIASVMVVNELLKHGFEPGKGLGICLQGRAYPVS 303

Query: 344 IPKNYF*YSLRYVPSSEEASEEDRKKK 424
           +PK+   + L Y P  E+  +  ++K+
Sbjct: 304 LPKSIGTFGLGYQPRVEDKIKAKKQKR 330


>ref|XP_004250623.1| PREDICTED: uncharacterized protein LOC101263077 [Solanum
            lycopersicum]
          Length = 778

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +2

Query: 2    NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
            +YNLL GR WIHM++A+PS+L+Q +K   ++ EI++H + ++    +  IP +E  +   
Sbjct: 582  SYNLLLGRPWIHMAKAVPSTLHQVVKFEHDKQEIIVHGEDDLPITRDPSIPCIEAKRGCE 641

Query: 182  FPCGRAGERHI*RSYLISS*VILYR------MVASTILQNSFELGKSLKKDLHSITDPIP 343
                +A E      +L  + ++  R      MV + ++QN +E GK L   L  I +PI 
Sbjct: 642  SLNYQALEIITVNQFLERNPILQPRLFSTSVMVVAQMVQNGYEPGKGLGLSLQGIVNPIS 701

Query: 344  IPKNYF*YSLRYVPSSEEAS-EEDRKKKGF----------PKAV*ANSEPVPVKMPMLNE 490
               N   +SL + P+  ++   +DRK+  +             + +  EP P  +P+ N+
Sbjct: 702  PMGNQDTFSLGFNPTRFDSKWAKDRKRNAWNLSKPIPHIAQSFIKSQGEPCP-DLPIQND 760

Query: 491  -DDAEEGIGMLFQE 529
             D+  +GI  +F E
Sbjct: 761  VDEMCQGIKEMFYE 774


>gb|AAT39963.2| Polyprotein, putative [Solanum demissum]
          Length = 1504

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
 Frame = +2

Query: 2   NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
           +YNLL GR W+H + A+PS+L+Q +K  ++  E+++H + ++  Y ++ +P ++ N  + 
Sbjct: 252 SYNLLLGRPWVHRAGAVPSTLHQMVKFEYDRQEVIVHCERDLSVYKDSSLPFIKANNENE 311

Query: 182 FPCGRAGE----RHI*RSYLISS*VILYR--MVASTILQNSFELGKSLKKDLHSITDPIP 343
               +A E     H     LIS   +     M+ + +L++ F+LGK L   L     P+ 
Sbjct: 312 ALVYQAFEVVVVEHNLEGNLISKPQLPMASVMMVNEMLKHGFKLGKGLGIFLQGRAYPVS 371

Query: 344 IPKNYF*YSLRYVPSSEEASEEDRKKKGFPKAV*ANSEPVP 466
             K+   + L Y P  E+  +  ++++     V + ++P+P
Sbjct: 372 PRKSLGTFGLGYKPRVEDKMKAKKQRRD----VWSLTKPIP 408


>gb|EOY09468.1| Uncharacterized protein TCM_024883 [Theobroma cacao]
          Length = 1804

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 63/234 (26%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
 Frame = +2

Query: 2    NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQR-- 175
            +YN L GR WIHM+ A+PSSL+Q +K + E   I +  + +I     +  P +E  +   
Sbjct: 1565 SYNCLLGRPWIHMAGAIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVP 1624

Query: 176  ----HGFPCGRA---GERHI*RSYLISS*VILYRMVASTILQNSFELGKSLKKDLHSITD 334
                  F    A   GER +  +  +S   +  +M     +     +G  L K+L  I  
Sbjct: 1625 ECSFRSFEFVNATYVGERKVIPTPRLS---VATKMGVKQTVGKGCRVGLGLGKNLQGINR 1681

Query: 335  PIPIPKNYF*YSLRYVPSSEEASE--EDRKKKGFPKAV*ANSEPVPVKMPMLNEDDAEEG 508
            P+   KN   + L Y P+ EE  +    +K K   +      E     +P L E     G
Sbjct: 1682 PLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKKEEFGERTIPHLYETFRSAG 1741

Query: 509  ------------IGMLFQEEEYLMV*QE--CGKAPTILKANSSEHLSNWTSTSL 628
                        +  +F E    M+  E   GK P +      E LSNWT+T L
Sbjct: 1742 FIHPEAPPKVNQVLRIFDELSIHMIRDEEPDGKIPVVYPVLPGEELSNWTATEL 1795


>ref|XP_004243097.1| PREDICTED: uncharacterized protein LOC101244200 [Solanum
           lycopersicum]
          Length = 733

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
           +YNLL GR WIHM+RA+ S+L+Q +K   ++ EI++H + ++    +  IP +E  +   
Sbjct: 113 SYNLLLGRPWIHMARAVHSTLHQVVKFEHDKQEIIVHGEDDLPITRDPSIPCIEAKRGCE 172

Query: 182 FPCGRAGERHI*RSYLISS*VI------LYRMVASTILQNSFELGKSLKKDLHSITDPI 340
                A E  +   +L  + ++       Y MV + ++QN +E  K L   L  I +PI
Sbjct: 173 SLNYHALEIIMINQFLEGNPILQPLLSSTYIMVVAQMVQNGYEPRKGLGLSLQGIVNPI 231


>ref|XP_004237305.1| PREDICTED: uncharacterized protein LOC101264208 [Solanum
            lycopersicum]
          Length = 772

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
 Frame = +2

Query: 2    NYNLLQGRSWIHMSRAMPSSLYQFLKILWEEYEIVIHRQGNIHNYPNNFIPVLEKNQRHG 181
            +YNLL GR WIHM +A+PS+L+Q +K   ++ EI++H + ++    +  IP +E  +   
Sbjct: 575  SYNLLLGRPWIHMEKAVPSTLHQVVKFEHDKQEIIVHGEDDLPITRDPSIPCIEAKRGCE 634

Query: 182  FPCGRAGERHI*RSYLISS*VILYR------MVASTILQNSFELGKSLKKDLHSITDPIP 343
                +A E      +L  + ++  R      MV + + QN +E  K L   L  I +PI 
Sbjct: 635  SLNYQALEIITVNQFLEGNPILQPRLSSTSVMVVAQMAQNGYEPRKGLGLSLQGIVNPIS 694

Query: 344  IPKNYF*YSLRYVPSSEEASEEDRKKK 424
               N   + L + P+  +    + +K+
Sbjct: 695  PMGNEDTFILGFNPTRFDRKWANYRKR 721


Top