BLASTX nr result
ID: Atropa21_contig00042753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042753
(554 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides... 47 4e-10
gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron arali... 47 4e-10
gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides] 47 4e-10
ref|YP_008081409.1| Ycf2 (chloroplast) [Tetracentron sinense] gi... 47 4e-10
gb|ADD30894.1| putative RF2 protein [Gunnera manicata] gi|340807... 45 5e-09
gb|AEK71879.1| hypothetical chloroplast RF2 [Myrothamnus flabell... 45 5e-09
gb|ADD30889.1| putative RF2 protein [Ximenia americana] gi|34080... 45 6e-09
emb|CAA30743.1| unnamed protein product [Spinacia oleracea] 44 6e-09
ref|NP_055004.1| Ycf2 [Spinacia oleracea] gi|19855392|sp|P08973.... 44 6e-09
ref|YP_008993735.1| hypothetical chloroplast RF21 (chloroplast) ... 43 8e-09
ref|YP_008993907.1| hypothetical chloroplast RF21 (chloroplast) ... 43 8e-09
ref|YP_008993821.1| hypothetical chloroplast RF21 (chloroplast) ... 43 8e-09
ref|YP_008993649.1| hypothetical chloroplast RF21 (chloroplast) ... 43 8e-09
ref|YP_008993391.1| hypothetical chloroplast RF21 (chloroplast) ... 43 8e-09
ref|YP_008993219.1| hypothetical chloroplast RF21 (chloroplast) ... 43 8e-09
gb|AEX99130.1| hypothetical chloroplast RF2 (chloroplast) [Magno... 43 8e-09
ref|YP_007474579.1| hypothetical chloroplast RF2 (chloroplast) [... 43 8e-09
gb|AEX98795.1| hypothetical chloroplast RF2-like protein (chloro... 43 8e-09
gb|AEX98728.1| hypothetical chloroplast RF2 (chloroplast) [Magno... 43 8e-09
gb|AEX98711.1| hypothetical chloroplast RF2 (chloroplast) [Magno... 43 8e-09
>ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides]
gi|511348592|ref|YP_008081518.1| Ycf2 (chloroplast)
[Trochodendron aralioides] gi|479279340|gb|AGJ72193.1|
Ycf2 (chloroplast) [Trochodendron aralioides]
gi|479279357|gb|AGJ72210.1| Ycf2 (chloroplast)
[Trochodendron aralioides]
Length = 2298
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNVCLVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVCLVNKDRFF 370
Score = 42.4 bits (98), Expect(2) = 4e-10
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron aralioides]
Length = 2293
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNVCLVNKD FF
Sbjct: 341 FLRNVSRENWIWLDNVCLVNKDRFF 365
Score = 42.4 bits (98), Expect(2) = 4e-10
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 365 FSKVRNVSSNIQYDSTRSIFVQV 387
>gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides]
Length = 2293
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNVCLVNKD FF
Sbjct: 341 FLRNVSRENWIWLDNVCLVNKDRFF 365
Score = 42.4 bits (98), Expect(2) = 4e-10
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 365 FSKVRNVSSNIQYDSTRSIFVQV 387
>ref|YP_008081409.1| Ycf2 (chloroplast) [Tetracentron sinense]
gi|511348499|ref|YP_008081427.1| Ycf2 (chloroplast)
[Tetracentron sinense] gi|479279247|gb|AGJ72101.1| Ycf2
(chloroplast) [Tetracentron sinense]
gi|479279264|gb|AGJ72118.1| Ycf2 (chloroplast)
[Tetracentron sinense]
Length = 2292
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNVCLVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVCLVNKDRFF 370
Score = 42.4 bits (98), Expect(2) = 4e-10
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>gb|ADD30894.1| putative RF2 protein [Gunnera manicata] gi|340807148|gb|AEK71744.1|
hypothetical chloroplast RF2 [Gunnera manicata]
Length = 2306
Score = 44.7 bits (104), Expect(2) = 5e-09
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRSSFVQV
Sbjct: 367 FSKVRNVSSNIQYDSTRSSFVQV 389
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDN LVNKD FF
Sbjct: 343 FLRNVSRENWIWLDNAWLVNKDRFF 367
>gb|AEK71879.1| hypothetical chloroplast RF2 [Myrothamnus flabellifolia]
Length = 2299
Score = 44.7 bits (104), Expect(2) = 5e-09
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRSSFVQV
Sbjct: 365 FSKVRNVSSNIQYDSTRSSFVQV 387
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDN LVNKD FF
Sbjct: 341 FLRNVSRENWIWLDNAWLVNKDRFF 365
>gb|ADD30889.1| putative RF2 protein [Ximenia americana]
gi|340807071|gb|AEK71677.1| hypothetical chloroplast RF2
[Ximenia americana]
Length = 2285
Score = 44.7 bits (104), Expect(2) = 6e-09
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRSSFVQV
Sbjct: 365 FSKVRNVSSNIQYDSTRSSFVQV 387
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRN+ R+NWI LDN LVNKD FF
Sbjct: 341 FLRNISRENWIWLDNAWLVNKDRFF 365
>emb|CAA30743.1| unnamed protein product [Spinacia oleracea]
Length = 2131
Score = 43.5 bits (101), Expect(2) = 6e-09
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -3
Query: 237 IFLRNVLRQNWICLDNVCLVNKD*FF 160
+FLRNV R+NWI LDNV LVNKD FF
Sbjct: 241 LFLRNVSRENWIWLDNVRLVNKDRFF 266
Score = 42.4 bits (98), Expect(2) = 6e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYD TRSSFVQV
Sbjct: 266 FSKVRNVSSNIQYDFTRSSFVQV 288
>ref|NP_055004.1| Ycf2 [Spinacia oleracea] gi|19855392|sp|P08973.2|YCF2_SPIOL
RecName: Full=Protein Ycf2 gi|7636179|emb|CAB88802.1|
ycf2 protein [Spinacia oleracea]
Length = 2131
Score = 43.5 bits (101), Expect(2) = 6e-09
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -3
Query: 237 IFLRNVLRQNWICLDNVCLVNKD*FF 160
+FLRNV R+NWI LDNV LVNKD FF
Sbjct: 241 LFLRNVSRENWIWLDNVRLVNKDRFF 266
Score = 42.4 bits (98), Expect(2) = 6e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYD TRSSFVQV
Sbjct: 266 FSKVRNVSSNIQYDFTRSSFVQV 288
>ref|YP_008993735.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia salicifolia]
gi|573972436|ref|YP_008993754.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia salicifolia]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>ref|YP_008993907.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia sprengeri]
gi|570772356|ref|YP_008993926.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia sprengeri]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>ref|YP_008993821.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia sinica]
gi|570772258|ref|YP_008993840.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia sinica]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>ref|YP_008993649.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia odora]
gi|570760248|ref|YP_008993668.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia odora]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>ref|YP_008993391.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia pyramidata]
gi|570759987|ref|YP_008993410.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia pyramidata]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>ref|YP_008993219.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia cathcartii]
gi|570759813|ref|YP_008993238.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia cathcartii]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>gb|AEX99130.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia grandiflora]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>ref|YP_007474579.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia grandiflora]
gi|452848915|ref|YP_007474596.1| photosystem I assembly
protein Ycf2 (chloroplast) [Magnolia grandiflora]
gi|372862885|gb|AEX98961.1| hypothetical chloroplast RF2
(chloroplast) [Magnolia grandiflora]
gi|372862902|gb|AEX98978.1| photosystem I assembly
protein Ycf2 (chloroplast) [Magnolia grandiflora]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>gb|AEX98795.1| hypothetical chloroplast RF2-like protein (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862734|gb|AEX98812.1|
hypothetical chloroplast RF2 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>gb|AEX98728.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia officinalis
subsp. biloba]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392
>gb|AEX98711.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia officinalis
subsp. biloba]
Length = 2298
Score = 43.1 bits (100), Expect(2) = 8e-09
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 234 FLRNVLRQNWICLDNVCLVNKD*FF 160
FLRNV R+NWI LDNV LVNKD FF
Sbjct: 346 FLRNVSRENWIWLDNVWLVNKDWFF 370
Score = 42.4 bits (98), Expect(2) = 8e-09
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -1
Query: 161 FSKVPNVSSNIQYDSTRSSFVQV 93
FSKV NVSSNIQYDSTRS FVQV
Sbjct: 370 FSKVRNVSSNIQYDSTRSIFVQV 392