BLASTX nr result

ID: Atropa21_contig00042720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042720
         (955 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351308.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    72   2e-14
ref|XP_004249255.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    73   3e-14
ref|XP_006350258.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    62   1e-10
ref|XP_006354839.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    62   2e-10
ref|XP_004236598.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    59   2e-09

>ref|XP_006351308.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum
           tuberosum]
          Length = 531

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = +1

Query: 259 PWHSQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDE 405
           P  +QIGPTYK V+V ERPRD  TWLTAKREA+ E+L+GL+ML QIYDE
Sbjct: 292 PGIAQIGPTYKAVAVKERPRDFSTWLTAKREAQVESLDGLSMLDQIYDE 340



 Score = 33.9 bits (76), Expect(2) = 2e-14
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +2

Query: 227 VGETQFHVVLSPGIPKLG 280
           +GETQFHVVL+PGI ++G
Sbjct: 281 IGETQFHVVLAPGIAQIG 298


>ref|XP_004249255.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum
           lycopersicum]
          Length = 525

 Score = 72.8 bits (177), Expect(2) = 3e-14
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = +1

Query: 259 PWHSQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDE 405
           P  +QIGPTYK V+V ERPRD  TWLTAKREA+ E+L+GLTM  QIYDE
Sbjct: 292 PGMAQIGPTYKAVAVRERPRDFSTWLTAKREAQVESLDGLTMFDQIYDE 340



 Score = 33.1 bits (74), Expect(2) = 3e-14
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +2

Query: 227 VGETQFHVVLSPGIPKLG 280
           VGETQFHVVL+PG+ ++G
Sbjct: 281 VGETQFHVVLAPGMAQIG 298


>ref|XP_006350258.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum
           tuberosum]
          Length = 534

 Score = 62.4 bits (150), Expect(2) = 1e-10
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +1

Query: 268 SQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDEVR*NN 420
           S IGPTYK VSV ER  D  TWLTAKREA + +L+G T+L QIYDE+  +N
Sbjct: 297 SSIGPTYKAVSVRERSSDYSTWLTAKREAVHGSLDGQTILDQIYDELGGHN 347



 Score = 30.8 bits (68), Expect(2) = 1e-10
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 227 VGETQFHVVLSPGIPKLG 280
           VGETQFHV+LS GI  +G
Sbjct: 283 VGETQFHVMLSTGISSIG 300


>ref|XP_006354839.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum
           tuberosum]
          Length = 194

 Score = 62.4 bits (150), Expect(2) = 2e-10
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +1

Query: 268 SQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDEVR*NN 420
           S IGPTYK VSV ER  D  TWLTAKREA + +L+G T+L QIYDE+  +N
Sbjct: 109 SSIGPTYKAVSVRERSSDYSTWLTAKREAVHGSLDGQTILDQIYDELGGHN 159



 Score = 30.8 bits (68), Expect(2) = 2e-10
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 227 VGETQFHVVLSPGIPKLG 280
           VGETQFHV+LS GI  +G
Sbjct: 95  VGETQFHVMLSTGISSIG 112


>ref|XP_004236598.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum
           lycopersicum]
          Length = 534

 Score = 58.9 bits (141), Expect(2) = 2e-09
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = +1

Query: 268 SQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDEVR*NN 420
           S IGPTYK VSV  R  D  TWLTAKREA + +L+G T+L QIYDE+  +N
Sbjct: 297 SSIGPTYKAVSVRGRSCDYSTWLTAKREAVHGSLDGQTILDQIYDELGGHN 347



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 227 VGETQFHVVLSPGIPKLG 280
           VGETQFHV+LS GI  +G
Sbjct: 283 VGETQFHVMLSTGISSIG 300


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