BLASTX nr result
ID: Atropa21_contig00042720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00042720 (955 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006351308.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 72 2e-14 ref|XP_004249255.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 73 3e-14 ref|XP_006350258.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 62 1e-10 ref|XP_006354839.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 62 2e-10 ref|XP_004236598.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 59 2e-09 >ref|XP_006351308.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum tuberosum] Length = 531 Score = 72.4 bits (176), Expect(2) = 2e-14 Identities = 35/49 (71%), Positives = 41/49 (83%) Frame = +1 Query: 259 PWHSQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDE 405 P +QIGPTYK V+V ERPRD TWLTAKREA+ E+L+GL+ML QIYDE Sbjct: 292 PGIAQIGPTYKAVAVKERPRDFSTWLTAKREAQVESLDGLSMLDQIYDE 340 Score = 33.9 bits (76), Expect(2) = 2e-14 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = +2 Query: 227 VGETQFHVVLSPGIPKLG 280 +GETQFHVVL+PGI ++G Sbjct: 281 IGETQFHVVLAPGIAQIG 298 >ref|XP_004249255.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum lycopersicum] Length = 525 Score = 72.8 bits (177), Expect(2) = 3e-14 Identities = 35/49 (71%), Positives = 40/49 (81%) Frame = +1 Query: 259 PWHSQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDE 405 P +QIGPTYK V+V ERPRD TWLTAKREA+ E+L+GLTM QIYDE Sbjct: 292 PGMAQIGPTYKAVAVRERPRDFSTWLTAKREAQVESLDGLTMFDQIYDE 340 Score = 33.1 bits (74), Expect(2) = 3e-14 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = +2 Query: 227 VGETQFHVVLSPGIPKLG 280 VGETQFHVVL+PG+ ++G Sbjct: 281 VGETQFHVVLAPGMAQIG 298 >ref|XP_006350258.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum tuberosum] Length = 534 Score = 62.4 bits (150), Expect(2) = 1e-10 Identities = 32/51 (62%), Positives = 38/51 (74%) Frame = +1 Query: 268 SQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDEVR*NN 420 S IGPTYK VSV ER D TWLTAKREA + +L+G T+L QIYDE+ +N Sbjct: 297 SSIGPTYKAVSVRERSSDYSTWLTAKREAVHGSLDGQTILDQIYDELGGHN 347 Score = 30.8 bits (68), Expect(2) = 1e-10 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +2 Query: 227 VGETQFHVVLSPGIPKLG 280 VGETQFHV+LS GI +G Sbjct: 283 VGETQFHVMLSTGISSIG 300 >ref|XP_006354839.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum tuberosum] Length = 194 Score = 62.4 bits (150), Expect(2) = 2e-10 Identities = 32/51 (62%), Positives = 38/51 (74%) Frame = +1 Query: 268 SQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDEVR*NN 420 S IGPTYK VSV ER D TWLTAKREA + +L+G T+L QIYDE+ +N Sbjct: 109 SSIGPTYKAVSVRERSSDYSTWLTAKREAVHGSLDGQTILDQIYDELGGHN 159 Score = 30.8 bits (68), Expect(2) = 2e-10 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +2 Query: 227 VGETQFHVVLSPGIPKLG 280 VGETQFHV+LS GI +G Sbjct: 95 VGETQFHVMLSTGISSIG 112 >ref|XP_004236598.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum lycopersicum] Length = 534 Score = 58.9 bits (141), Expect(2) = 2e-09 Identities = 31/51 (60%), Positives = 37/51 (72%) Frame = +1 Query: 268 SQIGPTYKVVSVGERPRDNCTWLTAKREARYENLNGLTMLIQIYDEVR*NN 420 S IGPTYK VSV R D TWLTAKREA + +L+G T+L QIYDE+ +N Sbjct: 297 SSIGPTYKAVSVRGRSCDYSTWLTAKREAVHGSLDGQTILDQIYDELGGHN 347 Score = 30.8 bits (68), Expect(2) = 2e-09 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +2 Query: 227 VGETQFHVVLSPGIPKLG 280 VGETQFHV+LS GI +G Sbjct: 283 VGETQFHVMLSTGISSIG 300