BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042701
         (482 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    84   8e-20
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    79   4e-19
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    79   2e-17
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    53   2e-10

>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 1035

 Score = 83.6 bits (205), Expect(2) = 8e-20
 Identities = 42/120 (35%), Positives = 68/120 (56%)
 Frame = -1

Query: 482 LQHITRTIIPPITDKGMNKYWWLMDNR*EFTVRSI*NYVRLRSNELEIYKYIWVKGLPFN 303
           ++HI   I P  +++G++K WW  +    FTV+S  + +R R  E E  +Y+W+KG+P  
Sbjct: 445 VEHIILNIRPKTSEEGIDKAWWCGNLTGLFTVKSAYHRIRGRKEEEEWRRYMWIKGMPIK 504

Query: 302 IYIFM*RC*KFKMPVYDILKKINYNMVSRCWCCSTPEEKITQHLFLNLYVANKV*FYFCS 123
           I  F+ R  + K+  YD LK++   +VS+C+CC   E +   HL L   +A K+   F S
Sbjct: 505 ISFFLWRVWRRKIATYDNLKRMKIPVVSKCYCCKEGEMETMTHLLLTAPIAQKLWKQFAS 564



 Score = 38.9 bits (89), Expect(2) = 8e-20
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = -3

Query: 117 GISMEGL*LQ*LIIKWWQVPAIRRLT*GFRAVPAIIIWE 1
           GI + GL LQ LI KWW   A  +L+   +AV A+I+WE
Sbjct: 567 GIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWE 605


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 885

 Score = 79.0 bits (193), Expect(2) = 4e-19
 Identities = 44/116 (37%), Positives = 59/116 (50%)
 Frame = -1

Query: 476 HITRTIIPPITDKGMNKYWWLMDNR*EFTVRSI*NYVRLRSNELEIYKYIWVKGLPFNIY 297
           HI   I PP T  G +  WW+ + +  FTV+S     R +       + IW K LPF I 
Sbjct: 476 HIMENISPPNTLFGNDVVWWMANAQGIFTVKSAWQITRNKQEVRRDCEVIWNKELPFKIN 535

Query: 296 IFM*RC*KFKMPVYDILKKINYNMVSRCWCCSTPEEKITQHLFLNLYVANKV*FYF 129
            FM R  K ++   D LKK+  N+VSRCWCC   +E+   HLF    +  K+  YF
Sbjct: 536 FFMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEETMTHLFPTAPITYKLWRYF 591



 Score = 41.2 bits (95), Expect(2) = 4e-19
 Identities = 18/38 (47%), Positives = 28/38 (73%)
 Frame = -3

Query: 117 GISMEGL*LQ*LIIKWWQVPAIRRLT*GFRAVPAIIIW 4
           GI+++G+ LQ LII WW+  A  +L   ++A+PAII+W
Sbjct: 596 GINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMW 633


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 79.3 bits (194), Expect(2) = 2e-17
 Identities = 38/112 (33%), Positives = 62/112 (55%)
 Frame = -1

Query: 476  HITRTIIPPITDKGMNKYWWLMDNR*EFTVRSI*NYVRLRSNELEIYKYIWVKGLPFNIY 297
            +I  +I PP+ +   +  WW+   +  FTV+S    +R +      Y+ IW K +PF + 
Sbjct: 853  YIMESIKPPLEEYINDVAWWMGSTQGIFTVKSAWELMRHKQERRTDYQLIWTKDVPFKMN 912

Query: 296  IFM*RC*KFKMPVYDILKKINYNMVSRCWCCSTPEEKITQHLFLNLYVANKV 141
             F+ R  K ++   D LK++   +VSRCWCCS  EE+   H+FL   +AN++
Sbjct: 913  FFLWRLWKRRIATDDNLKRMKIQIVSRCWCCSETEEETMTHIFLTAPIANRL 964



 Score = 35.0 bits (79), Expect(2) = 2e-17
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -3

Query: 117  GISMEGL*LQ*LIIKWWQVPAIRRLT*GFRAVPAIIIW 4
            GI +E + LQ LII WW+     +L    RA+P II+W
Sbjct: 973  GIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMW 1010


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 53.1 bits (126), Expect(2) = 2e-10
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -1

Query: 275 KFKMPVYDILKKINYNMVSRCWCCSTPEEKITQHLFLNLYVANKV*FYFCS 123
           KFK+PV ++++ +  N+VSRCWCC   + +   HLFL  Y A K+   F +
Sbjct: 3   KFKVPVDEVVQSMGINLVSRCWCCIQSKSETMSHLFLTFYTAAKLWILFAN 53



 Score = 37.4 bits (85), Expect(2) = 2e-10
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -3

Query: 117 GISMEGL*LQ*LIIKWWQVPAIRRLT*GFRAVPAIIIW 4
           GIS+EGL L  ++IKWW   +   L    R VP ++IW
Sbjct: 56  GISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIW 93