BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042700
         (541 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat...   282   3e-74
ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat...   259   4e-67
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]   172   5e-41
emb|CBI38188.3| unnamed protein product [Vitis vinifera]              170   2e-40
gb|EXC25511.1| hypothetical protein L484_009819 [Morus notabilis]     162   4e-38
gb|EOX99670.1| Tetratricopeptide repeat-like superfamily protein...   159   5e-37
gb|EPS67966.1| hypothetical protein M569_06805 [Genlisea aurea]       154   1e-35
ref|XP_002304652.2| pentatricopeptide repeat-containing family p...   152   6e-35
gb|EMJ27928.1| hypothetical protein PRUPE_ppa019364mg, partial [...   152   6e-35
ref|XP_006483017.1| PREDICTED: putative pentatricopeptide repeat...   147   2e-33
ref|XP_006438846.1| hypothetical protein CICLE_v10033965mg [Citr...   147   2e-33
gb|AHB18406.1| pentatricopeptide repeat-containing protein [Goss...   144   1e-32
ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...   142   4e-32
ref|XP_002871555.1| pentatricopeptide repeat-containing protein ...   140   2e-31
ref|NP_196827.1| pentatricopeptide repeat-containing protein [Ar...   134   2e-29
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ...   133   2e-29
ref|XP_003529187.2| PREDICTED: putative pentatricopeptide repeat...   130   3e-28
ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat...   127   2e-27
ref|XP_006290117.1| hypothetical protein CARUB_v10003764mg [Caps...   124   1e-26
ref|XP_006399813.1| hypothetical protein EUTSA_v10012703mg [Eutr...   123   2e-26

>ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Solanum tuberosum]
          Length = 830

 Score =  282 bits (722), Expect = 3e-74
 Identities = 136/168 (80%), Positives = 149/168 (88%)
 Frame = +2

Query: 38  MLRYVVGRRQPWTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANV 217
           MLRYV+GRRQPWTGFAT  ASHFW L  HCQFSSQSL  +K+QYTN E+ SF+SSAYANV
Sbjct: 1   MLRYVLGRRQPWTGFATFPASHFWALSWHCQFSSQSLPLSKEQYTNLEISSFNSSAYANV 60

Query: 218 LQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNV 397
           LQNCIKNR F  GKALHCD+LKRGGCLDLFG+NILLN Y+KSELLHDA QLFDEMST+NV
Sbjct: 61  LQNCIKNRDFIVGKALHCDVLKRGGCLDLFGQNILLNFYIKSELLHDAVQLFDEMSTKNV 120

Query: 398 VSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           VSFVTL+QG+LQ ++Y TAV LFVRLHREGHELNPF FTTILKVLV M
Sbjct: 121 VSFVTLLQGHLQAEEYITAVELFVRLHREGHELNPFVFTTILKVLVGM 168



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 44/157 (28%), Positives = 75/157 (47%)
 Frame = +2

Query: 71  WTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFT 250
           WTG  T  A +         +  ++L    Q      +P+  +  + +V++ C+  +   
Sbjct: 224 WTGMVTCYAEN--------DYFEEALGCFSQMRLAGWMPN--NYTFTSVIKACLGLQAID 273

Query: 251 PGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYL 430
            GK++H  ILK    +D      LL+LY KS  L+DAA +F E+  R+VV +  +I  Y 
Sbjct: 274 VGKSVHGCILKTRYEMDPSVGISLLDLYCKSGGLNDAACVFQEIPERDVVHWSFIIARYS 333

Query: 431 QEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           Q D+   A+  F ++ R     N F F ++L+   S+
Sbjct: 334 QSDRCDEALKFFSQMRRALIVPNQFTFASVLQACASV 370



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           +A+VLQ C        G  +HC + K G   D+F +N L+++Y K   + +   +F E  
Sbjct: 360 FASVLQACASVEALDLGMQIHCYVTKFGLDSDVFVRNALMDVYAKCGKVENTVDMFLETE 419

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
             N VS+ T+I G++Q      A+ LF+ +H      +   ++++L+   ++
Sbjct: 420 NINDVSWNTIIVGHVQCGDGEKALALFIDMHEAQVRASSVTYSSLLRACATL 471


>ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Solanum lycopersicum]
          Length = 829

 Score =  259 bits (661), Expect = 4e-67
 Identities = 129/168 (76%), Positives = 143/168 (85%)
 Frame = +2

Query: 38  MLRYVVGRRQPWTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANV 217
           MLRYV+ R QPW  FAT  ASH W L+ H QFSSQSL+ +K QYTN E+ SF+SS YANV
Sbjct: 1   MLRYVLARTQPWKRFATFPASHCWALW-HRQFSSQSLYLSKGQYTNLEISSFNSSTYANV 59

Query: 218 LQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNV 397
           LQNCIKNR F  GKALHCD+LKRGGCLDLFG+NILLNLYVKSELLHDA QLFDE+ST+NV
Sbjct: 60  LQNCIKNRDFIVGKALHCDVLKRGGCLDLFGQNILLNLYVKSELLHDAVQLFDEISTKNV 119

Query: 398 VSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           VSFVTL+QG+LQ ++Y TAV LF RLHREGHELNPF FTTILKVLV M
Sbjct: 120 VSFVTLLQGHLQAEEYITAVELFNRLHREGHELNPFVFTTILKVLVGM 167



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           +A+VLQ C        G  +HC + K G   D+F +N L+++Y K   + +   +F E  
Sbjct: 359 FASVLQACASVEALDLGMQIHCYVTKFGLDSDVFVRNALMDVYAKCGKVENTVDMFLETE 418

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
             N VS+ T+I G++Q      A+ LF+ +H      +   ++++L+   ++
Sbjct: 419 NINDVSWNTIIVGHVQCGDGEKALALFIDMHEAQGRASSVTYSSLLRACATL 470


>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  172 bits (436), Expect = 5e-41
 Identities = 87/148 (58%), Positives = 108/148 (72%)
 Frame = +2

Query: 98  SHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDI 277
           ++F + F    FS QS   T++   +     F+S AYAN LQ+CI+    + GK LHC+I
Sbjct: 5   NNFLIRFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 278 LKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAV 457
           LKRGGCLDLF  NILLN+YVKS+ L DA++LFDEM  RN +SFVTLIQGY +  ++  A+
Sbjct: 65  LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124

Query: 458 GLFVRLHREGHELNPFAFTTILKVLVSM 541
            LFVRLHREGHELNPF FTTILK+LVSM
Sbjct: 125 ELFVRLHREGHELNPFVFTTILKLLVSM 152



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/157 (28%), Positives = 75/157 (47%)
 Frame = +2

Query: 71  WTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFT 250
           WTG  T  A +       C F      F++ +    +  +F    +A+V + C+    F 
Sbjct: 208 WTGMVTCFAEN------DC-FKEALKLFSQMRMVGFKPNNF---TFASVFKACLGLEAFD 257

Query: 251 PGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYL 430
            GK++H   LK    LDL+    LL+LY KS  + DA   F+E+  ++V+ +  +I  Y 
Sbjct: 258 VGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYA 317

Query: 431 QEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           Q D+   AV +F ++ +     N F F ++L+   +M
Sbjct: 318 QSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATM 354


>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  170 bits (431), Expect = 2e-40
 Identities = 86/147 (58%), Positives = 107/147 (72%)
 Frame = +2

Query: 98  SHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDI 277
           ++F + F    FS QS   T++   +     F+S AYAN LQ+CI+    + GK LHC+I
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 278 LKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAV 457
           LKRGGCLDLF  NILLN+YVKS+ L DA++LFDEM  RN +SFVTLIQGY +  ++  A+
Sbjct: 65  LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124

Query: 458 GLFVRLHREGHELNPFAFTTILKVLVS 538
            LFVRLHREGHELNPF FTTILK+LVS
Sbjct: 125 ELFVRLHREGHELNPFVFTTILKLLVS 151



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/157 (28%), Positives = 76/157 (48%)
 Frame = +2

Query: 71  WTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFT 250
           WTG  T  A +       C F      F++ +    +  +F    +A+V + C+    F 
Sbjct: 208 WTGMVTCFAEN------DC-FKEALKLFSQMRMVGFKPNNF---TFASVFKACLGLEAFD 257

Query: 251 PGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYL 430
            GK++H   LK    LDL+    LL+LY KS  + DA + F+E+  ++V+ +  +I  Y 
Sbjct: 258 VGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYA 317

Query: 431 QEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           Q D+   AV +F ++ +     N F F ++L+   +M
Sbjct: 318 QSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATM 354


>gb|EXC25511.1| hypothetical protein L484_009819 [Morus notabilis]
          Length = 833

 Score =  162 bits (411), Expect = 4e-38
 Identities = 82/171 (47%), Positives = 114/171 (66%), Gaps = 3/171 (1%)
 Frame = +2

Query: 38  MLRYVVGRRQPWTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTE---LPSFDSSAY 208
           M+R    R  P+T  A  S  + W+      FSS ++  T+Q  ++ +   +P FDS +Y
Sbjct: 1   MIRLFCQRTLPYTNPAVHSRINSWISRSQRGFSSLAVQLTQQCSSHADESPMPDFDSHSY 60

Query: 209 ANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMST 388
           A +L+ C++ R  T G  LHC+ILKRG CLDLF  NILLN+YVKS  + DA +LF+EM  
Sbjct: 61  AAILKECVRKRDSTEGFRLHCEILKRGNCLDLFASNILLNVYVKSGSISDANKLFEEMPQ 120

Query: 389 RNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           RN +SFVTL+QG+ +  +++ A+ LF+RLHREGHELN F FT+ LK+LV M
Sbjct: 121 RNTISFVTLLQGFSESQRFSEALDLFLRLHREGHELNTFVFTSTLKLLVRM 171


>gb|EOX99670.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 833

 Score =  159 bits (401), Expect = 5e-37
 Identities = 84/141 (59%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
 Frame = +2

Query: 125 CQFSSQSLHFTKQQYT--NTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCL 298
           C FS+Q+   T+Q  T  N     F+S AY  +LQ CI+N        LH +ILKRG CL
Sbjct: 31  CGFSAQAAKQTQQSPTFINEPCSCFNSHAYGALLQRCIQNDDPISAMGLHSEILKRGNCL 90

Query: 299 DLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLH 478
           DLF  NILLN+YVK++LL +A  LFDEM  RN +SFVTLIQGY Q  ++  AVGLF RLH
Sbjct: 91  DLFATNILLNMYVKAQLLSEAEILFDEMPERNTISFVTLIQGYTQSLQFVEAVGLFTRLH 150

Query: 479 REGHELNPFAFTTILKVLVSM 541
           REGHELNPF FT+ILKVLVSM
Sbjct: 151 REGHELNPFVFTSILKVLVSM 171



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = +2

Query: 107 WVLFPHCQFSSQSLHFTKQQYTNTELPSF--DSSAYANVLQNCIKNRIFTPGKALHCDIL 280
           W     C   +       + +++  L  F  ++  +A V + CI    F   K +H  IL
Sbjct: 227 WTGMVACYAENDFFEEALEVFSHMRLIGFKPNNFTFAGVFKACIGLEAFDVAKGVHGCIL 286

Query: 281 KRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVG 460
           K     D++    LL LY KS  + +A ++F+E+  ++V+ +  +I  + Q ++   AV 
Sbjct: 287 KARYEHDIYVGVALLELYTKSGNIGNAQRVFEEIPKKDVIPWSFMISRFAQSNQSEVAVS 346

Query: 461 LFVRLHREGHELNPFAFTTILKVLVSM 541
           LF R+ R     N F F + L+   +M
Sbjct: 347 LFCRMRRAFVVPNQFTFASALQACATM 373


>gb|EPS67966.1| hypothetical protein M569_06805 [Genlisea aurea]
          Length = 883

 Score =  154 bits (390), Expect = 1e-35
 Identities = 78/137 (56%), Positives = 102/137 (74%)
 Frame = +2

Query: 131 FSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFG 310
           FSS +L    ++  ++ +  FDS AY ++L+NC++N     GK LHCD+LKRG CLDLFG
Sbjct: 83  FSSAALGIRWKRLLSSTM-DFDSVAYGSMLRNCVENGDPAGGKFLHCDVLKRGSCLDLFG 141

Query: 311 KNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGH 490
            NILLNLY+K  LL +  +LFDEM  RNVVSFVT+IQGY   + ++ ++GLF RL REGH
Sbjct: 142 WNILLNLYMKHGLLLEGRKLFDEMPERNVVSFVTMIQGYSDLEMHSASIGLFSRLRREGH 201

Query: 491 ELNPFAFTTILKVLVSM 541
           ELNPF FTTILK+LV++
Sbjct: 202 ELNPFVFTTILKLLVAL 218



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/106 (33%), Positives = 60/106 (56%)
 Frame = +2

Query: 209 ANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMST 388
           A+VLQ+C        G  +H  ++K G  L++F  N L+++Y KS ++  +A LF+    
Sbjct: 412 ASVLQSCATIGNLDLGIQIHSRMVKTGLDLNVFACNALMDVYAKSGMMKASADLFEYSRN 471

Query: 389 RNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILK 526
           RN VS+ T+  GY+Q     TA GLF+ + REG +     ++ +L+
Sbjct: 472 RNDVSWNTMAVGYVQLGDGETAFGLFLDMRREGVKPTDVTYSCLLR 517


>ref|XP_002304652.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343311|gb|EEE79631.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 820

 Score =  152 bits (383), Expect = 6e-35
 Identities = 77/143 (53%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
 Frame = +2

Query: 122 HCQFSSQSLHFTKQ----QYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRG 289
           HC+ ++     T++    Q T+   P F++  Y ++LQ+CI+N     GK LHC+I+K+G
Sbjct: 15  HCKSNTALCIITQRTFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKG 74

Query: 290 GCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFV 469
            CLDLF  NILLN YVK + L DAA+LFDEM  RN VSFVTLIQGY Q  +++ A+GLF 
Sbjct: 75  NCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFS 134

Query: 470 RLHREGHELNPFAFTTILKVLVS 538
           RL  EGHELNPF F+T+LK+LVS
Sbjct: 135 RLQGEGHELNPFVFSTVLKLLVS 157



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
 Frame = +2

Query: 107 WVLFPHCQFSSQSLHFTKQQYTNTELPSF--DSSAYANVLQNCIKNRIFTPGKALHCDIL 280
           W     C   ++    + + ++   +  F  ++  +A+VL+ C+   +F  GKA+H    
Sbjct: 214 WTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAF 273

Query: 281 KRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVG 460
           K     +LF    L++LY+KS  + DA Q+F+EM   +V+ +  +I  Y Q ++   A+ 
Sbjct: 274 KTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIE 333

Query: 461 LFVRLHREGHELNPFAFTTILKVLVSM 541
           +F R+ R     N F   ++L+   S+
Sbjct: 334 MFCRMRRGLVLPNQFTLASLLQACASL 360


>gb|EMJ27928.1| hypothetical protein PRUPE_ppa019364mg, partial [Prunus persica]
          Length = 824

 Score =  152 bits (383), Expect = 6e-35
 Identities = 80/159 (50%), Positives = 105/159 (66%), Gaps = 5/159 (3%)
 Frame = +2

Query: 80  FATSSASHFWVLFPHCQFSSQSL---HFTKQQYTNTELPS--FDSSAYANVLQNCIKNRI 244
           FAT   ++  + F  C +++Q+       +    + ELP+  FDS AYA +LQ+CI+N  
Sbjct: 4   FATHCKTNARISFSRCGYAAQAAAAASLPQHPPVHAELPNSEFDSHAYAAMLQHCIRNGD 63

Query: 245 FTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQG 424
                 LHC ILK+GGCLDLF  NIL+N+YVK+ +L +A  LFDEMS RN +SFVTLIQG
Sbjct: 64  SNSAMVLHCGILKKGGCLDLFALNILINMYVKAGMLSNATTLFDEMSERNTISFVTLIQG 123

Query: 425 YLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           +    ++  +V LF RLH EGHELN F FTTILK+LV M
Sbjct: 124 FADSQRFFDSVELFRRLHTEGHELNQFVFTTILKLLVRM 162



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 36/112 (32%), Positives = 56/112 (50%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           YA+ LQ C        GK +HC ++K G   D+F  N L+ +Y K   L ++  LF E  
Sbjct: 354 YASTLQACATMERLDFGKQIHCHVIKVGLDSDVFVSNALMGVYAKCGKLENSMDLFVESP 413

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
            RN VS+ T+I GY+Q      A+ LF  + R   +     +++ L+   S+
Sbjct: 414 NRNDVSWNTMIVGYVQLGDGEKALALFSNMLRCQVQATEVTYSSALRASASL 465


>ref|XP_006483017.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like isoform X1 [Citrus
           sinensis] gi|568858974|ref|XP_006483018.1| PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like isoform X2 [Citrus
           sinensis]
          Length = 832

 Score =  147 bits (371), Expect = 2e-33
 Identities = 76/142 (53%), Positives = 93/142 (65%), Gaps = 6/142 (4%)
 Frame = +2

Query: 134 SSQSLHFTKQQYTNTELP------SFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGC 295
           S+Q+   T+Q   +T  P       F+S +YA  LQ+CI+N        +HC +LK+G C
Sbjct: 29  SAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC 88

Query: 296 LDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRL 475
           LDLF  N+LLN+YVK   L DA +LFDEM  RN +SFVT IQGY    ++  AVGLF  L
Sbjct: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148

Query: 476 HREGHELNPFAFTTILKVLVSM 541
           HREGHELNPFAFT  LKVLVSM
Sbjct: 149 HREGHELNPFAFTAFLKVLVSM 170



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/112 (31%), Positives = 58/112 (51%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           +A VL+ C+        K+ H   LK    +DL+    LL+LY KS  + +A ++F+EM 
Sbjct: 261 FAFVLKACLGLDTIRVAKSAHGCALKTRYEVDLYVAVALLDLYTKSGEISNARRIFEEMP 320

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
            ++V+ +  +I  Y Q D    AV LF R+ +     N F F ++L+   +M
Sbjct: 321 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 372


>ref|XP_006438846.1| hypothetical protein CICLE_v10033965mg [Citrus clementina]
           gi|557541042|gb|ESR52086.1| hypothetical protein
           CICLE_v10033965mg [Citrus clementina]
          Length = 832

 Score =  147 bits (370), Expect = 2e-33
 Identities = 76/142 (53%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
 Frame = +2

Query: 134 SSQSLHFTKQQYTNTELP------SFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGC 295
           S Q+   T+Q   +T  P       F+S +YA  LQ+CI+N        +HC +LK+G C
Sbjct: 29  SGQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC 88

Query: 296 LDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRL 475
           LDLF  N+LLN+YVK   L DA +LFDEM  RN +SFVT IQGY    ++  AVGLF  L
Sbjct: 89  LDLFATNVLLNVYVKLNQLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148

Query: 476 HREGHELNPFAFTTILKVLVSM 541
           HREGHELNPFAFT  LKVLVSM
Sbjct: 149 HREGHELNPFAFTAFLKVLVSM 170



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/112 (31%), Positives = 58/112 (51%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           +A VL+ C+        K+ H   LK    +DL+    LL+LY KS  + +A ++F+EM 
Sbjct: 261 FAFVLKACLGLDTIRVAKSAHGCALKTRYEVDLYVAVALLDLYTKSGEISNARRIFEEMP 320

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
            ++V+ +  +I  Y Q D    AV LF R+ +     N F F ++L+   +M
Sbjct: 321 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 372


>gb|AHB18406.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 775

 Score =  144 bits (364), Expect = 1e-32
 Identities = 73/112 (65%), Positives = 84/112 (75%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           Y  +LQ C++N        LHC ILKRG CLDLF  NILLN+YVK+ELL +A  LFD M 
Sbjct: 2   YGALLQRCLQNDDPISAMGLHCKILKRGNCLDLFATNILLNVYVKAELLSEAEILFDVMP 61

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
            RN VSFVTL+QGY Q  +++ AVGLF RLHREGHELNPF FT+ILKVLVSM
Sbjct: 62  ERNTVSFVTLVQGYAQCLQFSEAVGLFTRLHREGHELNPFVFTSILKVLVSM 113


>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  142 bits (359), Expect = 4e-32
 Identities = 75/148 (50%), Positives = 99/148 (66%)
 Frame = +2

Query: 98  SHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDI 277
           ++F + F    FS QS   T++   +     F+S AYAN LQ+CI+    + GK LHC+I
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 278 LKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAV 457
           LKRGGCLDLF  NILLN+YVKS+ L DA++LFDEM  RN +SFVTLIQGY +  ++  A+
Sbjct: 65  LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124

Query: 458 GLFVRLHREGHELNPFAFTTILKVLVSM 541
            LFVRLHRE    N F F ++L+   +M
Sbjct: 125 ELFVRLHREVLP-NQFTFASVLQACATM 151


>ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317392|gb|EFH47814.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 822

 Score =  140 bits (352), Expect = 2e-31
 Identities = 73/139 (52%), Positives = 92/139 (66%)
 Frame = +2

Query: 125 CQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCLDL 304
           C FS Q+   +  Q++++ +P  DS AY  +L+ CI+       KA+HCDILK+G CLDL
Sbjct: 26  CGFSVQTAE-SSVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDL 84

Query: 305 FGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHRE 484
           F  NILLN YVK+    DA  LFDEM  RN VS+VTL QGY  +D     VGL+ RLHRE
Sbjct: 85  FATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQD----PVGLYSRLHRE 140

Query: 485 GHELNPFAFTTILKVLVSM 541
           GHELNP  FT+ LK+ VS+
Sbjct: 141 GHELNPHVFTSFLKLFVSL 159



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/111 (29%), Positives = 59/111 (53%)
 Frame = +2

Query: 209 ANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMST 388
           +++L  C   +    G+ LH  ++K G  LD++  N L+++Y K E +  A +LF E+S+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSS 411

Query: 389 RNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           +NVVS+ T+I GY    +   A+ +F    R    +    F++ L    S+
Sbjct: 412 KNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASL 462


>ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g13230, mitochondrial; Flags: Precursor
           gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis
           thaliana] gi|332004486|gb|AED91869.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  134 bits (336), Expect = 2e-29
 Identities = 71/139 (51%), Positives = 90/139 (64%)
 Frame = +2

Query: 125 CQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCLDL 304
           C FS ++     +  +++ +P  DS AY  +L+ CI+       KA+HCDILK+G CLDL
Sbjct: 26  CGFSVKTAALDLES-SDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84

Query: 305 FGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHRE 484
           F  NILLN YVK+    DA  LFDEM  RN VSFVTL QGY  +D     +GL+ RLHRE
Sbjct: 85  FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHRE 140

Query: 485 GHELNPFAFTTILKVLVSM 541
           GHELNP  FT+ LK+ VS+
Sbjct: 141 GHELNPHVFTSFLKLFVSL 159


>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519143|gb|AET00767.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  133 bits (335), Expect = 2e-29
 Identities = 70/136 (51%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
 Frame = +2

Query: 137 SQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFT-PGKALHCDILKRGGCLDLFGK 313
           SQ LH  +  +    L + DS +YA++LQ  I+N      GK LHC ILKRG  LDLF +
Sbjct: 14  SQLLHQCRNIHHQQCLSALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQ 73

Query: 314 NILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHE 493
           NILLN YV+S  L DA++LFDEM   N +SFVTL QGY ++ ++  A+   +R+ +EGHE
Sbjct: 74  NILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHE 133

Query: 494 LNPFAFTTILKVLVSM 541
           +NPF FTT+LK+LVSM
Sbjct: 134 VNPFVFTTLLKLLVSM 149



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
 Frame = +2

Query: 71  WTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFT 250
           WTG     A +         F  +SL    Q       P+  +   +  L++C+    F 
Sbjct: 205 WTGMVACYAENC--------FYEESLQLFNQMRIMGYKPN--NFTISGALKSCLGLEAFN 254

Query: 251 PGKALHCDILKRGGCLD--LFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQG 424
            GK++H   LK  GC D  LF    LL LY KS  + DA +LF+EM   +++ +  +I  
Sbjct: 255 VGKSVHGCALK--GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIAR 312

Query: 425 YLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVS 538
           Y Q D+   A+ LF+R+ +     N F F ++L+   S
Sbjct: 313 YAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           +A+VLQ C  +     GK +H  +LK G   ++F  N ++++Y K   + ++ +LF+E+ 
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNP--FAFTTILKVLVSM 541
            RN V++ T+I GY+Q      A+ LF   H   H++ P    ++++L+   S+
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFT--HMLEHDMQPTEVTYSSVLRASASL 452


>ref|XP_003529187.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 822

 Score =  130 bits (326), Expect = 3e-28
 Identities = 67/125 (53%), Positives = 85/125 (68%)
 Frame = +2

Query: 167 YTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSE 346
           +T+      DS +YAN+LQ  I+NR    GK+LHC ILK G  LDLF +NILLN YV   
Sbjct: 35  FTHQAALDMDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFG 94

Query: 347 LLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILK 526
            L DA++LFDEM   N VSFVTL QG+ +  ++  A  L +RL REG+E+N F FTT+LK
Sbjct: 95  FLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLK 154

Query: 527 VLVSM 541
           +LVSM
Sbjct: 155 LLVSM 159


>ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cicer arietinum]
          Length = 813

 Score =  127 bits (318), Expect = 2e-27
 Identities = 65/121 (53%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +2

Query: 182 LPSFDSSAYANVLQNCIKNRIF-TPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHD 358
           L + DS +YA++LQ  I+N      GK LHC ILKRG  LDLF +NILLN YV+S  + D
Sbjct: 31  LVALDSHSYAHMLQQIIRNGADPNAGKQLHCHILKRGAFLDLFAQNILLNFYVQSNSMID 90

Query: 359 AAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVS 538
           A++LFDEM   N +SFVTL QGY + +++  A+   +RL +EGHE+NPF  TT+LK+LVS
Sbjct: 91  ASKLFDEMPLTNTISFVTLAQGYSRSNQFHHALHFILRLFKEGHEVNPFVLTTLLKLLVS 150

Query: 539 M 541
           M
Sbjct: 151 M 151



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 44/157 (28%), Positives = 72/157 (45%)
 Frame = +2

Query: 71  WTGFATSSASHFWVLFPHCQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFT 250
           WTG     A +         F  +SL    Q       P+  +   +  L++C+    F 
Sbjct: 207 WTGMGACYAEN--------GFYEESLQLFNQMRITGYRPN--NFTISGALKSCLGLEAFN 256

Query: 251 PGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYL 430
            GK++H   LK     DL+    LL LY KS  + DA +LF+EM   +++ +  +I  Y 
Sbjct: 257 VGKSVHGCALKASYDHDLYVGIALLELYAKSGEIVDAKRLFEEMPKNDLIPWSLMISRYA 316

Query: 431 QEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVSM 541
           Q D+   A+ LF+R+ +     N F F ++L+   S+
Sbjct: 317 QSDRSHEALELFLRMRQTPVVPNNFTFASVLQACASL 353



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/111 (28%), Positives = 60/111 (54%)
 Frame = +2

Query: 206 YANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKSELLHDAAQLFDEMS 385
           +A+VLQ C    +   GK +H  +LK G   ++F  N ++++Y K   + ++ +LF+E+ 
Sbjct: 343 FASVLQACASLVLLNVGKQIHSCVLKYGLNSNVFVSNAIIDVYAKCGEIENSMKLFEELP 402

Query: 386 TRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTILKVLVS 538
            RN V++ T+I GY+Q      A+ LF  +     E     ++++L+   S
Sbjct: 403 ERNDVTWNTIIVGYVQLGDGEKAMNLFSSMLGYDMEPTEVTYSSVLRACAS 453


>ref|XP_006290117.1| hypothetical protein CARUB_v10003764mg [Capsella rubella]
           gi|482558823|gb|EOA23015.1| hypothetical protein
           CARUB_v10003764mg [Capsella rubella]
          Length = 823

 Score =  124 bits (312), Expect = 1e-26
 Identities = 65/126 (51%), Positives = 83/126 (65%)
 Frame = +2

Query: 164 QYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCLDLFGKNILLNLYVKS 343
           +++++     DS AY ++L+ CI+       KA+HCDILK+G CLDLF  NILL+ YVK+
Sbjct: 39  EWSDSVATGLDSHAYGSMLRRCIQRNDPISAKAIHCDILKKGSCLDLFATNILLDAYVKA 98

Query: 344 ELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHREGHELNPFAFTTIL 523
               DA QLFDE+  RN VS+VTLIQGY  ED     VG + RL REGHELNP  FT+ L
Sbjct: 99  GFDTDALQLFDEIPERNNVSYVTLIQGYACED----PVGFYSRLQREGHELNPHVFTSFL 154

Query: 524 KVLVSM 541
           K  V +
Sbjct: 155 KWFVRL 160


>ref|XP_006399813.1| hypothetical protein EUTSA_v10012703mg [Eutrema salsugineum]
           gi|557100903|gb|ESQ41266.1| hypothetical protein
           EUTSA_v10012703mg [Eutrema salsugineum]
          Length = 822

 Score =  123 bits (309), Expect = 2e-26
 Identities = 66/138 (47%), Positives = 87/138 (63%)
 Frame = +2

Query: 125 CQFSSQSLHFTKQQYTNTELPSFDSSAYANVLQNCIKNRIFTPGKALHCDILKRGGCLDL 304
           C FS ++     + ++   + + DS  Y  +L+ CI+       KA+HCD++K+G CLDL
Sbjct: 25  CGFSVRTAELALE-WSAPMVQALDSHTYGTMLRRCIQLNDPISAKAIHCDVVKKGSCLDL 83

Query: 305 FGKNILLNLYVKSELLHDAAQLFDEMSTRNVVSFVTLIQGYLQEDKYTTAVGLFVRLHRE 484
           F  NILL+ YVK+   +DA +LFDEM  RN VS+VTL QG   ED     VGL+ RLHRE
Sbjct: 84  FASNILLDAYVKAGFANDALKLFDEMPERNNVSYVTLSQGNACED----PVGLYTRLHRE 139

Query: 485 GHELNPFAFTTILKVLVS 538
           GHELNP  FT+ LK  VS
Sbjct: 140 GHELNPHVFTSFLKWFVS 157