BLASTX nr result

ID: Atropa21_contig00042552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042552
         (617 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517493.1| multidrug resistance protein 1, 2, putative ...    44   9e-06

>ref|XP_002517493.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223543504|gb|EEF45035.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1259

 Score = 44.3 bits (103), Expect(2) = 9e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = -3

Query: 267 YKGPAGVERK-EDYAFIYFGAGHYAVVTYLIQ 175
           Y+ PA +ERK ++Y FIY GAG YAVV YLIQ
Sbjct: 724 YRNPASMERKTKEYVFIYIGAGLYAVVAYLIQ 755



 Score = 31.2 bits (69), Expect(2) = 9e-06
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -2

Query: 367 QLNLP*-PNSITGNITSVLSGFIRSIFAIVWNYLLQ 263
           +LN P  P SI G I SVLSGFI   FAIV + +++
Sbjct: 685 KLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMSNMIE 720


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