BLASTX nr result
ID: Atropa21_contig00042540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042540
(588 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 71 2e-15
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 68 6e-13
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 66 2e-12
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 61 2e-12
ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein A... 77 3e-12
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 68 3e-12
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 62 5e-12
ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein A... 74 4e-11
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 60 2e-10
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 59 4e-10
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 69 7e-10
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A... 69 7e-10
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 54 9e-10
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 54 1e-09
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 68 2e-09
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 54 2e-09
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 58 2e-09
ref|XP_004247265.1| PREDICTED: putative ribonuclease H protein A... 67 4e-09
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A... 62 8e-09
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 65 1e-08
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 70.9 bits (172), Expect(2) = 2e-15
Identities = 35/88 (39%), Positives = 47/88 (53%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
+V W KP T KLNTD S + G G++RDH + AF+LP +NN +EIK
Sbjct: 1081 LVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKA 1140
Query: 497 VLQGIVWCSDHNYTTLTLELDCFACCEY 580
L G+ WC H Y + LE+D C +
Sbjct: 1141 ALYGLEWCDQHGYKRVELEVDSQLLCNW 1168
Score = 37.4 bits (85), Expect(2) = 2e-15
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Frame = +3
Query: 120 EAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNM 260
+ N H LL + P ++ W K++SI+RV I V ++ F ++
Sbjct: 998 QVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKIVFPSI 1057
Query: 261 DWV*NWTKMCQMVEHFRERW 320
W +W K+ +VEH ++++
Sbjct: 1058 PWQSSWNKLINIVEHCKQQY 1077
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 68.2 bits (165), Expect(2) = 6e-13
Identities = 34/81 (41%), Positives = 44/81 (54%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
MV WIKP KLNTD S + N G++RDH I AFA P +NN +++K
Sbjct: 421 MVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSIIFAFASPFAFGTNNIAKLKA 480
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
L G+ WC H Y + LE+D
Sbjct: 481 ALYGLEWCEQHGYKDIVLEID 501
Score = 31.6 bits (70), Expect(2) = 6e-13
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 13/80 (16%)
Frame = +3
Query: 120 EAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNM 260
+ N H LL P I+ W K +SIYRV I ++ +SN+
Sbjct: 338 QTNNEVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSIYRVQYGIFKDTMQIIKLEYSNI 397
Query: 261 DWV*NWTKMCQMVEHFRERW 320
W +W + ++ ++++
Sbjct: 398 PWQYSWGHLINFIDQCQQQY 417
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 305 LQRKMVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNS 484
L+ MV W +P + KLNTD S G G++RDH I AFA+P+ +NN +
Sbjct: 205 LKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFA 264
Query: 485 EIKVVLQGIVWCSDHNYTTLTLELD 559
EI+ L G+ WC H + + LE+D
Sbjct: 265 EIQAALHGLQWCQQHGFEKIILEVD 289
Score = 32.0 bits (71), Expect(2) = 2e-12
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 13/75 (17%)
Frame = +3
Query: 129 NGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNMDWV 269
N H L+ + P I+ W K +SIYRV I + ++ + N+ W
Sbjct: 129 NEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQIIKAVYPNIPWQ 188
Query: 270 *NWTKMCQMVEHFRE 314
+W ++ +VE ++
Sbjct: 189 SSWERLFNLVEQCQQ 203
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 61.2 bits (147), Expect(2) = 2e-12
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
+V W KP T KLNTD S + G G +RD + AF++P +NN +EIK
Sbjct: 1153 LVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKA 1212
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
L G+ WC H Y + LE++
Sbjct: 1213 ALYGMEWCEQHGYKKVELEVN 1233
Score = 36.6 bits (83), Expect(2) = 2e-12
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Frame = +3
Query: 120 EAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNM 260
+ N H LL + P I+ W K +SI+RV I +V ++ F ++
Sbjct: 1070 QVNNEVHKLLIHILPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEVMQVIKLVFPSI 1129
Query: 261 DWV*NWTKMCQMVEHFRERW 320
W NW + ++EH +++
Sbjct: 1130 PWQSNWNNLVNIIEHCSQQY 1149
>ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 77.4 bits (189), Expect = 3e-12
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
MV W KP+ K+NTD S + N G G+VRDH + I AF+LP +NN +EIK
Sbjct: 1 MVSWRKPDDGIYKINTDGSALQESGNIGGGGIVRDHQGNLIYAFSLPFGLGTNNIAEIKA 60
Query: 497 VLQGIVWCSDHNYTTLTLELDCFACCEY 580
L G+ WC H Y ++ LE+D C++
Sbjct: 61 TLYGLDWCEQHGYKSIELEVDSELLCKW 88
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 67.8 bits (164), Expect(2) = 3e-12
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
+V W KP+ KLNTD S + G G++RD+ I AF+LP +NN +EIK
Sbjct: 1274 IVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKA 1333
Query: 497 VLQGIVWCSDHNYTTLTLELDCFACCEY 580
L G+ WC H Y + LE+D C +
Sbjct: 1334 ALHGLDWCEQHGYKKIELEVDSKLLCNW 1361
Score = 29.6 bits (65), Expect(2) = 3e-12
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 13/77 (16%)
Frame = +3
Query: 129 NGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNMDWV 269
N H LL + P + W K +SIYRV I + + F ++ W
Sbjct: 1194 NEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNIMQVITIVFPSIPWQ 1253
Query: 270 *NWTKMCQMVEHFRERW 320
+W + +VE ++ +
Sbjct: 1254 TSWNNLINIVEQCKQHY 1270
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 62.4 bits (150), Expect(2) = 5e-12
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +2
Query: 320 VLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKVV 499
V W KP K+NTD S + + GA G++RD IMAF+ P+ SNN +EI+
Sbjct: 289 VTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAA 348
Query: 500 LQGIVWCSDHNYTTLTLELD 559
L G+ W + + + LELD
Sbjct: 349 LFGLTWAFELGFKNILLELD 368
Score = 34.3 bits (77), Expect(2) = 5e-12
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 20/90 (22%)
Frame = +3
Query: 114 TYEAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFS 254
T + N H LL + +PI + W K T+I RV I L+ F
Sbjct: 203 TTKPNNAGHKLLLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFP 262
Query: 255 NMDWV*NWT-------KMCQMVEHFRERWF 323
+++W NWT K ++ ++ WF
Sbjct: 263 SINWPANWTTLILTSEKCVHNIKVYKVTWF 292
>ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 73.6 bits (179), Expect = 4e-11
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
MV WIKP+Q KLNTD S + G G++RDH I AF++P +NN +E+K
Sbjct: 1 MVRWIKPKQYIYKLNTDGSALADNGKIGGGGVLRDHQGKLIYAFSVPFGIGTNNFAELKA 60
Query: 497 VLQGIVWCSDHNYTTLTLELDCFACCEY 580
GI WC H Y + LE+D C++
Sbjct: 61 ATFGIEWCEQHGYKNIELEVDSEMICQW 88
>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 338
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +2
Query: 305 LQRKMVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNS 484
+Q MV W +P + K+NTD S + GA G++RD +MAFA P+ +NN +
Sbjct: 154 IQVSMVTWNRPSEQWIKINTDGSALTNPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTA 213
Query: 485 EIKVVLQGIVWCSDHNYTTLTLELD 559
E + VL G+ W + + + +ELD
Sbjct: 214 EAEAVLFGLSWALELGHRNIQIELD 238
Score = 31.2 bits (69), Expect(2) = 2e-10
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Frame = +3
Query: 114 TYEAKNGAHNLLHEVSPIIVLWK-------------ATSIYRVCQQILFQVNITLEQRFS 254
T +N H LL + +P+ ++W +T+I RV + L+ F
Sbjct: 73 TARPRNEGHQLLLQATPVFIVWNLWKNICACKYGGTSTNISRVKYAVYKDTFKMLKMAFP 132
Query: 255 NMDWV*NWTKMCQMVEH 305
+++W +W + Q E+
Sbjct: 133 HINWPGSWAALVQKAEN 149
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 58.9 bits (141), Expect(2) = 4e-10
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 320 VLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKVV 499
V W KP KLNTD S + + GA ++R+H I+A++ P+ +NN +E++
Sbjct: 1068 VQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAA 1127
Query: 500 LQGIVWCSDHNYTTLTLELD 559
+ GI WC Y + LE+D
Sbjct: 1128 IFGIAWCIHMKYNQVILEVD 1147
Score = 31.2 bits (69), Expect(2) = 4e-10
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 13/72 (18%)
Frame = +3
Query: 129 NGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNMDWV 269
N AH L+ +PI + W K ++I RV ++ L F + W
Sbjct: 987 NEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFPYISWP 1046
Query: 270 *NWTKMCQMVEH 305
W K C ++E+
Sbjct: 1047 LRWNKFCNVIEN 1058
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 69.3 bits (168), Expect = 7e-10
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = +2
Query: 320 VLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKVV 499
V+W KP KLNTD S + G G++RDHN I AFA+P +NN +E+K
Sbjct: 831 VMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAA 890
Query: 500 LQGIVWCSDHNYTTLTLELD 559
L G+ WC H Y + LE+D
Sbjct: 891 LYGLSWCEQHGYKRIILEVD 910
>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 927
Score = 69.3 bits (168), Expect = 7e-10
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
MV WIKP+Q+ KLNT+ S + G G++R H I AF++P+ + N +E+K
Sbjct: 754 MVRWIKPKQHVYKLNTNGSALAESGKIGGGGVLRHHQGKLICAFSVPLGVGTYNFAELKA 813
Query: 497 VLQGIVWCSDHNYTTLTLELDCFACCEY 580
GI WC H Y ++ LE+D C++
Sbjct: 814 ATFGIDWCEQHGYKSIELEVDSEIICQW 841
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 53.9 bits (128), Expect(2) = 9e-10
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +2
Query: 320 VLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKVV 499
V W +P + K+NTD S + GA G++RD ++AFA + SNN +E++
Sbjct: 137 VAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAA 196
Query: 500 LQGIVWCSDHNYTTLTLELD 559
G+ W D +Y + LE+D
Sbjct: 197 QFGLSWAIDLDYRNIILEVD 216
Score = 35.0 bits (79), Expect(2) = 9e-10
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 13/73 (17%)
Frame = +3
Query: 123 AKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFSNMD 263
A N H LL + +P V W KAT+I RV I L+ F ++
Sbjct: 54 ATNAGHQLLLQATPTFVCWNLWKNRCACKYGGKATNISRVKYAIYKDTFKMLQNTFPHIK 113
Query: 264 WV*NWTKMCQMVE 302
W NWT + Q E
Sbjct: 114 WPSNWTALYQTSE 126
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
M W +P + K+NTD S + + GA G++RD ++AFA P+ +NN +E +
Sbjct: 491 MTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEAEA 550
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
L G+ W + + + +ELD
Sbjct: 551 ALFGLSWALELGHRNILIELD 571
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Frame = +3
Query: 114 TYEAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFS 254
T +N +H LL + PI ++W K+T+I RV I L+ F
Sbjct: 406 TARLRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFP 465
Query: 255 NMDWV*NWTKMCQMVE 302
++W NW + Q E
Sbjct: 466 CINWPGNWAALIQTAE 481
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 68.2 bits (165), Expect = 2e-09
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
MV W KP++ KLNTD S + G G++RDH I AF++P+ +NN +E+K
Sbjct: 1450 MVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYAFSVPLDFGTNNMAELKA 1509
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
G+ WC H Y + LE+D
Sbjct: 1510 AAYGLEWCQQHGYKRIALEVD 1530
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
M W +P + K+NTD S + + GA G++RD ++AFA P+ +NN +E +
Sbjct: 220 MTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKMVLAFATPLGDGTNNKAEAEA 279
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
L G+ W + + + +ELD
Sbjct: 280 ALFGLSWALELGHRNILIELD 300
Score = 33.9 bits (76), Expect(2) = 2e-09
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Frame = +3
Query: 114 TYEAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFS 254
T +N +H LL + PI ++W K+T+I RV + L+ F
Sbjct: 135 TARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAVYKDTFKMLKIAFP 194
Query: 255 NMDWV*NWTKMCQMVE 302
++W NW + Q E
Sbjct: 195 RVNWPGNWAALIQTAE 210
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 57.8 bits (138), Expect(2) = 2e-09
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
MV W +P + K+NTD S + GA G++RD ++AFA P+ SNN +E
Sbjct: 128 MVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAETAA 187
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
L G+ W + Y + +ELD
Sbjct: 188 ALFGLSWALELGYRNILIELD 208
Score = 30.4 bits (67), Expect(2) = 2e-09
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 13/76 (17%)
Frame = +3
Query: 114 TYEAKNGAHNLLHEVSPIIVLW-------------KATSIYRVCQQILFQVNITLEQRFS 254
T +N H LL + +P + W KAT+I RV + L+ F
Sbjct: 43 TARPQNEGHQLLLQATPTFICWNLWKNRCACKYGAKATNISRVKYAVYKDTFKMLKIAFP 102
Query: 255 NMDWV*NWTKMCQMVE 302
++ W +WT + Q E
Sbjct: 103 HIKWPASWTALIQTSE 118
>ref|XP_004247265.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 193
Score = 66.6 bits (161), Expect = 4e-09
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +2
Query: 314 KMVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIK 493
K V W KP+Q KLNTD S + G G+VRD+ + I AF +P+ +NN +I+
Sbjct: 12 KEVTWEKPQQPFLKLNTDGSALNNPGRNGGGGIVRDYQGNMIYAFTIPLGIGTNNQEKIQ 71
Query: 494 VVLQGIVWCSDHNYTTLTLELD 559
V G+ WC H Y + LE+D
Sbjct: 72 AVSHGLDWCIQHRYRKIHLEVD 93
>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 213
Score = 62.4 bits (150), Expect(2) = 8e-09
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +2
Query: 320 VLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKVV 499
V W KP K+NTD S + + GA G++RD IMAF+ P+ SNN +EI+
Sbjct: 34 VAWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAA 93
Query: 500 LQGIVWCSDHNYTTLTLELD 559
L G+ W + + + LELD
Sbjct: 94 LFGLTWAFELGFKNILLELD 113
Score = 23.5 bits (49), Expect(2) = 8e-09
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
Frame = +3
Query: 237 LEQRFSNMDWV*NWTKMCQM-------VEHFRERWF 323
L+ F +++W NWT + Q +E ++ WF
Sbjct: 2 LKNAFPSINWPANWTALIQTSEKCVHNIEVYKVAWF 37
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/81 (39%), Positives = 44/81 (54%)
Frame = +2
Query: 317 MVLWIKPEQNT*KLNTDESNMGRQ*NAGAKGLVRDHNDH*IMAFALPIQALSNNNSEIKV 496
+V W KP T KLNTD S + G G++RD + AF++P +NN +EIK
Sbjct: 535 LVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKA 594
Query: 497 VLQGIVWCSDHNYTTLTLELD 559
L G+ WC H Y + LE+D
Sbjct: 595 ALYGMQWCEQHGYKKVELEVD 615