BLASTX nr result

ID: Atropa21_contig00042456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042456
         (609 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237605.1| PREDICTED: uncharacterized protein LOC101258...    80   6e-13
ref|XP_002331338.1| predicted protein [Populus trichocarpa]            40   9e-07
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...    40   1e-06
ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, part...    48   3e-06
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    40   4e-06

>ref|XP_004237605.1| PREDICTED: uncharacterized protein LOC101258945 [Solanum
           lycopersicum]
          Length = 221

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = -3

Query: 328 LK*SRDQFLRQKSKAMWLT---QNTNFFHAMLRSRRNTNIVFTIKDTQDQVQAEPARVIE 158
           LK +RDQFL+QK K  W+    QNT F+H  +++RRNTNI+F  KD   + Q     + +
Sbjct: 26  LKGARDQFLKQKEKIQWIQEGDQNTKFYHNYIKTRRNTNIIFGGKDKHGERQEGMEEISK 85

Query: 157 AFVEFYQNLLGSRTDGREHVC 95
           AF+E+Y  LLG    GR+HVC
Sbjct: 86  AFLEYYSELLGQSNKGRKHVC 106


>ref|XP_002331338.1| predicted protein [Populus trichocarpa]
          Length = 819

 Score = 39.7 bits (91), Expect(2) = 9e-07
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -1

Query: 609 RYYNMWSLASEHKEKVNEGWHTDRRGTKMYELVGKQNKLKGMLRRLNKENFNDVERR 439
           R+++MW    E    V + W  + RG  MY+L  K  KLK  L+  N  +F+++  R
Sbjct: 623 RFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDR 679



 Score = 39.3 bits (90), Expect(2) = 9e-07
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -3

Query: 319 SRDQFLRQKSKAMWLT---QNTNFFHAMLRSRRNTNIVFTIKDTQDQVQAEPARVIEAFV 149
           + + F +QK++  WL+   QNT++FH  +  R+N N + ++     +V      V    +
Sbjct: 720 AEESFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNKLLSLTREDGEVVERQEAVKSEVI 779

Query: 148 EFYQNLLG 125
            ++  +LG
Sbjct: 780 SYFHRVLG 787


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = -3

Query: 313 DQFLRQKSKAMWLTQ---NTNFFHAMLRSRRNTNIVFTIKDTQDQVQAEPARVIEAFVEF 143
           ++ L Q+SK  W+     N  FFHA L+SR+N   +  I      +      + +  + F
Sbjct: 287 EKMLMQRSKIDWIRAGDGNNAFFHAYLKSRQNAKRIKVIHKDDGTILTTQKEITQEVLAF 346

Query: 142 YQNLLGSRTDGREHV 98
           Y  L+G  +   +HV
Sbjct: 347 YGKLMGHDSRSLQHV 361



 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 28/91 (30%), Positives = 42/91 (46%)
 Frame = -1

Query: 609 RYYNMWSLASEHKEKVNEGWHTDRRGTKMYELVGKQNKLKGMLRRLNKENFNDVERRGEK 430
           R+ N W  A      V   W+   RGT M  L  K ++L+  L +LNK   ND+++    
Sbjct: 189 RFNNCWVDAVGFYSIVERSWNQPARGTPMQRLWYKLHRLRPHLLKLNKFT-NDIQKNKLV 247

Query: 429 EMQPLINYQEMLQANPTDDGLIGDERRLEQE 337
             + L   Q+ L+ N  D   I + +RL  E
Sbjct: 248 AREKLDQAQQDLRNNIMDAPRIEEVKRLTNE 278


>ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, partial [Populus
           trichocarpa] gi|550324501|gb|ERP53444.1| hypothetical
           protein POPTR_0014s18610g, partial [Populus trichocarpa]
          Length = 303

 Score = 48.1 bits (113), Expect(2) = 3e-06
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = -1

Query: 606 YYNMWSLASEHKEKVNEGWHTDRRGTKMYELVGKQNKLKGMLRRLNKENFNDVERRGEKE 427
           ++NMW+   +  + V+  W +   GT MY L  +   LKG L+ LN+ +FN +  R  + 
Sbjct: 159 FFNMWATHDQFLQVVSSCWSSPVYGTPMYILCRRLKLLKGPLKELNRLHFNHISERVSRL 218

Query: 426 MQPLINYQEMLQANPTDDGLIGDERRLEQECETLNKA 316
              L   Q   Q +  +  L   +R L  +  +L  A
Sbjct: 219 ESQLEQLQNAFQQDRDNQFLFAQDRFLRSKLSSLKFA 255



 Score = 28.9 bits (63), Expect(2) = 3e-06
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 331 NLK*SRDQFLRQKSKAMWLTQNTN---FFHAMLRSRRNTNIVFTI 206
           +LK +  QF  QK K  +L  + N   FFHA+L      N +  I
Sbjct: 251 SLKFAEKQFFSQKIKCNFLKHSDNGSKFFHALLGQNHQRNFILAI 295


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = -3

Query: 319 SRDQFLRQKSKAMWLT---QNTNFFHAMLRSRRNTNIVFTIKDTQDQVQAEPARVIEAFV 149
           + ++FL QKS+ +WL     NT FFH M+ +RR  N +  + D   +       +    V
Sbjct: 345 AEERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCV 404

Query: 148 EFYQNLLGS 122
           +F++ L GS
Sbjct: 405 DFFKELFGS 413



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = -1

Query: 579 EHKEKVNEGWHTDR---RGTKMYELVGKQNKLKGMLRRLNKENFNDVERRGEKEMQPLIN 409
           E  EK+   W  DR   +G+ M+ L  K   LKG +R  N+E+++ +E+R  +  Q L  
Sbjct: 258 EFIEKIRVTW--DRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKT 315

Query: 408 YQEMLQANPT 379
            Q  L A P+
Sbjct: 316 CQNNLLAAPS 325


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