BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042455
         (546 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...   124   2e-28
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...   105   2e-22
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...   102   1e-21
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A...   101   7e-20
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A...   101   1e-19
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A...   101   1e-19
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...   100   4e-19
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...   100   4e-19
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A...    97   3e-18
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588...    92   6e-18
emb|CAN64135.1| hypothetical protein VITISV_033516 [Vitis vinifera]    76   6e-12
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597...    75   8e-12
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]    75   1e-11
emb|CAN79574.1| hypothetical protein VITISV_017342 [Vitis vinifera]    75   1e-11
emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]    75   1e-11
emb|CAN75784.1| hypothetical protein VITISV_022492 [Vitis vinifera]    74   3e-11
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    73   5e-11
emb|CAN63734.1| hypothetical protein VITISV_037247 [Vitis vinifera]    73   5e-11
emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]    73   5e-11
emb|CAN68252.1| hypothetical protein VITISV_043921 [Vitis vinifera]    73   5e-11

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score =  124 bits (312), Expect(2) = 2e-28
 Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVG-NKRRWEAIPACIWWT 368
           LFLHCK TDQLWQ+F    K+KW  PGS  E+L CWN   GN G N++RW  +PACIWWT
Sbjct: 109 LFLHCKWTDQLWQMFIQKRKIKWTKPGSIIEVLQCWNR-DGNAGKNEKRWRIVPACIWWT 167

Query: 367 MWRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKR 266
           +W+ER  RCFE + N++QKIK +C  L+ F  K+
Sbjct: 168 IWKERNQRCFEGKQNNIQKIKTNCLGLYYFWCKQ 201



 Score = 26.9 bits (58), Expect(2) = 2e-28
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 284 YFWCKEVFVADTED 243
           YFWCK+V + D E+
Sbjct: 196 YFWCKQVVIGDAEN 209


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Solanum tuberosum]
          Length = 284

 Score =  105 bits (261), Expect(2) = 2e-22
 Identities = 41/93 (44%), Positives = 57/93 (61%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHC  T Q+W LF ++  + W MP  TS +L  W    G    KR W  IP+CIWW++
Sbjct: 176 LFLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGGTKSQKRWWRLIPSCIWWSV 235

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKR 266
           W+ER  RCF++R NS+ K+K +C    +F  K+
Sbjct: 236 WKERNSRCFDNRSNSIHKVKWNCIVSLLFWCKQ 268



 Score = 26.2 bits (56), Expect(2) = 2e-22
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 293 LSLYFWCKEVFVADTE 246
           +SL FWCK++ + DT+
Sbjct: 260 VSLLFWCKQLCIVDTD 275


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score =  102 bits (254), Expect(2) = 1e-21
 Identities = 40/93 (43%), Positives = 56/93 (60%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHC  T Q+W LF ++  + W MP  TS +L  W         KR W  IP+CIWW++
Sbjct: 409 LFLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSV 468

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKR 266
           W+ER  RCF++R NS+ K+K +C    +F  K+
Sbjct: 469 WKERNNRCFDNRSNSIHKVKWNCIVSLLFWCKQ 501



 Score = 26.2 bits (56), Expect(2) = 1e-21
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 293 LSLYFWCKEVFVADTE 246
           +SL FWCK++ + DT+
Sbjct: 493 VSLLFWCKQLCIVDTD 508


>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Solanum tuberosum]
          Length = 284

 Score =  101 bits (252), Expect(2) = 7e-20
 Identities = 40/93 (43%), Positives = 55/93 (59%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHC  T Q+W LF  +  + W MP  TS +L  W         KR W  IP+CIWW++
Sbjct: 176 LFLHCNYTAQIWNLFLNISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSV 235

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKR 266
           W+ER  RCF++R NS+ K+K +C    +F  K+
Sbjct: 236 WKERNSRCFDNRSNSIHKVKWNCIVSLLFLCKQ 268



 Score = 21.2 bits (43), Expect(2) = 7e-20
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 293 LSLYFWCKEVFVADTE 246
           +SL F CK++ + DT+
Sbjct: 260 VSLLFLCKQLCIVDTD 275


>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 399

 Score =  101 bits (252), Expect = 1e-19
 Identities = 42/89 (47%), Positives = 54/89 (60%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHCK T QLW++F +L+ + W MP   +E L  W        ++ RW  IPA IWW  
Sbjct: 291 LFLHCKFTQQLWRVFLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWAT 350

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIF 278
           W+ER  RCFE   NS+QK+KL+C  L  F
Sbjct: 351 WKERNSRCFESVENSMQKVKLNCILLLCF 379


>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 323

 Score =  101 bits (252), Expect = 1e-19
 Identities = 42/89 (47%), Positives = 54/89 (60%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHCK T QLW++F +L+ + W MP   +E L  W        ++ RW  IPA IWW  
Sbjct: 215 LFLHCKFTQQLWRVFLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWAT 274

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIF 278
           W+ER  RCFE   NS+QK+KL+C  L  F
Sbjct: 275 WKERNSRCFESVENSMQKVKLNCILLLCF 303


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 41/89 (46%), Positives = 54/89 (60%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHCK T QLW++F +L+ + W MP   +E L  W        ++ RW  IPA IWW +
Sbjct: 342 LFLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAI 401

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIF 278
           W+ER  RCFE   NS+Q +KL+C  L  F
Sbjct: 402 WKERNSRCFEGIENSVQDVKLNCILLLCF 430


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 41/89 (46%), Positives = 54/89 (60%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHCK T QLW++F +L+ + W MP   +E L  W        ++ RW  IPA IWW +
Sbjct: 448 LFLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAI 507

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIF 278
           W+ER  RCFE   NS+Q +KL+C  L  F
Sbjct: 508 WKERNSRCFEGIENSVQDVKLNCILLLCF 536


>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 397

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 38/89 (42%), Positives = 55/89 (61%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           LFLHCKV  +LW LF +   + W +PG T + L  WN       +K RW+ +PA IWWT+
Sbjct: 289 LFLHCKVVGKLWNLFTSFRGISWTVPGRTGQALESWNMEGSGSTDKSRWKIVPAVIWWTI 348

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIF 278
           W+ER  R F+++ + L KIK++C   F +
Sbjct: 349 WKERNSRNFDNKSSPLHKIKMNCIITFCY 377


>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
          Length = 255

 Score = 92.4 bits (228), Expect(2) = 6e-18
 Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRR-----WEAIPAC 380
           LFLHC+    LW +F  +  V WVMP +T ELL  W      VG +RR     W+ IPAC
Sbjct: 146 LFLHCRTAANLWNMFLCILGVNWVMPKTTLELLRQWEG----VGRRRRSKEDWWKCIPAC 201

Query: 379 IWWTMWRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKR 266
           IWWT+W+ER  R  + + NS QKIK++   L  F  K+
Sbjct: 202 IWWTLWKERNERSHDGKLNSTQKIKMNSLSLLYFWCKQ 239



 Score = 23.9 bits (50), Expect(2) = 6e-18
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 287 LYFWCKEVFVADTEDT*QF 231
           LYFWCK+  V + +    F
Sbjct: 233 LYFWCKQDLVGEVDSLVDF 251


>emb|CAN64135.1| hypothetical protein VITISV_033516 [Vitis vinifera]
          Length = 177

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 34/80 (42%), Positives = 44/80 (55%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC  T  LW++FF+L  V WV P S  E L  WN        K+ W   P CI+WT+
Sbjct: 90  LLLHCVKTRALWEVFFSLFGVLWVFPSSVKETLLSWNGFFVGKKRKKVWRVGPLCIFWTV 149

Query: 364 WRERKLRCFEDRYNSLQKIK 305
           W+ R    FED   S+Q++K
Sbjct: 150 WKVRNXIAFEDDVLSIQRLK 169


>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
          Length = 305

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC+V  +LW +FF L  + W  P +  +    W+    +   K+ W  IPACI+W++
Sbjct: 194 LLLHCEVASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDKAIKKIWIMIPACIFWSI 253

Query: 364 WRERKLRCFEDRYNSLQKIKLDCT 293
           W ER  RCF+    +L  +K  CT
Sbjct: 254 WLERNKRCFDGESTALGILKTRCT 277


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC  T  LW L F L  V WV+P S  E L  WN        K+ W A P  I+WT+
Sbjct: 238 LLLHCSRTRALWDLLFALFGVSWVLPFSVRETLLSWNGFFLGKNRKKAWRAAPLHIFWTV 297

Query: 364 WRERKLRCFEDRYNSLQKIK 305
           W+ER    F+D   S+Q++K
Sbjct: 298 WKERNRLAFKDESLSIQRLK 317


>emb|CAN79574.1| hypothetical protein VITISV_017342 [Vitis vinifera]
          Length = 1367

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 32/85 (37%), Positives = 48/85 (56%)
 Frame = -3

Query: 544  LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
            L LHC +T  LW L F+L  V+WV+ G+  E L  W+        K+ W+  P CI+W++
Sbjct: 1254 LLLHCVMTRALWNLLFSLFGVEWVLSGTVKETLLGWHGAFVGKIRKKAWQMXPLCIFWSV 1313

Query: 364  WRERKLRCFEDRYNSLQKIKLDCTC 290
            W+ER L  F +   S+Q++K    C
Sbjct: 1314 WKERNLLAFGNEVLSIQRLKHSFVC 1338


>emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]
          Length = 760

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC  T  LW L F L  V WV+P S  E L  WN        K+ W A P  I+WT+
Sbjct: 649 LLLHCSRTRALWDLLFALFGVSWVLPFSVRETLLSWNGFFLGKNRKKAWRAAPLHIFWTV 708

Query: 364 WRERKLRCFEDRYNSLQKIK 305
           W+ER    F+D   S+Q++K
Sbjct: 709 WKERNRLAFKDESLSIQRLK 728


>emb|CAN75784.1| hypothetical protein VITISV_022492 [Vitis vinifera]
          Length = 848

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC  T  LW L F L  V WV+P S  E L  WN        K+ W A P  I+WT+
Sbjct: 737 LLLHCSRTRALWDLLFALFGVSWVLPFSVRETLLSWNGYFLGKNRKKVWRAAPLHIFWTV 796

Query: 364 WRERKLRCFEDRYNSLQKIK 305
           W+ER    F+D   S+Q++K
Sbjct: 797 WKERNRLAFKDESLSIQRLK 816


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = -3

Query: 544  LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRR--WEAIPACIWW 371
            L LHC  T  LW+L F+L  V WVMP S  E L  W     +VG K R  W A P  I+W
Sbjct: 1737 LLLHCSKTRVLWELLFSLFGVSWVMPCSVRETLLSWQT--SSVGKKHRKVWRAAPLHIFW 1794

Query: 370  TMWRERKLRCFEDRYNSLQKIKLDCTC 290
            T+W+ R    F+D   S+Q++K    C
Sbjct: 1795 TVWKARNRLAFKDDVISIQRLKYSFLC 1821



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L +HC V   LW +  +L   +WV P +  E +  W         K+ W +IP  I+WT+
Sbjct: 588 LLIHCTVASVLWGMILSLFGAQWVFPETVKEAVISWKGSFVGKKRKKIWRSIPLFIFWTV 647

Query: 364 WRERKLRCFEDRYNSLQK 311
           W+ER    F     ++QK
Sbjct: 648 WKERNRLAFTGGELAIQK 665


>emb|CAN63734.1| hypothetical protein VITISV_037247 [Vitis vinifera]
          Length = 460

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/94 (35%), Positives = 50/94 (53%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC +T  LW L F+L  V+WV+ G+  E L  W+        K+ W+  P CI+W++
Sbjct: 58  LLLHCVMTRTLWNLLFSLFGVEWVLSGTVKETLLGWHGAFVGKIRKKAWQIAPLCIFWSV 117

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKRF 263
           W+ER    F +   S+Q++K    C     V+ F
Sbjct: 118 WKERNSLAFGNEVLSIQRLKHSFVCNLWSWVRMF 151


>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
          Length = 971

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/80 (41%), Positives = 43/80 (53%)
 Frame = -3

Query: 544  LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
            L LHC  T  LW+L F L  V WV+P S  E L  WN        K+ W   P  I+WT+
Sbjct: 860  LLLHCSRTRALWELLFALFGVSWVLPFSVRETLLSWNGYFLGKNRKKVWRVAPLHIFWTV 919

Query: 364  WRERKLRCFEDRYNSLQKIK 305
            W+ER    F+D   S+Q++K
Sbjct: 920  WKERNRLAFKDESLSIQRLK 939


>emb|CAN68252.1| hypothetical protein VITISV_043921 [Vitis vinifera]
          Length = 433

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/94 (35%), Positives = 50/94 (53%)
 Frame = -3

Query: 544 LFLHCKVTDQLWQLFFTLEKVKWVMPGSTSELLSCWNNLAGNVGNKRRWEAIPACIWWTM 365
           L LHC +T  LW L F+L  V+WV+ G+  E L  W+        K+ W+  P CI+W++
Sbjct: 274 LLLHCVMTRTLWNLLFSLFGVEWVLSGTVKETLLGWHGAFVGKIRKKAWQMAPLCIFWSV 333

Query: 364 WRERKLRCFEDRYNSLQKIKLDCTCLFIFGVKRF 263
           W+ER    F +   S+Q++K    C     V+ F
Sbjct: 334 WKERNSLAFGNEVLSIQRLKHSFVCNLWSWVRMF 367