BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042445
         (804 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   169   4e-42
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   143   3e-36
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...   143   8e-32
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...   120   7e-30
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...   132   1e-28
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   103   8e-24
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   102   1e-23
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    92   1e-20
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...    96   4e-20
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...    87   5e-20
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    97   5e-20
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    96   5e-20
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    87   3e-19
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    82   3e-17
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    88   6e-17
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...    82   1e-16
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    82   2e-16
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    79   6e-16
ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein A...    73   3e-15
gb|ABI34321.1| RNase H family protein [Solanum demissum]               88   4e-15

>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  169 bits (427), Expect(2) = 4e-42
 Identities = 72/210 (34%), Positives = 122/210 (58%)
 Frame = -2

Query: 635  WRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYCNAAVGIT 456
            WR+W+ KI   + L+R+ I   ++CYCC + + E++ HL +T  +A K+W+   +  GI 
Sbjct: 510  WRVWRRKIATYDNLKRMKIPVVSKCYCCKEGEMETMTHLLLTAPIAQKLWKQFASYAGII 569

Query: 455  TQFLRMRQAVQVWWNTECPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMAINKVIYEIN 276
               L ++Q +  WW+ +  +K   + + +  + MW++ K RN+  HG +   N + Y+  
Sbjct: 570  INGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTYNNMYYQCQ 629

Query: 275  VTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWFKCNSDGTSRG 96
            + +YQ+  ++F W + +  H PQ++ M + Y+P L  K+VRW  P   W  CN+DG S+G
Sbjct: 630  LILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKG 689

Query: 95   NAGPSSIAFCIRNEVGDLEYAAAKRISEVS 6
            N   SS  +CIR++ GDL YA A  I E +
Sbjct: 690  NPRMSSYGYCIRDKNGDLLYAEAHNIGETT 719



 Score = 30.0 bits (66), Expect(2) = 4e-42
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 789 EGWDNPWWMMTASGKFTVGSAWELLRRKSHKSNY 688
           EG D  WW    +G FTV SA+  +R +  +  +
Sbjct: 459 EGIDKAWWCGNLTGLFTVKSAYHRIRGRKEEEEW 492


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  143 bits (361), Expect(2) = 3e-36
 Identities = 69/213 (32%), Positives = 116/213 (54%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     WR+WK +I   + L+++ I   +RC+CCD ++ E++ HLF T  +  K+WRY 
Sbjct: 532  FKINFFMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEETMTHLFPTAPITYKLWRYF 591

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMAIN 297
                GI    + ++Q +  WW  E   K + +++ IP I MW + K RN + H   ++  
Sbjct: 592  AHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISWE 651

Query: 296  KVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWFKCN 117
            +++  +   + +M + +F W +++      I+Q    Y+ ++    V W+ P   + K N
Sbjct: 652  RMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSN 711

Query: 116  SDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRI 18
            +DG  RGN G SS  FCIR++ GDL YA AK I
Sbjct: 712  TDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGI 744



 Score = 35.8 bits (81), Expect(2) = 3e-36
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -1

Query: 786 GWDNPWWMMTASGKFTVGSAWELLRRK 706
           G D  WWM  A G FTV SAW++ R K
Sbjct: 489 GNDVVWWMANAQGIFTVKSAWQITRNK 515


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score =  143 bits (360), Expect = 8e-32
 Identities = 72/206 (34%), Positives = 112/206 (54%)
 Frame = -2

Query: 629 LWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYCNAAVGITTQ 450
           +WKFK+PV EV++ +GI   +RC+CC   + E++ HLF+T   A K+W       GI+ +
Sbjct: 1   MWKFKVPVDEVVQSMGINLVSRCWCCIQSKSETMSHLFLTFYTAAKLWILFANVAGISLE 60

Query: 449 FLRMRQAVQVWWNTECPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMAINKVIYEINVT 270
            L++ Q V  WW ++     K + RV+P + +W + K RN + HG   + N ++Y +N  
Sbjct: 61  GLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSD 120

Query: 269 IYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWFKCNSDGTSRGNA 90
           ++++ R  +   Q  P     I+   E ++P+L    V W+ P      CN+D  SR N 
Sbjct: 121 LWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTCNTDVASRCNP 179

Query: 89  GPSSIAFCIRNEVGDLEYAAAKRISE 12
             SS  FC+RN VGDL Y   K I E
Sbjct: 180 EISSYGFCLRNSVGDLVYVQGKEIQE 205


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score =  120 bits (301), Expect(2) = 7e-30
 Identities = 65/213 (30%), Positives = 104/213 (48%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     WRLWK +I   + L+R+ I+  +RC+CC + + E++ H+F+T  +A ++WR  
Sbjct: 909  FKMNFFLWRLWKRRIATDDNLKRMKIQIVSRCWCCSETEEETMTHIFLTAPIANRLWRQF 968

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMAIN 297
            +   GI  + + ++Q +  WW     +K K+V R +P I MW + K RN   H G    +
Sbjct: 969  SNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYS 1028

Query: 296  KVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWFKCN 117
            +V+ +                                         V+ E P  +  KCN
Sbjct: 1029 EVVMQ-----------------------------------------VQEEKPGRNKVKCN 1047

Query: 116  SDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRI 18
            +DG +RGN+G SS +F +R+E GDL YA AK I
Sbjct: 1048 TDGAARGNSGASSTSFVVRDEEGDLIYARAKGI 1080



 Score = 37.4 bits (85), Expect(2) = 7e-30
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHK 697
           D  WWM +  G FTV SAWEL+R K  +
Sbjct: 868 DVAWWMGSTQGIFTVKSAWELMRHKQER 895


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score =  132 bits (333), Expect = 1e-28
 Identities = 62/173 (35%), Positives = 99/173 (57%)
 Frame = -2

Query: 536 ESVDHLFVTGEVAIKVWRYCNAAVGITTQFLRMRQAVQVWWNTECPSKFKIVFRVIPIIT 357
           E+ +HLFV    A  +W     A GI   FL+++  +  WWN  C +K + +F  IP   
Sbjct: 3   ETWEHLFVACHKAQFLWNMVGRAAGIEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFI 62

Query: 356 MWQI*KWRNTVLHGGKMAINKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRP 177
           +W+  K RNTV HGGK++   ++ EI   I+ +  +R+ W ++IPK    +++ FE Y  
Sbjct: 63  LWESWKGRNTVKHGGKISRYNMLAEITRNIHNLAMVRYPWLRNIPKDWSMMVKFFENYIS 122

Query: 176 RLASKIVRWEFPMLDWFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRI 18
            LA+K++ W  P +  +KCN+D  S+GN  PS+  FCIRN  G+  Y  ++ +
Sbjct: 123 VLATKVIYWVPPNMGVYKCNTDCASKGNPRPSAGGFCIRNWNGEFIYTTSQEL 175


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  103 bits (257), Expect(2) = 8e-24
 Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 3/221 (1%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQ-YESVDHLFVTGEVAIKVWRY 480
            F+   L WR+ K KIP  E L   GIE  + CYCC DR   +S++H+F TG  A +VW+ 
Sbjct: 429  FKTSFLLWRILKGKIPTNEKLTNFGIE-PSPCYCCVDRAGMDSINHIFNTGNFAGRVWKS 487

Query: 479  CNAAVGITTQFLRMRQAVQVWWNTE-CPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMA 303
              A  G+      ++  ++ WW  + C +  +++ +  PI   W + K R    +GGK  
Sbjct: 488  FAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKAT 547

Query: 302  -INKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWF 126
             I++V Y +    ++M +  F   Q  P H   ++   E  +       V W  P  +W 
Sbjct: 548  NISRVKYVVYKDNFKMMKNAFPHIQ-WPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWI 606

Query: 125  KCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRISEVSK 3
            K N+DG++  N G       IRN+ G L  A A  + E +K
Sbjct: 607  KINTDGSALTNPGKIGAGGIIRNKEGKLVMAFATSLGEGTK 647



 Score = 33.9 bits (76), Expect(2) = 8e-24
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHKSNY 688
           D P W + + GKF+  SAWE +R K  K+ +
Sbjct: 388 DQPVWKLHSQGKFSCHSAWEEIRNKKAKNRF 418


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  102 bits (255), Expect(2) = 1e-23
 Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 3/220 (1%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQ-YESVDHLFVTGEVAIKVWRY 480
            F+   L WR+ K KIP  E L   GIE  + CYCC DR   +S++H+F TG  A +VW+ 
Sbjct: 429  FKTSFLLWRILKGKIPTNEKLTNFGIE-PSPCYCCVDRAGMDSINHIFNTGNFAGRVWKS 487

Query: 479  CNAAVGITTQFLRMRQAVQVWWNTE-CPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMA 303
              A  G+      ++  ++ WW  + C +  +++ +  PI   W + K R    +GGK  
Sbjct: 488  FAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKAT 547

Query: 302  -INKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWF 126
             I++V Y +    ++M +  F   Q  P H   ++   E  +       V W  P  +W 
Sbjct: 548  NISRVKYAVYKDNFKMMKNAFPHIQ-WPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWI 606

Query: 125  KCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRISEVS 6
            K N+DG++  N G       IRN+ G L  A A  + E S
Sbjct: 607  KINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGS 646



 Score = 33.9 bits (76), Expect(2) = 1e-23
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHKSNY 688
           D P W + + GKF+  SAWE +R K  K+ +
Sbjct: 388 DQPVWKLHSQGKFSCHSAWEEIRNKKAKNRF 418


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 92.0 bits (227), Expect(2) = 1e-20
 Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     WR  K K+P  E+L+R G    ++CYCC  +  + ++H+ + G  A  +W+  
Sbjct: 916  FKIAFFIWRALKGKLPTNELLQRFG-SAISKCYCCYSKGKDDINHILINGNFAKHIWKIH 974

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSK-FKIVFRVIPIITMWQI*KWRNTVLHGGK-MA 303
             A +G+      +R  +  W N +  ++  K++  ++P +  W + K R  V +G K  +
Sbjct: 975  AAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSS 1034

Query: 302  INKVIYEINVTIYQMCRLRF---SWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLD 132
            I++V Y I   + Q+ ++ F    WQ S  K    ++ + E  + +    +V W  P L 
Sbjct: 1035 IHRVQYGIFKDVMQVIKIVFPSIPWQSSWNK----LINIVEHCKQQYKIVLVSWNKPGLG 1090

Query: 131  WFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYA 33
             +K N+DG++  N+G       +R+  G + YA
Sbjct: 1091 TYKLNTDGSALQNSGKIGGGGILRDHQGKIVYA 1123



 Score = 34.7 bits (78), Expect(2) = 1e-20
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRK 706
           DN  W+ T +G FT+ SAWE +R K
Sbjct: 875 DNAIWIPTETGNFTIASAWECIRNK 899


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 375

 Score = 95.9 bits (237), Expect(2) = 4e-20
 Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
 Frame = -2

Query: 656 FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDR-QYESVDHLFVTGEVAIKVWRY 480
           F+   L WR+ K K+P  E L    IE  + C+CC DR + +S++H F +G  A KVWR 
Sbjct: 54  FKSSFLLWRVLKGKLPTNEKLSNFSIEPSS-CFCCVDRTRMDSIEHTFNSGSFATKVWRA 112

Query: 479 CNAAVGITTQFLRMRQAVQVWWNTE-CPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMA 303
                G+      ++  ++ WW      +  +++ + +PI  +W + K R    +GGK  
Sbjct: 113 FTTTAGLQEDQSSVQARLRQWWTARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKST 172

Query: 302 -INKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWF 126
            I++V Y +    ++M ++ F  + + P +   ++Q  E  +  +   +  W  P   W 
Sbjct: 173 NISRVKYAVYKDTFKMLKIAFP-RVNWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWI 231

Query: 125 KCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRISE 12
           K N+DG++  N G       IR++ G +  A A  + +
Sbjct: 232 KINTDGSALINTGHCGAGGIIRDKEGKMVLAFATPLGD 269



 Score = 29.3 bits (64), Expect(2) = 4e-20
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHKSNY 688
           D   W ++++G FT  +AWE +R K  K  +
Sbjct: 13  DQAIWKLSSNGCFTCSTAWEEVRNKKAKHKF 43


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score = 87.0 bits (214), Expect(3) = 5e-20
 Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 5/213 (2%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     WR  + K+P  + L++ G      CYCC+ +  + ++H+ +TG  A  +W+Y 
Sbjct: 610  FKISFFIWRALRGKLPTYDYLQKFG-SNATDCYCCNRKGIDDINHILITGNFANYIWKYY 668

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSK-FKIVFRVIPIITMWQI*KWRNTVLHGGKM-A 303
                GIT   + +R  +  W N    ++ +K++  ++P    W + K    V +G K+ +
Sbjct: 669  APTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCAVKYGNKISS 728

Query: 302  INKVIYEINVTIYQMCRLRF---SWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLD 132
            I +V Y I   + Q  ++ F    WQ S      +++ + E  + +L   +V W  P   
Sbjct: 729  IQRVQYGIFKDVMQTIKIVFPNIPWQHS----WYRLINLVEQCQQQLKVIMVSWRKPQFG 784

Query: 131  WFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYA 33
             +K N+DG++   +G       +R+  G L YA
Sbjct: 785  IYKLNTDGSALPESGKIGGGGILRDYTGKLHYA 817



 Score = 32.7 bits (73), Expect(3) = 5e-20
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRK 706
           D   W    +GKFT+ SAWE++R+K
Sbjct: 569 DTAIWTPEENGKFTIASAWEVIRKK 593



 Score = 25.0 bits (53), Expect(3) = 5e-20
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 721 VAKKKITQI*LLVKNVWITVLPFKISF 641
           + KKK T I  +  +VW   +PFKISF
Sbjct: 590 IRKKKSTDI--INNSVWHKHIPFKISF 614


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 96.7 bits (239), Expect(2) = 5e-20
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+   L WR  + K+P  E L   GIE  + C+CC     ++++H   +G+ A  VW+Y 
Sbjct: 902  FKCSFLLWRAIRGKLPTNEKLLSFGIEP-SDCHCCHSPGIDTIEHTLNSGDFAKNVWKYF 960

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSK-FKIVFRVIPIITMWQI*KWRNTVLHGGKMA- 303
              ++GI T FL +R  +  WW+    ++  K++    PI   W + K R  V +GGK + 
Sbjct: 961  AISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSN 1020

Query: 302  INKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWFK 123
            I +V + + +  +++    F +  S P    +   + E          V+W  P   W K
Sbjct: 1021 IARVKHLVILDNFKLLHTVFPY-ISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVK 1079

Query: 122  CNSDGTSRGNAGPSSIAFCIRNEVGDL 42
             N+DG++  N G       IRN +G++
Sbjct: 1080 LNTDGSALSNPGSIGAGDVIRNHLGEI 1106



 Score = 28.1 bits (61), Expect(2) = 5e-20
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 768 WMMTASGKFTVGSAWELLRRK 706
           W + +SG F+V SAW  +R K
Sbjct: 865 WKLNSSGLFSVSSAWNSIREK 885



 Score = 92.0 bits (227), Expect(2) = 9e-19
 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQ-YESVDHLFVTGEVAIKVWRY 480
            F+   L WR  + K+P  E L   G E  A C+CC +R   ++++H F  G+ A  +W+ 
Sbjct: 605  FKTSFLLWRTLRGKLPTNEKLISFGNEP-ANCFCCCNRSGLDTIEHTFNKGQFATYLWKS 663

Query: 479  CNAAVGITTQFLRMRQAVQVWWNTE-CPSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMA 303
              AA GI T    + Q +  WW+T+   + ++++ +  PI   W + K R    +GGK +
Sbjct: 664  FAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNRCASKYGGKQS 723

Query: 302  -INKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWF 126
             I++V Y I    Y++    F  Q   P +  +++Q+ E         +V+W  P   W 
Sbjct: 724  NISRVKYAIYKDNYKLMTTTFP-QIKWPSNWMELLQLGERCTHDTKVTMVKWIKPKKQWV 782

Query: 125  KCNSDGTSRGNAG 87
            K N+DG++  N G
Sbjct: 783  KINTDGSALCNPG 795



 Score = 28.5 bits (62), Expect(2) = 9e-19
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 768 WMMTASGKFTVGSAWELLRRKSHKS 694
           W + + G FT  SAW  +R K  K+
Sbjct: 568 WKLNSDGNFTYSSAWNAIREKRTKT 592


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score = 95.5 bits (236), Expect(2) = 5e-20
 Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 6/221 (2%)
 Frame = -2

Query: 656 FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQ-YESVDHLFVTGEVAIKVWRY 480
           F+   L WR+ K K+P  E L   GIE  + C+CC DR   +S++H F +G  A +VWR 
Sbjct: 325 FKSSFLLWRVLKGKLPTNEKLSNFGIEPSS-CFCCVDRTGMDSIEHTFNSGSFATRVWRA 383

Query: 479 CNAAVGITTQFLRMRQAVQVWWNTEC-PSKFKIVFRVIPIITMWQI*KWRNTVLHGGKMA 303
                G+      ++  ++ WW      +  +++ + +PI  +W + K R    +GGK  
Sbjct: 384 FTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKST 443

Query: 302 -INKVIYEINVTIYQMCRLRF---SWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPML 135
            I++V Y I    ++M +  F   +W    P +   ++Q  E  +  +   +  W  P  
Sbjct: 444 NISRVKYAIYKDTFKMLKSAFPCINW----PGNWAALIQTAERCKHEIKVCMTTWNRPPE 499

Query: 134 DWFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRISE 12
            W K N+DG++  N G       IR++ G +  A A  + +
Sbjct: 500 QWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGD 540



 Score = 29.3 bits (64), Expect(2) = 5e-20
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHKSNY 688
           D   W ++++G FT  +AWE +R K  K  +
Sbjct: 284 DQAIWKLSSNGCFTCSTAWEEVRNKKAKHKF 314


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 87.4 bits (215), Expect(3) = 3e-19
 Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     WR  + K+P  E L+RIG +  + CYCC ++  + ++H+ + G  A  +W+  
Sbjct: 1109 FKVSFFIWRALRGKLPTNENLQRIG-KNLSDCYCCYNKGKDDINHILINGNFAKYIWKIY 1167

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSK-FKIVFRVIPIITMWQI*KWRNTVLHGGK-MA 303
            ++AVG+      +R  +  W N +  ++  K++  ++P    W + K R  V +G K  +
Sbjct: 1168 SSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSS 1227

Query: 302  INKVIYEINVTIYQMCRLRF---SWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLD 132
            I +V Y I   I Q+  + F    WQ S    +  + Q  + Y+      IV+W  P L 
Sbjct: 1228 IYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCKQHYK----ILIVKWNKPDLG 1283

Query: 131  WFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYA 33
             +K N+DG++  N+G       +R+  G + YA
Sbjct: 1284 KYKLNTDGSALQNSGKIGGGGILRDNQGKIIYA 1316



 Score = 34.3 bits (77), Expect(3) = 3e-19
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 780  DNPWWMMTASGKFTVGSAWELLRRKSHK 697
            D   W  T SG+FT+ SAW+ +R+K +K
Sbjct: 1068 DTSIWTPTESGQFTISSAWDSIRKKRNK 1095



 Score = 20.4 bits (41), Expect(3) = 3e-19
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 676  VWITVLPFKISF 641
            +W   +PFK+SF
Sbjct: 1102 IWHKQIPFKVSF 1113


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 82.4 bits (202), Expect(2) = 3e-17
 Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
 Frame = -2

Query: 656 FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
           F+     WR  + K+P  E L + G E E  CYCC  +  + + H+ +TG  A  +W+  
Sbjct: 44  FKTSFFIWRALRSKLPTNENLLKFGKE-ELECYCCYRKGKDDLKHILITGNFAKYIWKIH 102

Query: 476 NAAVGITTQFLRMRQAVQVWWN-TECPSKFKIVFRVIPIITMWQI*KWRNTVLHGGK--- 309
              +GI      +R  +  W   T      K++  ++P I  W + K R +  +G K   
Sbjct: 103 TKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSS 162

Query: 308 -----MAINKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEF 144
                  I K I +I   +Y     + SW+        ++  + E  +  L   +V WE 
Sbjct: 163 IYRVESGIFKDIMQIIKAVYPNIPWQSSWE--------RLFNLVEQCQQHLKVTMVNWER 214

Query: 143 PMLDWFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAA 27
           P     K N+DG+++ N G       +R+  G L YA A
Sbjct: 215 PPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFA 253



 Score = 33.1 bits (74), Expect(2) = 3e-17
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRK 706
           D+ +WM    G+FT+ SAW+++R+K
Sbjct: 3   DSAYWMPDDKGQFTIFSAWDIIRKK 27


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 88.2 bits (217), Expect(2) = 6e-17
 Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
 Frame = -2

Query: 656 FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQ-YESVDHLFVTGEVAIKVWRY 480
           F+   L WR  K K+P  E L   GIE    C+CC DR   ++++H+F +G  A  VW +
Sbjct: 122 FKTSFLLWRTLKGKLPTNEKLSNFGIE-PLPCFCCFDRAGMDTIEHIFNSGPFATIVWNF 180

Query: 479 CNAAVGITTQFLRMRQAVQVWWNTECPSK--FKIVFRVIPIITMWQI*KWRNTVLHGGK- 309
             A  GI      +   ++ WW T+ P+    K++ +  PI   W + K R    +GGK 
Sbjct: 181 FAATAGIQADHSTLPALIKQWWTTK-PNNAGHKLLLQATPIFICWNLWKNRCACKYGGKG 239

Query: 308 MAINKVIYEINVTIYQMCRLRF---SWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPM 138
             I++V Y I    ++M +  F   +W    P +   ++   E     +    V W  P 
Sbjct: 240 TNISRVKYAIYKDTFKMLKNSFPSINW----PANWTTLILTSEKCVHNIKVYKVTWFKPP 295

Query: 137 LDWFKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAAKRISEVS 6
             W K N+DG++  N G       IR++ G +  A +  + E S
Sbjct: 296 DQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGS 339



 Score = 26.2 bits (56), Expect(2) = 6e-17
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHKS 694
           D   W +   G+F   SAW+ +R K  K+
Sbjct: 81  DQAIWKLNIHGRFDCKSAWDEIRNKKAKN 109


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 655

 Score = 81.6 bits (200), Expect(2) = 1e-16
 Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
 Frame = -2

Query: 656 FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
           F+     WR  K K+P  E L+RIG    + C CC  +  + ++H+ + G  A  +W+  
Sbjct: 370 FKIAFFIWRALKGKLPTNEFLQRIGSNI-SDCSCCYRKGKDDINHILINGNFAKYIWKIH 428

Query: 476 NAAVGITTQFLRMRQAVQVWWNTECPSK-FKIVFRVIPIITMWQI*KWRNTVLHGGKMA- 303
            A +GI      +R  +  W N +  ++  K++  ++P +  W + K R  V +G K + 
Sbjct: 429 AATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRSN 488

Query: 302 INKVIYEINVTIYQMCRLRFSWQQSIP--KHLPQIMQMFEGYRPRLASKIVRWEFPMLDW 129
           +++V Y I   + Q+ +L F    SIP   +   ++ + E    +    +V W  P    
Sbjct: 489 VHRVKYGIFKEVMQIIKLVF---PSIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGT 545

Query: 128 FKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYA 33
           +K N+DG++  N+G +     +R+  G + YA
Sbjct: 546 YKLNTDGSAIQNSGKTGGGGILRDFQGKIVYA 577



 Score = 32.0 bits (71), Expect(2) = 1e-16
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRK 706
           D   WM T +G F++ SAWE +R+K
Sbjct: 329 DTAIWMPTETGIFSISSAWECIRKK 353


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score = 82.0 bits (201), Expect(2) = 2e-16
 Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     W+  + K+P  + L   G++ E  CYCC  +  + + H+ +TG  A  +W+  
Sbjct: 665  FKVSFFIWKALRNKLPTNDSLMNFGMD-EQECYCCFRKGKDDILHILITGNFAKYIWKIH 723

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSKF-KIVFRVIPIITMWQI*KWRNTVLHGGKM-A 303
               +G+      +R  +  W N    ++  K++++++P    W + K R  V HG K  +
Sbjct: 724  ATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCS 783

Query: 302  INKVIYEINVTIYQMCRLRFSWQQSIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDWFK 123
              +V Y I     Q   + F    S   +L  ++ + E  + ++    V WE P L  FK
Sbjct: 784  TQRVQYAIFKDTMQAVMVAFP-NISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFK 842

Query: 122  CNSDGTSRGNAGPSSIAFCIRNEVGDLEYAAA 27
             N+DG++  N         +R+  G L YA A
Sbjct: 843  LNTDGSAIHNINKIGGGGILRDHNGKLIYAFA 874



 Score = 30.8 bits (68), Expect(2) = 2e-16
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 768 WMMTASGKFTVGSAWELLRRKS 703
           W +   GKFT+ SAW ++R+K+
Sbjct: 628 WTLEDKGKFTIHSAWNIIRKKN 649


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score = 78.6 bits (192), Expect(2) = 6e-16
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
 Frame = -2

Query: 656  FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
            F+     WR  K K+P  E L+RIG +      CC  +  + ++H+ + G  A  +W+  
Sbjct: 988  FKIAFFIWRALKGKLPTNEFLQRIGSDISDYS-CCYRKGKDDINHILINGNFAKYIWKIH 1046

Query: 476  NAAVGITTQFLRMRQAVQVWWNTECPSK-FKIVFRVIPIITMWQI*KWRNTVLHGGK-MA 303
             A +GI      +R  +  W N +  ++  K++  ++P I  W + K R  V +G K  +
Sbjct: 1047 AATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYGKKRSS 1106

Query: 302  INKVIYEINVTIYQMCRLRFSWQQSIP--KHLPQIMQMFEGYRPRLASKIVRWEFPMLDW 129
            I++V Y I   + Q+ +L F    SIP   +   ++ + E    +    +V W  P L  
Sbjct: 1107 IHRVKYGIFKEVMQVIKLVF---PSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGT 1163

Query: 128  FKCNSDGTSRGNAGPSSIAFCIRNEVGDLEYA 33
            +K N+DG++  N+G       +R+  G + YA
Sbjct: 1164 YKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYA 1195



 Score = 32.3 bits (72), Expect(2) = 6e-16
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 780  DNPWWMMTASGKFTVGSAWELLRRK 706
            D   WM T +G F++ SAWE +R+K
Sbjct: 947  DTATWMPTETGIFSIASAWECIRKK 971


>ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 421

 Score = 73.2 bits (178), Expect(3) = 3e-15
 Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
 Frame = -2

Query: 656 FQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWRYC 477
           F+   L WR  + K P  +     G+   A+C CC    ++++DH+FVTG  A  +W++ 
Sbjct: 140 FKVSFLLWRALRGKFPTNDKTTTFGV-APAKCSCCIKSGWDTIDHIFVTGHFANHIWQFH 198

Query: 476 NAAVGITTQFLRMRQAVQVWWNTECPSKF-KIVFRVIPIITMWQI*KWRNTVLHGGKMAI 300
           +A +G+    + ++  ++ WW  E  ++  ++++  +PII    + K R +  +GGK  +
Sbjct: 199 SAMLGVRQDKIPLKNLIKRWWTMEYKNEIQELLYHSMPIIISCNLWKNRCSAKYGGKHYV 258

Query: 299 NKVIYEINV 273
            +  +EI V
Sbjct: 259 QQCSHEIAV 267



 Score = 34.7 bits (78), Expect(3) = 3e-15
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 780 DNPWWMMTASGKFTVGSAWELLRRKSHK 697
           D P W +T +G+FT  SAWE +R K  K
Sbjct: 99  DQPIWKLTNNGRFTCASAWENIRTKRPK 126



 Score = 20.4 bits (41), Expect(3) = 3e-15
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 688 LVKNVWITVLPFKISF 641
           L   +W   +PFK+SF
Sbjct: 129 LYNYIWHRHIPFKVSF 144


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
 Frame = -2

Query: 662  FAFQDFILFWRLWKFKIPVGEVLRRIGIETEARCYCCDDRQYESVDHLFVTGEVAIKVWR 483
            F F+   L WRL + K+P  + + +     ++ C CC + + E+++H+F+  +VA  +W+
Sbjct: 575  FPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINHVFLNSDVASYLWK 634

Query: 482  YCNAAVGITTQFLRMRQAVQVWWNTECPSKF-KIVFRVIPIITMWQI*KWRNTVLHGGKM 306
                 +GI T+       ++ WWN +  +    ++   +PI+  W+I K R    +G + 
Sbjct: 635  KFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWKRRCACKYGDQK 694

Query: 305  AINKVIYEINVTIYQMCRLRFSWQQ-SIPKHLPQIMQMFEGYRPRLASKIVRWEFPMLDW 129
             +     E +V       LR ++    I      ++   E  RP    KIV W  P ++ 
Sbjct: 695  KMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINC 754

Query: 128  FKCNSDGT-SRGNAG 87
             K N+DG+ S GNAG
Sbjct: 755  VKINTDGSFSSGNAG 769