BLASTX nr result
ID: Atropa21_contig00042428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042428
(558 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004240204.1| PREDICTED: late blight resistance protein R1... 57 1e-11
ref|XP_006359793.1| PREDICTED: uncharacterized protein LOC102606... 56 1e-10
ref|XP_004240304.1| PREDICTED: putative late blight resistance p... 67 4e-09
ref|XP_004239803.1| PREDICTED: late blight resistance protein R1... 47 8e-09
ref|XP_004239804.1| PREDICTED: late blight resistance protein R1... 47 8e-09
ref|XP_006356911.1| PREDICTED: putative late blight resistance p... 58 2e-06
ref|XP_004240205.1| PREDICTED: putative late blight resistance p... 57 4e-06
>ref|XP_004240204.1| PREDICTED: late blight resistance protein R1-A-like [Solanum
lycopersicum]
Length = 1247
Score = 56.6 bits (135), Expect(2) = 1e-11
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Frame = -3
Query: 235 EADILSAFFHLYY--FVSEGFNAELSCISCEFHDLVQSL---SGDNMLVKLKDHAVSRLQ 71
E +SAF HLYY F++ N E+SCIS E HDLVQSL SG++MLV + H V RL
Sbjct: 53 ELTFVSAFCHLYYSLFLASS-NDEMSCISNEIHDLVQSLFHPSGEDMLVNIMYHDVPRLL 111
Query: 70 ENI 62
ENI
Sbjct: 112 ENI 114
Score = 38.5 bits (88), Expect(2) = 1e-11
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -1
Query: 381 GRGIKYEGETQKGEASNYSSVSSAVLRKNIVKFLNFIERLKKGRVQ 244
GRG + EG+T+ VSS VL ++IV L+FIERL GR+Q
Sbjct: 2 GRGKENEGQTK--------GVSSVVLCEDIVNLLDFIERLNNGRIQ 39
>ref|XP_006359793.1| PREDICTED: uncharacterized protein LOC102606248 [Solanum tuberosum]
Length = 302
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 40/81 (49%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = -3
Query: 235 EADILSAFFHLYY-FVSEGFNAELSCISCEFHDLVQS---LSGDNMLVKLKDHAVSRLQE 68
E +SAF HLYY F SEG N E+SCIS + HDLVQS L G++MLV + H L E
Sbjct: 59 ELTFVSAFCHLYYSFFSEGCNDEMSCISNDIHDLVQSLLHLHGEDMLVNMNYH---DLFE 115
Query: 67 NIKXXXXXXXXXXXSVTMTED 5
NIK VT TED
Sbjct: 116 NIK--SYISYAEPSRVTTTED 134
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -1
Query: 378 RGIKYEGETQKGEASNYSSVSSAVLRKNIVKFLNFIERLKKGRV 247
RG + EG+T KGE N S VSS VL ++ V ++FIERL G V
Sbjct: 3 RGKENEGQT-KGE-DNKSLVSSVVLHEDNVNLIDFIERLSNGCV 44
>ref|XP_004240304.1| PREDICTED: putative late blight resistance protein homolog
R1C-3-like [Solanum lycopersicum]
Length = 1320
Score = 66.6 bits (161), Expect = 4e-09
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = -3
Query: 223 LSAFFHLYYFVSEGFNAELSCISCEFHDLVQSL---SGDNMLVKLKDHAVSRLQENI-KX 56
L A L+Y++S+G NAE+SCIS E H+LVQSL +GD+M+VKL DH + RL ENI
Sbjct: 95 LLACLQLFYYMSDGQNAEMSCISYEVHELVQSLFDQTGDDMMVKLTDHVIPRLLENITSS 154
Query: 55 XXXXXXXXXXSVTMTED 5
S TMTED
Sbjct: 155 KIAEHHHSESSATMTED 171
>ref|XP_004239803.1| PREDICTED: late blight resistance protein R1-A-like isoform 1
[Solanum lycopersicum]
Length = 1235
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = -3
Query: 223 LSAFFHLYY-FVSEGFNAELSCISCEFHDLVQSL----SGDNMLVKLKDHAVSR 77
+S F HLYY F SE N E+ CIS E HD V SL SG++ML ++K H + +
Sbjct: 59 VSLFCHLYYSFFSESCNDEMCCISNEIHDFVHSLMLHPSGEDMLDRIKYHGLMK 112
Score = 38.9 bits (89), Expect(2) = 8e-09
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = -1
Query: 378 RGIKYEGETQKGEASNYSSVSSAVLRKNIVKFLNFIERLKKGRVQ 244
RG + EG+T++ + N S VSS VLR++IV ++F ERL RVQ
Sbjct: 3 RGKENEGQTKRED--NKSLVSSVVLREDIVNLVDFTERLNSWRVQ 45
>ref|XP_004239804.1| PREDICTED: late blight resistance protein R1-A-like isoform 2
[Solanum lycopersicum]
Length = 1228
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = -3
Query: 223 LSAFFHLYY-FVSEGFNAELSCISCEFHDLVQSL----SGDNMLVKLKDHAVSR 77
+S F HLYY F SE N E+ CIS E HD V SL SG++ML ++K H + +
Sbjct: 59 VSLFCHLYYSFFSESCNDEMCCISNEIHDFVHSLMLHPSGEDMLDRIKYHGLMK 112
Score = 38.9 bits (89), Expect(2) = 8e-09
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = -1
Query: 378 RGIKYEGETQKGEASNYSSVSSAVLRKNIVKFLNFIERLKKGRVQ 244
RG + EG+T++ + N S VSS VLR++IV ++F ERL RVQ
Sbjct: 3 RGKENEGQTKRED--NKSLVSSVVLREDIVNLVDFTERLNSWRVQ 45
>ref|XP_006356911.1| PREDICTED: putative late blight resistance protein homolog
R1B-12-like isoform X2 [Solanum tuberosum]
Length = 284
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Frame = -1
Query: 378 RGIKYEGETQKGEASNYSSVSSAVLRKNIVKFLNFIERLKKGRVQIA----------KKL 229
RG + EG+ +KG+A+N SSVSS VLRK++V L+FIERLK GR QIA +L
Sbjct: 3 RGKESEGQREKGKANN-SSVSSTVLRKDMVNLLDFIERLKNGRFQIALDIDQAETLTLEL 61
Query: 228 TFCPHFFIFIISSQKVLMPNCLAYHVSFMI 139
TF FF ++ M CL+Y V ++
Sbjct: 62 TFISAFFQLCYAALDDEM-ICLSYEVHNLV 90
>ref|XP_004240205.1| PREDICTED: putative late blight resistance protein homolog
R1C-3-like [Solanum lycopersicum]
Length = 1243
Score = 56.6 bits (135), Expect = 4e-06
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = -3
Query: 235 EADILSAFFHLYYFVSEGFNAELSCISCEFHDLVQSL----SGDNMLVKLKDHAVSRLQE 68
E L A L Y++S+ AE+SCIS E HDLVQSL SGD+M+VKL DH V L E
Sbjct: 48 ELKFLLACLQLCYYISD---AEMSCISYEVHDLVQSLFHQSSGDDMMVKLTDHVVPCLLE 104
Query: 67 NI 62
NI
Sbjct: 105 NI 106