BLASTX nr result

ID: Atropa21_contig00042393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042393
         (477 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362933.1| PREDICTED: uncharacterized protein DDB_G0271...   211   6e-53
ref|XP_004248504.1| PREDICTED: uncharacterized protein LOC101243...   206   3e-51
emb|CBI20378.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...    63   5e-08
ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus tri...    60   2e-07

>ref|XP_006362933.1| PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum
           tuberosum]
          Length = 473

 Score =  211 bits (538), Expect = 6e-53
 Identities = 116/165 (70%), Positives = 125/165 (75%), Gaps = 7/165 (4%)
 Frame = +2

Query: 2   VNVCRQXXXXXXXXXXXXXXXXXIP-------TERENKEKTPDSRNVTPTVEAKQANMSK 160
           VNVCRQ                 IP       TERE+KEKTPDSRNVT  VEAK AN SK
Sbjct: 271 VNVCRQSEGRKSSSSKSSVGSSSIPYKEREGETERESKEKTPDSRNVTTIVEAKLANKSK 330

Query: 161 VPVQARNRTSIPKMVTGRSVSLSVPNGSNKAKVHPSNVQRKALVPRRANERVSSILVSKP 340
           VPVQA NRTSIPKMVTGRSVS SVP  +N+ KVH +NVQRKALVP+RAN RV+SILVSKP
Sbjct: 331 VPVQAHNRTSIPKMVTGRSVSSSVPTETNRPKVHLTNVQRKALVPQRANGRVASILVSKP 390

Query: 341 SERIGSSQCKRVVSSGKENAVVRMGTSQKSIVKCNQGCSTKISSY 475
           SERIGSS C+RVVSSGKENAVV+MG SQKS+ K NQGCSTK SSY
Sbjct: 391 SERIGSSHCRRVVSSGKENAVVKMGMSQKSVAKDNQGCSTKFSSY 435


>ref|XP_004248504.1| PREDICTED: uncharacterized protein LOC101243644 [Solanum
           lycopersicum]
          Length = 463

 Score =  206 bits (524), Expect = 3e-51
 Identities = 113/164 (68%), Positives = 125/164 (76%), Gaps = 7/164 (4%)
 Frame = +2

Query: 2   VNVCRQXXXXXXXXXXXXXXXXXIP-------TERENKEKTPDSRNVTPTVEAKQANMSK 160
           VNVCRQ                 IP       TERE+KEKTP+SRNVT  VEAKQAN SK
Sbjct: 261 VNVCRQPEGRKSSSSKSSVGSSSIPYKEREGETERESKEKTPESRNVTTIVEAKQANKSK 320

Query: 161 VPVQARNRTSIPKMVTGRSVSLSVPNGSNKAKVHPSNVQRKALVPRRANERVSSILVSKP 340
           VPVQA NRTSIPKMVTGR+VS SV + +++ KVHP+NVQRKALVP+RAN RV+SILVSKP
Sbjct: 321 VPVQAHNRTSIPKMVTGRTVSSSVSSETSRPKVHPTNVQRKALVPQRANGRVASILVSKP 380

Query: 341 SERIGSSQCKRVVSSGKENAVVRMGTSQKSIVKCNQGCSTKISS 472
           SERIGSS C+RVVSSGKEN VVR G SQKS+VK NQGCSTK SS
Sbjct: 381 SERIGSSHCRRVVSSGKENDVVRKGISQKSVVKDNQGCSTKFSS 424


>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
 Frame = +2

Query: 77  TERENKEKTPDSRNVTPTVE-AKQANMSKVPVQARN-----RTSIPKMVTGRSVSLSVPN 238
           TE  N+++TPDSRNV  T + A     +    +A N     RT+  +    R V+ S   
Sbjct: 276 TEIRNRDRTPDSRNVMRTSQTAVNRGRASTTSKASNILVDYRTNNSRKEGKRIVAKSTTK 335

Query: 239 GSNKAKVHPSNVQRKALVPRRANERVSSILVSKPSERIGSSQCKRVVSSGKENAVVRMGT 418
            + K+KV    + RK LVP R NE+      +K   ++G     R+   GKENA  ++  
Sbjct: 336 DAVKSKVVCQTINRKGLVPLRVNEQDPLTAATKAKSKVGVGASNRLAGGGKENASGKLAV 395

Query: 419 SQKS 430
           SQKS
Sbjct: 396 SQKS 399


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
 Frame = +2

Query: 77  TERENKEKTPDSRNVTPTVE-AKQANMSKVPVQARN-----RTSIPKMVTGRSVSLSVPN 238
           TE  N+++TPDSRNV  T + A     +    +A N     RT+  +    R V+ S   
Sbjct: 266 TEIRNRDRTPDSRNVMRTSQTAVNRGRASTTSKASNILVDYRTNNSRKEGKRIVAKSTTK 325

Query: 239 GSNKAKVHPSNVQRKALVPRRANERVSSILVSKPSERIGSSQCKRVVSSGKENAVVRMGT 418
            + K+KV    + RK LVP R NE+      +K   ++G     R+   GKENA  ++  
Sbjct: 326 DAVKSKVVCQTINRKGLVPLRVNEQDPLTAATKAKSKVGVGASNRLAGGGKENASGKLAV 385

Query: 419 SQKS 430
           SQKS
Sbjct: 386 SQKS 389


>ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus trichocarpa]
          Length = 565

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
 Frame = +2

Query: 77  TERENKEKTPDSRNVTPTVEA-----KQANMSKVPVQARNRTSIPKMVTGRSVSLSVPNG 241
           T   NKE+TPDSRNV    EA     K +NMSK            +     +VS S P  
Sbjct: 276 TLMRNKEQTPDSRNVARMTEAARKKKKDSNMSKTSDVRVKEVFNSRKGAISNVSKSAPQE 335

Query: 242 SNKAKVHPSNVQRKALVPRRANERVSSILVSKPSERIGSSQCKRVVSSGKENAVVRMGTS 421
           + K+KV    ++  AL   R N++ S    +K  E++  S+  ++V+ GKEN + +M  S
Sbjct: 336 ALKSKVQKQTIRVTALAEHRGNKQHSLPGTAKSKEKVRVSRLNKMVAPGKENVMGKMSLS 395

Query: 422 Q 424
           Q
Sbjct: 396 Q 396


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