BLASTX nr result

ID: Atropa21_contig00042377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042377
         (642 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588...    61   9e-15
ref|XP_006341888.1| PREDICTED: uncharacterized protein LOC102596...    49   2e-08
ref|XP_006360609.1| PREDICTED: probable LRR receptor-like serine...    47   1e-06
emb|CAN77360.1| hypothetical protein VITISV_011015 [Vitis vinifera]    44   1e-06
emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]    49   1e-06
gb|AAT40556.2| hypothetical protein SDM1_4t00019 [Solanum demissum]    58   3e-06
emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]    47   3e-06
emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]    41   4e-06
emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]    44   5e-06
emb|CAN63289.1| hypothetical protein VITISV_025197 [Vitis vinifera]    40   5e-06
emb|CAN82017.1| hypothetical protein VITISV_003416 [Vitis vinifera]    41   6e-06
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    56   8e-06
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    56   8e-06

>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
          Length = 255

 Score = 60.8 bits (146), Expect(2) = 9e-15
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = +3

Query: 366 IYTVCLQAHIQINQVRNPQDWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKWR 545
           +Y + LQ    + QV +PQ WDL FRR+LNDWE+  +  +L  L++F G T   DT  W+
Sbjct: 5   LYILSLQQMDTVAQVWSPQGWDLIFRRALNDWEVDRVAGLLHTLNAFPGVTESPDTPIWK 64

Query: 546 LNNK 557
           ++ K
Sbjct: 65  MHKK 68



 Score = 45.4 bits (106), Expect(2) = 9e-15
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +2

Query: 542 EIKQQGTFSVKSVYWKLNHGASLNVVWPWNLIW 640
           ++ ++G FSVKS YW LN   ++ + WPW LIW
Sbjct: 64  KMHKKGIFSVKSCYWSLNSNQAMEMEWPWKLIW 96


>ref|XP_006341888.1| PREDICTED: uncharacterized protein LOC102596385 [Solanum tuberosum]
          Length = 730

 Score = 49.3 bits (116), Expect(2) = 2e-08
 Identities = 24/60 (40%), Positives = 31/60 (51%)
 Frame = +3

Query: 363 LIYTVCLQAHIQINQVRNPQDWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKW 542
           +IY +  Q    +  VR+ Q W+L+FRR LNDWEI SLT+    L          D L W
Sbjct: 418 VIYNLNQQKEATVADVRDNQGWNLSFRRMLNDWEIDSLTDFYNTLEQAINFQPNEDNLHW 477



 Score = 35.8 bits (81), Expect(2) = 2e-08
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 551 QQGTFSVKSVYWKLNHGASLNVVWPWNLIW 640
           + G F+VKS Y  L+  A++ + WPW +IW
Sbjct: 481 KNGKFTVKSAYRHLDRPAAMLLPWPWKMIW 510


>ref|XP_006360609.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g29180-like [Solanum tuberosum]
          Length = 458

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +3

Query: 366 IYTVCLQAHIQINQVRNPQDWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKWR 545
           ++ +C      +      Q WDL FRR LNDWE+  +  +L +LS     T  +D + W+
Sbjct: 35  LFQICGNPDANVGDCWTEQGWDLVFRRLLNDWEVERVAEILGMLSGVTINTNATDRMLWK 94

Query: 546 LN 551
            N
Sbjct: 95  HN 96



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 305 KTSFWEDHWIGQNRMRSNFSDLY 373
           KT FW+D WI Q+ +R  F DL+
Sbjct: 14  KTKFWKDVWIDQSPLRDLFPDLF 36


>emb|CAN77360.1| hypothetical protein VITISV_011015 [Vitis vinifera]
          Length = 1165

 Score = 44.3 bits (103), Expect(2) = 1e-06
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
 Frame = +2

Query: 26   VKWDSLTLSKKQGGLGIKV*GYLTRVC------RIDNCGD*HRG*GHRALWRGYIYQKYG 187
            V+W+ + L K++GGLG++    +          R  N  D         LWR  I  KYG
Sbjct: 775  VRWNLVCLEKRKGGLGVRNLSLMNNALLCKWNWRFANERD--------XLWRSVISLKYG 826

Query: 188  MMSQ-WITKEVKGHMAPVHGKLLEIS-DMISGLCGDH-NR*WKTSFWEDHWIGQNRMRSN 358
            +    W T++V G       K +     +  G    H     +  FW+D W G   +  +
Sbjct: 827  VEEXGWCTRDVMGRNGVGLWKAIRKKWGLFDGRVAFHLGNGQRVKFWKDKWCGDGPLCES 886

Query: 359  FSDLYCMSSS 388
            F  L+ MS S
Sbjct: 887  FPSLFSMSMS 896



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +3

Query: 366  IYTVCLQAHIQINQVRNPQD----WDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDT 533
            ++++ +  +  +++V NP      W   F R  NDWEI  +  +LQ + +F       D 
Sbjct: 890  LFSMSMSKNAWVSEVWNPVXDGIGWTPLFARXFNDWEIDLVERLLQKIQAFRVQREEEDR 949

Query: 534  LKWRL-NNKEPSLLSLY 581
            + W   NN   S+ SLY
Sbjct: 950  VIWTXSNNGXFSVRSLY 966


>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
          Length = 971

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
 Frame = +2

Query: 26  VKWDSLTLSKKQGGLGIKV*GYLTRVC------RIDNCGD*HRG*GHRALWRGYIYQKYG 187
           V+W+ + LSK +GGLG+K    L +        R  N           ALW   I  KYG
Sbjct: 600 VRWELVCLSKAKGGLGVKSLSLLNKTLLAKWNWRFAN--------EREALWNQVIRGKYG 651

Query: 188 -MMSQWITKEVK-----GHMAPVHGKLLEISDMISGLCGDHNR*WKTSFWEDHWIGQNRM 349
                W ++EV+     G    +      +SD ++ + G+  R    SFW D W G++ +
Sbjct: 652 EARGGWCSREVREAHGLGLWKGIRANWKLVSDRLAFIVGNGRR---VSFWRDRWCGESPL 708

Query: 350 RSNFSDLYCMS 382
              F  L+ ++
Sbjct: 709 CMTFPSLFALT 719



 Score = 29.3 bits (64), Expect(2) = 1e-06
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 426 WDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKWRLNNKEPSLL-SLYI 584
           W+  F R+ NDWEI      ++ + S        DT+ W        L+ SLYI
Sbjct: 741 WNPCFLRAFNDWEIEEAKRFMERIQSKRVYEDVEDTVSWTETKSGKFLVKSLYI 794


>gb|AAT40556.2| hypothetical protein SDM1_4t00019 [Solanum demissum]
          Length = 570

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 23/60 (38%), Positives = 37/60 (61%)
 Frame = +3

Query: 363 LIYTVCLQAHIQINQVRNPQDWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKW 542
           +++++C   + +I ++ +PQ W++ FRR LNDWEI  +   L L+  F GTT   D L W
Sbjct: 321 ILFSICTNTNSKIEEIWSPQGWNIIFRRLLNDWEIDGMVECLGLIGGFPGTTLEPDRLAW 380


>emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]
          Length = 760

 Score = 47.4 bits (111), Expect(2) = 3e-06
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
 Frame = +2

Query: 26  VKWDSLTLSKKQGGLGIKV*GYLTRVC------RIDNCGD*HRG*GHRALWRGYIYQKYG 187
           V+W+ + LSK +GGLG+K    L +        R  N           ALW   I  KYG
Sbjct: 389 VRWELVCLSKSKGGLGVKSLSLLNKTLLAKWNWRFAN--------EREALWNQVIRGKYG 440

Query: 188 -MMSQWITKEVK-----GHMAPVHGKLLEISDMISGLCGDHNR*WKTSFWEDHWIGQNRM 349
                W ++EV+     G    +      +SD ++ + G+  R    +FW D W G++ +
Sbjct: 441 EARGGWCSQEVREAHGMGLWKGIRADWKLVSDRLAIIVGNGRR---VNFWRDRWCGESPL 497

Query: 350 RSNFSDLYCMS 382
              F  L+ ++
Sbjct: 498 CMTFPSLFALT 508



 Score = 30.0 bits (66), Expect(2) = 3e-06
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 426 WDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKW-RLNNKEPSLLSLYI 584
           W+  F R+ NDWE+      ++ + S        DT+ W    + + S+ SLYI
Sbjct: 530 WNPCFLRAFNDWEVEEAERFMERIQSKRVIEDVEDTVSWTETKSGKFSVKSLYI 583


>emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]
          Length = 1168

 Score = 41.2 bits (95), Expect(2) = 4e-06
 Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
 Frame = +2

Query: 26   VKWDSLTLSKKQGGLGIKV*GYLTR----------VCRIDNCGD*HRG*GHRALWRGYIY 175
            VKWD +   K+ GGLG++    L R           C  DN            LW+  I 
Sbjct: 800  VKWDVVCTEKRNGGLGLRRIATLNRALLGKWIWRFACERDN------------LWKQVIS 847

Query: 176  QKYGMMSQ-WITKEVKGHM-APVHGKLLEISDM----ISGLCGDHNR*WKTSFWEDHWIG 337
             KYG     W  K+V G     V  ++++ SD     +S L G  +   K  FW+D W  
Sbjct: 848  TKYGQEDYGWRAKKVSGAAGVGVWKEIMKESDWCWENLSFLVGKGS---KIKFWKDRWCT 904

Query: 338  QNRMRSNFSDLYCMS 382
               +   F+ L+ ++
Sbjct: 905  DTPLSQCFNHLFVLA 919



 Score = 35.8 bits (81), Expect(2) = 4e-06
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 423  DWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDTLKWRLNNK 557
            DW+L F R  NDWE+  + ++L+ L     +    D++KWR   K
Sbjct: 938  DWNLIFERDFNDWELDMVGDLLRTLRGHRPSLE-DDSIKWRQGRK 981


>emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]
          Length = 779

 Score = 43.5 bits (101), Expect(2) = 5e-06
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
 Frame = +2

Query: 26  VKWDSLTLSKKQGGLGIKV*GYLTRVCRIDNCGD*HRG*GHR-ALWRGYIYQKYGMMSQ- 199
           V+W+ + L K++GGLG++    L+ +    +C    R    R  LWR  I  KYG+    
Sbjct: 346 VRWNLVCLEKRKGGLGVR---NLSLMNNALSCKWNWRFANERDTLWRSVISLKYGVEEGG 402

Query: 200 WITKEVKGHMAPVHGKLLEIS-DMISGLCGDH-NR*WKTSFWEDHWIGQNRMRSNFSDLY 373
           W T++V G       K +     +  G    H     +  FW+D W G   +  +F  L+
Sbjct: 403 WCTRDVLGRNGVGLWKAIRKKWGLFDGRVAFHLGNGQRVKFWKDKWCGDEPLCESFPSLF 462

Query: 374 CMSSS 388
            +S S
Sbjct: 463 SISMS 467



 Score = 33.1 bits (74), Expect(2) = 5e-06
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +3

Query: 366 IYTVCLQAHIQINQVRNPQ----DWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDT 533
           ++++ +  +  ++ V NP     DW   F R+ NDWEI  L  +LQ +  F       D 
Sbjct: 461 LFSISMSKNAWVSDVWNPVGDGIDWTPLFARAFNDWEIILLEXLLQKIQXFRVQREEEDR 520

Query: 534 LKW 542
           + W
Sbjct: 521 VIW 523


>emb|CAN63289.1| hypothetical protein VITISV_025197 [Vitis vinifera]
          Length = 410

 Score = 40.0 bits (92), Expect(2) = 5e-06
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
 Frame = +2

Query: 8   KKMLQSVKWDSLTLSKKQGGLGIKV*GYLTRVCRIDNCGD*HRG*GHRALWRGYIYQKYG 187
           K+ +  VKW+ ++  K++GGL I+   +L +       G          LW+  I  KYG
Sbjct: 165 KRKVHLVKWEVVSADKEKGGLSIRKLAFLNKAL----LGRWIFAFEKENLWKKVISVKYG 220

Query: 188 MMSQ-WITKEVKGHM-APVHGKLLEISDM----ISGLCGDHNR*WKTSFWEDHWIGQNRM 349
                W T +  G     V  ++L+ ++     I    G+     K  FW DHW G   +
Sbjct: 221 QEGLGWRTNKANGTFRVGVWKEILKETNWCWENIGFTVGNGT---KIRFWTDHWCGLAAL 277

Query: 350 RSNFSDLYCMS 382
             +F  LY ++
Sbjct: 278 SQSFPQLYALA 288



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
 Frame = +3

Query: 366 IYTVCLQAHIQINQVRNPQ----DWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDT 533
           +Y + +Q + ++++V +P      W+L+F R+ NDWE+  + ++L +L  +   T   D+
Sbjct: 284 LYALAVQRNARVDEVWDPNFGQGGWNLSFIRAFNDWELDLVGDLLTVLRGY-RLTLEEDS 342

Query: 534 LKWR 545
             W+
Sbjct: 343 XTWK 346


>emb|CAN82017.1| hypothetical protein VITISV_003416 [Vitis vinifera]
          Length = 469

 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
 Frame = +2

Query: 26  VKWDSLTLSKKQGGLGIKV*GYLTRVCRIDNCGD*HRG*GHR-ALWRGYIYQKYGMMSQ- 199
           V+W+ + L K++GGLG++    +        C    R    R ALWR  I  KY    + 
Sbjct: 245 VRWNLVCLEKRKGGLGVRNLALMNSALL---CKWNWRYANEREALWRCVISLKYDEEEEG 301

Query: 200 WITKEVK-----GHMAPVHGKLLEISDMISGLCGDHNR*WKTSFWEDHWIGQNRMRSNFS 364
           W T++V      G    +  K   ++  ++   G+  R     FW+D W G   +  +FS
Sbjct: 302 WHTRDVMRRNGVGLWKAIRKKWGLLNGRLAYHVGNGQR---VRFWKDKWCGDGPLCESFS 358

Query: 365 DLYCMSSS 388
            L+ MS S
Sbjct: 359 SLFSMSMS 366



 Score = 35.4 bits (80), Expect(2) = 6e-06
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
 Frame = +3

Query: 366 IYTVCLQAHIQINQVRNP----QDWDLNFRRSLNDWEIGSLTNMLQLLSSFCGTTTCSDT 533
           ++++ +  +  +++V NP      W   F R+ NDWEI  + ++LQ + +F       D 
Sbjct: 360 LFSMSMSKNAWVSEVWNPVGDGDGWTPLFARAFNDWEIDLVEHLLQKIHAFRVQREEEDR 419

Query: 534 LKWRLNNKEP-SLLSLY 581
           + W  +N    S+ SLY
Sbjct: 420 VIWTASNDGAFSIKSLY 436


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 15/220 (6%)
 Frame = +2

Query: 26  VKWDSLTLSKKQGGLGIK---V*G---YLTRVCRIDNCGD*HRG*GHRALWRGYIYQKYG 187
           VKW+++T  KK GGLGIK   + G    +  +C+  N         ++ LWR  I  KY 
Sbjct: 87  VKWNAVTTGKKNGGLGIKNMELHGKALLMKWLCKYSN--------ENQTLWRRVIGAKYE 138

Query: 188 MMSQWITKEVK-----GHMAPVHGKLLEISDMISGLCGDHNR*WKTSFWEDHWIGQNRMR 352
               W+TK V           +     E+        G+ N   K  FW+D W  +  + 
Sbjct: 139 NQDSWMTKIVTTPYGISLWRSIRALWEEVKPKFKMKVGNGN---KIKFWKDEWHEKGNLE 195

Query: 353 SNFSDLYCMSSSSYTNQPSPESPR-LGFKFQEIS**LGNWKLN*YASTLEFFLWNYNLL* 529
           + F D+Y ++           +P+   F F+       +W++   A  L+       L  
Sbjct: 196 TLFPDIYNLAMFQQRTIAELWTPQGWNFIFRREP---NDWEVMRLAEFLKLVGHFTGLQA 252

Query: 530 HT*M---EIKQQGTFSVKSVYWKLNHGASLNVVWPWNLIW 640
           +  M   +   +G F V S Y  ++  +  + +WPW  +W
Sbjct: 253 YEDMLWWKGNNRGEFKVHSAYRLMDESSQQSPIWPWKQVW 292


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 15/220 (6%)
 Frame = +2

Query: 26  VKWDSLTLSKKQGGLGIK---V*G---YLTRVCRIDNCGD*HRG*GHRALWRGYIYQKYG 187
           VKW+++T  KK GGLGIK   + G    +  +C+  N         ++ LWR  I  KY 
Sbjct: 193 VKWNAVTTGKKNGGLGIKNMELHGKALLMKWLCKYSN--------ENQTLWRRVIGAKYE 244

Query: 188 MMSQWITKEVK-----GHMAPVHGKLLEISDMISGLCGDHNR*WKTSFWEDHWIGQNRMR 352
               W+TK V           +     E+        G+ N   K  FW+D W  +  + 
Sbjct: 245 NQDSWMTKIVTTPYGISLWRSIRALWEEVKPKFKMKVGNGN---KIKFWKDEWHEKGNLE 301

Query: 353 SNFSDLYCMSSSSYTNQPSPESPR-LGFKFQEIS**LGNWKLN*YASTLEFFLWNYNLL* 529
           + F D+Y ++           +P+   F F+       +W++   A  L+       L  
Sbjct: 302 TLFPDIYNLAMFQQRTIAELWTPQGWNFIFRREP---NDWEVMRLAEFLKLVGHFTGLQA 358

Query: 530 HT*M---EIKQQGTFSVKSVYWKLNHGASLNVVWPWNLIW 640
           +  M   +   +G F V S Y  ++  +  + +WPW  +W
Sbjct: 359 YEDMLWWKGNNRGEFKVHSAYRLMDESSQQSPIWPWKQVW 398


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