BLASTX nr result
ID: Atropa21_contig00042328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042328
(602 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 75 7e-20
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 68 5e-17
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 71 9e-17
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 46 6e-09
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 52 8e-07
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244... 53 9e-07
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262... 53 1e-06
ref|XP_004253451.1| PREDICTED: putative ribonuclease H protein A... 56 7e-06
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 75.5 bits (184), Expect(2) = 7e-20
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +3
Query: 60 ECK*ISDMGE*DMIKL-TLLPEYIMQYIIRTIAPLREDNGMDRPSWLLDNKSDFTVKSAW 236
E K + G D KL + E + YI+ +I P E+ D W+ + FTVKSAW
Sbjct: 827 EVKYFTHQGAWDREKLLNKISEEMTDYIMESIKPPLEEYINDVAWWMGSTQGIFTVKSAW 886
Query: 237 YNMILRGQELDTYKNI*IKKMLFKISFFIWRC*KFKTPVDDMLKKMKYNTASRCWCCA 410
M + + Y+ I K + FK++FF+WR K + DD LK+MK SRCWCC+
Sbjct: 887 ELMRHKQERRTDYQLIWTKDVPFKMNFFLWRLWKRRIATDDNLKRMKIQIVSRCWCCS 944
Score = 47.8 bits (112), Expect(2) = 7e-20
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 413 SKEKITQHLLLKSYVANRVWYYFYSRAEID-EGTQLQ*LIVKWWKAPIIGRSKQIFKAVP 589
++E+ H+ L + +ANR+W F + A I E LQ LI+ WWK + K + +A+P
Sbjct: 946 TEEETMTHIFLTAPIANRLWRQFSNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMP 1005
Query: 590 TIIL 601
TII+
Sbjct: 1006 TIIM 1009
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 67.8 bits (164), Expect(2) = 5e-17
Identities = 36/91 (39%), Positives = 51/91 (56%)
Frame = +3
Query: 135 YIIRTIAPLREDNGMDRPSWLLDNKSDFTVKSAWYNMILRGQELDTYKNI*IKKMLFKIS 314
+I+ I+P G D W+ + + FTVKSAW + + + I K++ FKI+
Sbjct: 476 HIMENISPPNTLFGNDVVWWMANAQGIFTVKSAWQITRNKQEVRRDCEVIWNKELPFKIN 535
Query: 315 FFIWRC*KFKTPVDDMLKKMKYNTASRCWCC 407
FF+WR K + DD LKKM+ N SRCWCC
Sbjct: 536 FFMWRVWKRRIATDDNLKKMRINIVSRCWCC 566
Score = 45.8 bits (107), Expect(2) = 5e-17
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 416 KEKITQHLLLKSYVANRVWYYFYSRAEID-EGTQLQ*LIVKWWKAPIIGRSKQIFKAVPT 592
KE+ HL + + ++W YF A I+ +G LQ LI+ WWK + + I+KA+P
Sbjct: 570 KEETMTHLFPTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPA 629
Query: 593 IIL 601
II+
Sbjct: 630 IIM 632
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 70.9 bits (172), Expect(2) = 9e-17
Identities = 38/99 (38%), Positives = 58/99 (58%)
Frame = +3
Query: 111 LLPEYIMQYIIRTIAPLREDNGMDRPSWLLDNKSDFTVKSAWYNMILRGQELDTYKNI*I 290
LL E ++++II I P + G+D+ W + FTVKSA++ + R +E + + + I
Sbjct: 439 LLSEEMVEHIILNIRPKTSEEGIDKAWWCGNLTGLFTVKSAYHRIRGRKEEEEWRRYMWI 498
Query: 291 KKMLFKISFFIWRC*KFKTPVDDMLKKMKYNTASRCWCC 407
K M KISFF+WR + K D LK+MK S+C+CC
Sbjct: 499 KGMPIKISFFLWRVWRRKIATYDNLKRMKIPVVSKCYCC 537
Score = 42.0 bits (97), Expect(2) = 9e-17
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 434 HLLLKSYVANRVWYYFYSRAEID-EGTQLQ*LIVKWWKAPIIGRSKQIFKAVPTIIL 601
HLLL + +A ++W F S A I G LQ LI KWW + QI KAV +I+
Sbjct: 547 HLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIM 603
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 46.2 bits (108), Expect(2) = 6e-09
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 413 SKEKITQHLLLKSYVANRVWYYFYSRAEID-EGTQLQ*LIVKWWKAPIIGRSKQIFKAVP 589
SK + HL L Y A ++W F + A I EG QL +++KWW + K + + VP
Sbjct: 29 SKSETMSHLFLTFYTAAKLWILFANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVP 88
Query: 590 TIIL 601
T+++
Sbjct: 89 TVVI 92
Score = 40.0 bits (92), Expect(2) = 6e-09
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 336 KFKTPVDDMLKKMKYNTASRCWCC 407
KFK PVD++++ M N SRCWCC
Sbjct: 3 KFKVPVDEVVQSMGINLVSRCWCC 26
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 51.6 bits (122), Expect(2) = 8e-07
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Frame = +3
Query: 123 YIMQYIIRTIAP-------LREDNGMDRPSWLLDNKSDFTVKSAWYNMILRGQELDTYKN 281
Y+ Q++ T+ P N D W + FT+ SAW +I + + D N
Sbjct: 543 YVRQHVPPTMVPDIMQTQFKYNINIEDTAIWTPEENGKFTIASAW-EVIRKKKSTDIINN 601
Query: 282 -I*IKKMLFKISFFIWRC*KFKTPVDDMLKKMKYNTASRCWCC 407
+ K + FKISFFIWR + K P D L+K N A+ C+CC
Sbjct: 602 SVWHKHIPFKISFFIWRALRGKLPTYDYLQKFGSN-ATDCYCC 643
Score = 27.3 bits (59), Expect(2) = 8e-07
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 434 HLLLKSYVANRVWYYFYSRAEIDE-GTQLQ*LIVKWWKAPIIGRSKQIFKAVPTII 598
H+L+ AN +W Y+ I + L+ L+++W P S Q++K + +I+
Sbjct: 653 HILITGNFANYIWKYYAPTFGITQINIDLRSLLLQWTNLP---SSNQVYKLLISIL 705
>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
lycopersicum]
Length = 764
Score = 52.8 bits (125), Expect(2) = 9e-07
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +3
Query: 114 LPEYIMQYIIRTIAPLREDNGMDRPSWLLDNKSDFTVKSAWYNMILRGQELDTYKNI*I- 290
+P ++ +I++T +E + D WL + F++ SAW I+R ++ Y N I
Sbjct: 535 VPAILIPHILQTCINYKEGDE-DNAIWLPEESGKFSIASAWD--IIRRKKSTDYINTIIW 591
Query: 291 -KKMLFKISFFIWRC*KFKTPVDDMLKKMKYNTASRCWCC 407
K + FKISFFIWR + K P +D L ++ A C+CC
Sbjct: 592 HKYIPFKISFFIWRAIRGKLPTNDSL-QIFGKPAEECYCC 630
Score = 26.2 bits (56), Expect(2) = 9e-07
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 434 HLLLKSYVANRVW-YYFYSRAEIDEGTQLQ*LIVKWWKAPIIGR-SKQIFKAVPTII 598
H+L + AN +W YY I T ++ L ++W + K +F+ +P II
Sbjct: 640 HILSTGHFANYIWKYYARKLGVIHLQTNIRSLFIQWRNQHATNQVLKTLFQILPNII 696
>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
lycopersicum]
Length = 764
Score = 53.1 bits (126), Expect(2) = 1e-06
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +3
Query: 114 LPEYIMQYIIRTIAPLREDNGMDRPSWLLDNKSDFTVKSAWYNMILRGQELDTYKNI*I- 290
+P ++ +I++T +E D WL + F++ SAW I+R ++ Y N I
Sbjct: 535 VPAILIPHILQTCINYKE-GAEDTAIWLPEESGKFSIASAWD--IIRRKKSTDYINTIIW 591
Query: 291 -KKMLFKISFFIWRC*KFKTPVDDMLKKMKYNTASRCWCC 407
K + FKISFFIWR K K P +D L ++ A C+CC
Sbjct: 592 HKYIPFKISFFIWRAIKGKLPTNDNL-QIFGKPAEECYCC 630
Score = 25.0 bits (53), Expect(2) = 1e-06
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 434 HLLLKSYVANRVW-YYFYSRAEIDEGTQLQ*LIVKWWKAPIIGR-SKQIFKAVPTII 598
H+L + AN +W YY I T ++ L + W + K +F+ +P II
Sbjct: 640 HILSTGHFANYIWKYYARKLGVIHLQTNIRSLFILWRNQHATNQVLKTLFQILPNII 696
>ref|XP_004253451.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Solanum lycopersicum]
Length = 515
Score = 56.2 bits (134), Expect = 7e-06
Identities = 32/103 (31%), Positives = 53/103 (51%)
Frame = +3
Query: 99 IKLTLLPEYIMQYIIRTIAPLREDNGMDRPSWLLDNKSDFTVKSAWYNMILRGQELDTYK 278
++ + PE + I++TI +E D W+ + FT++SAW +I + + D
Sbjct: 272 VRQNVSPELVPN-ILQTIIHFQEGI-TDTAIWMPEEHGKFTIRSAW-EIIRKKRMADPVN 328
Query: 279 NI*IKKMLFKISFFIWRC*KFKTPVDDMLKKMKYNTASRCWCC 407
+ K +FK++FFIWR + K P ++ L K T CWCC
Sbjct: 329 KMIWHKQIFKVNFFIWRALRNKLPTNESLLKFG-RTEEECWCC 370