BLASTX nr result
ID: Atropa21_contig00042311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042311
(681 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 59 3e-12
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 50 5e-10
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 57 8e-10
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 54 1e-09
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 53 3e-09
emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera] 49 6e-09
ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266... 50 8e-09
gb|EOY05469.1| Uncharacterized protein TCM_020463 [Theobroma cacao] 49 8e-09
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 52 1e-08
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 54 1e-08
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana] 46 1e-07
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 47 1e-07
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 52 1e-07
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 52 1e-07
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 52 1e-07
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 54 2e-07
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 54 2e-07
gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon po... 54 2e-07
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 53 3e-07
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera] 48 3e-07
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 58.5 bits (140), Expect(2) = 3e-12
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYEKL PP+Y+ LK+FG CY++T R K RA + VFL YPLG +G
Sbjct: 749 SPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKG 801
Score = 39.3 bits (90), Expect(2) = 3e-12
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYKLL++ H+V R+VIF+E IFP+
Sbjct: 800 KGYKLLDIETHAVSISRHVIFHEDIFPF 827
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 50.4 bits (119), Expect(2) = 5e-10
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
+PYE+L P Y LK+FG CY +T R K RA + +FL YP+G +G
Sbjct: 764 TPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKG 816
Score = 40.0 bits (92), Expect(2) = 5e-10
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYKLL++ +SV R+VIFYE IFP+
Sbjct: 815 KGYKLLDIETYSVSISRHVIFYEDIFPF 842
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 56.6 bits (135), Expect(2) = 8e-10
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +3
Query: 6 PYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
PY+ L G P Y HLKSFG C+ +T RDKL RAI VFL YP ++G
Sbjct: 224 PYQVLFGSLPDYSHLKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKG 275
Score = 33.1 bits (74), Expect(2) = 8e-10
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+LNL V R V F+E IFP+
Sbjct: 274 KGYKVLNLQTSQVIVSRDVKFFESIFPF 301
>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
lycopersicum]
Length = 1125
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE L+ P+Y HLKSFG C+ T K +DK R I VF+ YP +G
Sbjct: 814 SPYETLYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNTKG 866
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+LNL+ V R V+F+E +FP+
Sbjct: 865 KGYKVLNLATKKVHISRDVVFHERMFPF 892
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 53.1 bits (126), Expect(2) = 3e-09
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE L+ P+Y HLKSFG C+ T K +DK R I +F+ YP +G
Sbjct: 807 SPYEILYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRTIPHIFVGYPFNTKG 859
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+LNL+ V R V+F+E +FP+
Sbjct: 858 KGYKVLNLATKKVHISRDVVFHERMFPF 885
>emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera]
Length = 659
Score = 48.5 bits (114), Expect(2) = 6e-09
Identities = 25/53 (47%), Positives = 30/53 (56%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
+P+E L+ SY HL FG CY +T R KL R I SVFL YP G +G
Sbjct: 210 TPFEILYNRVTSYSHLHIFGCLCYGSTLARHRTKLSPRTIPSVFLGYPPGYKG 262
Score = 38.1 bits (87), Expect(2) = 6e-09
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYKLLNLS ++++ R VIF+E FP+
Sbjct: 261 KGYKLLNLSTNAIYITRDVIFHETSFPF 288
>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
lycopersicum]
Length = 1537
Score = 50.4 bits (119), Expect(2) = 8e-09
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +3
Query: 6 PYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
PYE L+ P+Y L+ FG CY T PKV RDK + +FL Y G +G
Sbjct: 824 PYEVLYNKKPNYSQLRFFGCLCYPTIPKVLRDKFEPKTTPHIFLGYIFGTKG 875
Score = 35.8 bits (81), Expect(2) = 8e-09
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+++L+ + R VIF+EH+FP+
Sbjct: 874 KGYKVMSLATKKIHISRDVIFHEHVFPF 901
>gb|EOY05469.1| Uncharacterized protein TCM_020463 [Theobroma cacao]
Length = 513
Score = 49.3 bits (116), Expect(2) = 8e-09
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
+PYE L PPSYDH + FG C+ T + K RA +FL YP G +G
Sbjct: 322 TPYELLFKKPPSYDHFRVFGSLCFVFTLSQHKKKFDKRASKCIFLCYPNGVKG 374
Score = 37.0 bits (84), Expect(2) = 8e-09
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+ +L + VF R VIF+EH+FP+
Sbjct: 373 KGYKVYDLLANKVFISRNVIFHEHVFPF 400
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE L+ P Y HLK+FG C+ TT K ++K R + +F+ YP +G
Sbjct: 808 SPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKEKFEPRTVPHIFIGYPFNTKG 860
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+LNL+ + R V FYE I P+
Sbjct: 859 KGYKVLNLATKRIHVFRDVFFYETILPF 886
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE L+ P Y HLK+FG C+ TT K +DK R + +F+ YP +G
Sbjct: 465 SPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKDKFEPRTVPHIFIGYPFNTKG 517
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+LNL+ + R V FYE I P+
Sbjct: 516 KGYKVLNLATKRIHVSRDVSFYETILPF 543
>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
Length = 1309
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 30 PPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
PP+Y+ LK+FG CY+++ R K RA + VFL YPLG +G
Sbjct: 695 PPTYESLKTFGCLCYSSSSPKHRHKFEPRARACVFLGYPLGYKG 738
Score = 36.2 bits (82), Expect(2) = 1e-07
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYKLL++ H+V R+VIF+E IF +
Sbjct: 737 KGYKLLDIETHAVSISRHVIFHEDIFSF 764
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 33 PSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
P Y HL+ FG CY +T K R K RA ++VFL YP G +G
Sbjct: 571 PDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKG 613
Score = 35.8 bits (81), Expect(2) = 1e-07
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYKLL++ S+ R VIF+E IFP+
Sbjct: 612 KGYKLLDIETRSISISRNVIFHEEIFPF 639
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 52.0 bits (123), Expect(2) = 1e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE LHG P YD L+ FG CYA +DK R+ +F+ YP G++G
Sbjct: 717 SPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKG 769
Score = 30.0 bits (66), Expect(2) = 1e-07
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KG+K+ +LS + R V+F E++FPY
Sbjct: 768 KGWKVYDLSTNEFIVSRDVVFRENVFPY 795
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 52.0 bits (123), Expect(2) = 1e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE LHG P YD L+ FG CYA +DK R+ +F+ YP G++G
Sbjct: 717 SPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKG 769
Score = 30.0 bits (66), Expect(2) = 1e-07
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KG+K+ +LS + R V+F E++FPY
Sbjct: 768 KGWKVYDLSTNEFIVSRDVVFRENVFPY 795
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 52.0 bits (123), Expect(2) = 1e-07
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
SPYE L+ P Y HL++FG C+ TT K +DK R + +F+ YP +G
Sbjct: 643 SPYELLYQKKPFYSHLRNFGCLCFPTTLKTHKDKFEPRTMPHIFIGYPFNTKG 695
Score = 30.0 bits (66), Expect(2) = 1e-07
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
KGYK+LN + R V+FYE + P+
Sbjct: 694 KGYKVLNWDTKRIHVSRDVLFYETVLPF 721
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
+PY+ L G PP+YDHL+ FG CY T KL R+++ VF+ YP RG
Sbjct: 706 TPYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRG 758
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
+GY+ ++ + VF R+V F E +FP+
Sbjct: 757 RGYRCYDMVSRRVFTSRHVTFVEDVFPF 784
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
+PY+ L G PP+YDHL+ FG CY T KL R+++ VF+ YP RG
Sbjct: 706 TPYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRG 758
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
+GY+ ++ + VF R+V F E +FP+
Sbjct: 757 RGYRCYDMVSRRVFTSRHVTFVEDVFPF 784
>gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group]
Length = 1302
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
+PY+ L G PP+YDHL+ FG CY T KL R+++ VF+ YP RG
Sbjct: 608 TPYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRG 660
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
+GY+ ++ + VF R+V F E +FP+
Sbjct: 659 RGYRCYDMVSRRVFTSRHVTFVEDVFPF 686
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 53.1 bits (126), Expect(2) = 3e-07
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 6 PYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKRG 161
PY+ L G PP+YDHL+ FG CY T KL R+++ VF+ YP RG
Sbjct: 707 PYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRG 758
Score = 27.7 bits (60), Expect(2) = 3e-07
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
+GY+ ++ + VF R+V F E +FP+
Sbjct: 757 RGYRCYDMVSRRVFTSRHVTFVEDVFPF 784
>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
Length = 1323
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 3 SPYEKLHGHPPSYDHLKSFGYFCYATTPKVGRDKL*SRAISSVFLRYPLGKR 158
+P+E L+ PPSY HL+ FG YAT K RA+ S+F+ YP+G++
Sbjct: 573 TPFELLYSKPPSYSHLRVFGCLAYATNVHTSH-KFDYRAMPSIFIGYPVGQK 623
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 155 KGYKLLNLSNHSVFFLRYVIFYEHIFPY 238
K YKL +LS VF R V F+E IFPY
Sbjct: 623 KAYKLFDLSTKKVFTSRDVKFHEDIFPY 650