BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042300
         (575 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   220   2e-55
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   203   2e-50
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   203   2e-50
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   189   3e-46
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   170   2e-40
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   162   4e-38
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   161   1e-37
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   159   6e-37
ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264...   151   1e-34
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   150   3e-34
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                150   3e-34
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   147   2e-33
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...   147   2e-33
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  144   1e-32
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   143   3e-32
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   143   4e-32
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   142   6e-32
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             142   6e-32
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg...   142   8e-32
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              140   2e-31

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  220 bits (560), Expect = 2e-55
 Identities = 104/188 (55%), Positives = 132/188 (70%)
 Frame = +3

Query: 12   PLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTLKTL 191
            P +   WIM C+ TVSYS+L+NG PT+PFQ +KGLRQ DP+SP+LF L MEYL+R L+ L
Sbjct: 607  PSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEEL 666

Query: 192  KNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANLSKS 371
            K  PDFN+HPKCE+LN+  L FADDLL+FCR D+  +  M   F KFS A GL A+  KS
Sbjct: 667  KGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKS 726

Query: 372  SIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQSWT 551
            +IYF GV           + +  GELPFR LGVPL+SKK++  QC+PL++ +  R Q+W 
Sbjct: 727  NIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWM 786

Query: 552  AKSLSYAG 575
            AK LSYAG
Sbjct: 787  AKLLSYAG 794


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  203 bits (517), Expect = 2e-50
 Identities = 103/191 (53%), Positives = 130/191 (68%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           L  P     W+M C+ TV+Y+I++NG+ T+ F   KGLRQ DP+SP+LF + MEYL+R L
Sbjct: 412 LGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSRLL 471

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
           K LK    F YHPK  KL++  L FADDLLLF RGD   ++ + + FT+FSQA GL ANL
Sbjct: 472 KGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANL 531

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
           +KSSIY GGV           LG +  ELPF+ LGVPLSSKK++  Q  PLI+KV+ R+ 
Sbjct: 532 NKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARIN 591

Query: 543 SWTAKSLSYAG 575
           SWTAK LSYAG
Sbjct: 592 SWTAKKLSYAG 602


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  203 bits (517), Expect = 2e-50
 Identities = 99/191 (51%), Positives = 126/191 (65%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            L  P     WIM+C+ TVSYSIL+NG P+ PF  +KGLRQ DPLSP+LF L MEYL+R +
Sbjct: 607  LGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCM 666

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
              +   P+FN+HPKCE++ L  L FADDLL+F R D   +  +   F  FS+A GL A++
Sbjct: 667  GNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASI 726

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
             KS IYFGGV           + +  G LPFR LGVPL+SKK++ +QC+PLIDK+  R Q
Sbjct: 727  EKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQ 786

Query: 543  SWTAKSLSYAG 575
             W A  LSYAG
Sbjct: 787  GWVAHLLSYAG 797


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  189 bits (481), Expect = 3e-46
 Identities = 93/191 (48%), Positives = 124/191 (64%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            L  P +   WIM  + +V+Y   ING+ TR  + ++G+RQ DP+SP LF+L+MEYL R L
Sbjct: 432  LGFPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRIL 491

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
              L   P+FNYH KCEK+ +  L FADDLLLF RGD G VQ+M + F  F +++GL  N 
Sbjct: 492  SQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNP 551

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            SK +IY G V            G  +G++PFR LG+PLSSKK++I   Q LIDK++GR+ 
Sbjct: 552  SKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRIT 611

Query: 543  SWTAKSLSYAG 575
             W+A  LSYAG
Sbjct: 612  HWSAGLLSYAG 622


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  170 bits (431), Expect = 2e-40
 Identities = 84/180 (46%), Positives = 114/180 (63%)
 Frame = +3

Query: 36  MSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTLKTLKNFPDFNY 215
           M  + TVSY   +NG  T     ++GLRQ DP+SP LFV++ME L R L  ++   DFNY
Sbjct: 1   MIAVSTVSYRFNVNGYKTEIMGARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNY 60

Query: 216 HPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANLSKSSIYFGGVX 395
           HPKC+KL +  L FADDLLLF RGD+  V +M   +  FS+A GL+ N  K S+   G+ 
Sbjct: 61  HPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGID 120

Query: 396 XXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQSWTAKSLSYAG 575
                      G  +G+LPF+ LGVP++SKK+S     PLIDK++G+++ WTA+ LSYAG
Sbjct: 121 AVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAG 180


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  162 bits (411), Expect = 4e-38
 Identities = 74/189 (39%), Positives = 118/189 (62%)
 Frame = +3

Query: 9   IPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTLKT 188
           +P K   W+M  + TV+Y   ING+ +   + K G+ Q DP+SP LFVL+MEY  R +  
Sbjct: 95  LPKKFIGWVMKVITTVNYRFNINGELSNVLETKIGIWQGDPISPLLFVLMMEYFNRIMVK 154

Query: 189 LKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANLSK 368
           ++  P FN+H +CE+L +  L FADD+ L CRGD+  ++++ + F+ FS++ GL  N +K
Sbjct: 155 MQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTGLQINPAK 214

Query: 369 SSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQSW 548
             ++ GG+            G  +G LP R LGVPLS KK+++    PL++K++G+++ W
Sbjct: 215 CKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHW 274

Query: 549 TAKSLSYAG 575
           ++K LS AG
Sbjct: 275 SSKLLSIAG 283


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  161 bits (407), Expect = 1e-37
 Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6    NIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTLK 185
            NIP  L  WI SC+ +  +S+ +NG+    F  ++GLRQ DPLSPYLFV+ ME L+  ++
Sbjct: 441  NIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQ 500

Query: 186  TLKNF-PDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
               N  P F YH +C++LNL  L FADDLL+FC GD   V+ +++ F+ F     L AN+
Sbjct: 501  RRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANV 560

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            S+S I+  GV              S G  P R LG+PL + K+ +  C PL+D++  R++
Sbjct: 561  SESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIK 620

Query: 543  SWTAKSLSYAG 575
            SW  K LS+AG
Sbjct: 621  SWENKVLSFAG 631


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  159 bits (401), Expect = 6e-37
 Identities = 80/165 (48%), Positives = 104/165 (63%)
 Frame = +3

Query: 81  KPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTLKTLKNFPDFNYHPKCEKLNLVQLGFA 260
           K  RP   K+G+RQ DP+SP LFV++MEYL R L  L+   +FN+H KCEKL +  L FA
Sbjct: 458 KEYRPIAAKRGIRQGDPISPLLFVVMMEYLNRLLVKLQLDLNFNHHAKCEKLGITHLTFA 517

Query: 261 DDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANLSKSSIYFGGVXXXXXXXXXXXLGISK 440
           DD+LLFCRGD   V++M     KFS   GL+ N +K  IYFGGV               +
Sbjct: 518 DDVLLFCRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEE 577

Query: 441 GELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQSWTAKSLSYAG 575
           G+LP R LGVPL+SKK++I    PLIDK+  R++ WT+K L+  G
Sbjct: 578 GQLPVRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTG 622


>ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264629 [Solanum
           lycopersicum]
          Length = 261

 Score =  151 bits (381), Expect = 1e-34
 Identities = 76/157 (48%), Positives = 100/157 (63%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           + +P     W+  C+  V+YSI+ NG+ ++ F   KGLRQ DP+SP+LF + M+YL+R L
Sbjct: 102 VRLPEMFVQWLTKCVKIVNYSIVFNGQTSQSFDAAKGLRQGDPMSPFLFAIAMKYLSRLL 161

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
           K LK    F YHP+C KL++  L FADDLL+F RGD   V+ +   F++FSQA  L ANL
Sbjct: 162 KGLKEDKQFRYHPRCSKLDITHLCFADDLLMFARGDLKSVKAIQLCFSQFSQASRLQANL 221

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVP 473
           SKSSIY GGV           LG +  ELPF+ LGVP
Sbjct: 222 SKSSIYCGGVQQEVKNQIVQQLGYNMEELPFKYLGVP 258


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  150 bits (378), Expect = 3e-34
 Identities = 74/191 (38%), Positives = 111/191 (58%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            L  P +   WI  C+ T S+S+ +NG+    FQ  +GLRQ   LSPYLFV+ M+ L++ L
Sbjct: 619  LGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKML 678

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                    F YHPKC+ + L  L FADDL++   G    ++ + + F +F++  GL  +L
Sbjct: 679  DKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISL 738

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
             KS++Y  G+              S G+LP R LG+PL +K++S T C PL+++V  R+ 
Sbjct: 739  EKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIG 798

Query: 543  SWTAKSLSYAG 575
            SWT++ LSYAG
Sbjct: 799  SWTSRFLSYAG 809


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  150 bits (378), Expect = 3e-34
 Identities = 76/191 (39%), Positives = 110/191 (57%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           LN P     WI  C+ T ++S+ +NG+    F  K+GLRQ   LSPYLFV+ M  L+  +
Sbjct: 192 LNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMI 251

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                  +  YHPKC+KL+L  L FADDL++F  G +  V+ +   F +F+   GL  +L
Sbjct: 252 DVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISL 311

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            KS++Y  GV              + G+LP R LG+PL +K+++     PL+DKV  ++ 
Sbjct: 312 EKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKIS 371

Query: 543 SWTAKSLSYAG 575
           SWTA+SLSYAG
Sbjct: 372 SWTARSLSYAG 382


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score =  147 bits (370), Expect = 2e-33
 Identities = 79/191 (41%), Positives = 108/191 (56%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           LN+P    +WI  C+ T SYSI  NG+    F GKKG+RQ DP+S +LFVL+M+ L R+L
Sbjct: 160 LNLPPIFINWIWVCISTPSYSIAYNGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSL 219

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                   F  HPKC    +  L FADD+L+FC G    +  + +    F +  GL  NL
Sbjct: 220 DLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINL 279

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            K+++   G            LG+S+G LP R LGVPL S+K+     QPL+D++  R  
Sbjct: 280 QKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFT 339

Query: 543 SWTAKSLSYAG 575
           SWTA+ LS+AG
Sbjct: 340 SWTARHLSFAG 350


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score =  147 bits (370), Expect = 2e-33
 Identities = 79/191 (41%), Positives = 108/191 (56%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           LN+P    +WI  C+ T SYSI  NG+    F GKKG+RQ DP+S +LFVL+M+ L R+L
Sbjct: 160 LNLPPIFINWIWVCISTPSYSIAYNGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSL 219

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                   F  HPKC    +  L FADD+L+FC G    +  + +    F +  GL  NL
Sbjct: 220 DLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINL 279

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            K+++   G            LG+S+G LP R LGVPL S+K+     QPL+D++  R  
Sbjct: 280 QKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFT 339

Query: 543 SWTAKSLSYAG 575
           SWTA+ LS+AG
Sbjct: 340 SWTARHLSFAG 350


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  144 bits (364), Expect = 1e-32
 Identities = 72/191 (37%), Positives = 109/191 (57%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           LN+P    +W+  C+ T  +S+ ING+    F+G++GLRQ DPLSPYLF++ ME L+R L
Sbjct: 66  LNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRML 125

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                    + HPKC    +  L FADD+++F  G+   +  +      FS+A GL  N 
Sbjct: 126 DRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNT 185

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            K+ I+  G+           +G ++G LP R LGV LS  +++ +  QPL+D+V  ++ 
Sbjct: 186 EKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKIN 245

Query: 543 SWTAKSLSYAG 575
           SWT + LSYAG
Sbjct: 246 SWTTRYLSYAG 256


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  143 bits (361), Expect = 3e-32
 Identities = 74/191 (38%), Positives = 107/191 (56%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            LN P     WI  C+ T ++S+ +NG+    F   +GLRQ   LSPYLFV+ M  L+  +
Sbjct: 916  LNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMI 975

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                   +  YHPKCEK+ L  L FADDL++F  G +  ++ +   F +F+   GL  +L
Sbjct: 976  DEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISL 1035

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
             KS+IY  GV              + G+LP R LG+PL +K+++     PLI+ V  ++ 
Sbjct: 1036 EKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKIS 1095

Query: 543  SWTAKSLSYAG 575
            SWTA+SLSYAG
Sbjct: 1096 SWTARSLSYAG 1106


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  143 bits (360), Expect = 4e-32
 Identities = 74/191 (38%), Positives = 106/191 (55%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            L  P K   WI  C+ T ++S+ +N +    F  K+GLRQ   LSPYLFV+ M  L+  +
Sbjct: 761  LKFPEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMNVLSHMI 820

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                   +  YHPKC+KL+L  L FADDL++F  G +  V+ +   F  F+   GL  +L
Sbjct: 821  DVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISL 880

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
             KS++Y   V              + G+LP R LG PL +K+++     PL+DKV  ++ 
Sbjct: 881  EKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKIS 940

Query: 543  SWTAKSLSYAG 575
            SWTA+SLSYAG
Sbjct: 941  SWTARSLSYAG 951


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  142 bits (358), Expect = 6e-32
 Identities = 74/191 (38%), Positives = 106/191 (55%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            LN+P K   WI+ CL T S+S+++NG     F   KGLRQ DP+SPYLFVL ME  +  L
Sbjct: 510  LNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLL 569

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
            ++        YHPK  +L +  L FADD+++F  G    +  + E    F+   GL+ N 
Sbjct: 570  QSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNT 629

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            +K+ +Y  G+            G   G LP R LG+PL S+K++I +  PLI+K+  R  
Sbjct: 630  NKTQLYHAGL-SQSESDSMASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFN 688

Query: 543  SWTAKSLSYAG 575
            SW  + LS+AG
Sbjct: 689  SWVVRLLSFAG 699


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  142 bits (358), Expect = 6e-32
 Identities = 70/191 (36%), Positives = 111/191 (58%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           ++ P++   WIM C+ T S+S+ +NG+    FQ K+GLRQ   LSPYLFV+ M+ L++ L
Sbjct: 146 MDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLL 205

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
               +   F YH +C++L+L  L FADDL++   G    +  + E F  F++  GL  ++
Sbjct: 206 DQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISM 265

Query: 363 SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
            KS+IY  GV                G+LP R LG+PL +K+++ T   PL++ +  ++ 
Sbjct: 266 EKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIG 325

Query: 543 SWTAKSLSYAG 575
           +WT + LSYAG
Sbjct: 326 TWTTRYLSYAG 336


>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
           gi|346683183|ref|YP_004842114.1| hypothetical protein
           BemaM_p069 [Beta macrocarpa]
           gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
           hypothetical protein [Beta macrocarpa]
          Length = 238

 Score =  142 bits (357), Expect = 8e-32
 Identities = 79/164 (48%), Positives = 98/164 (59%), Gaps = 10/164 (6%)
 Frame = +3

Query: 3   LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
           L  P +  +WIM C+ TVSYSIL+NGKPT PF  KKG+RQ DP+SP+LF + MEYL+R L
Sbjct: 70  LGFPSQFITWIMECVTTVSYSILLNGKPTTPFPSKKGVRQGDPMSPFLFAIGMEYLSRCL 129

Query: 183 KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYF----------TKF 332
             L   P+FNYHP+CEKL +  + FA DLLLF R D   V L+Y+ F           ++
Sbjct: 130 LELTLNPNFNYHPRCEKLAITHMMFASDLLLFSRADTRSVILLYQAFQSSLKPLERRAEY 189

Query: 333 SQALGLIANLSKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSL 464
           S   GL ANL KSS+  GG+           LGI     P RSL
Sbjct: 190 SICEGLEANLDKSSV--GGLCEAEKASMQEILGIWMCLSPIRSL 231


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  140 bits (354), Expect = 2e-31
 Identities = 77/191 (40%), Positives = 105/191 (54%)
 Frame = +3

Query: 3    LNIPLKLFSWIMSCLCTVSYSILINGKPTRPFQGKKGLRQSDPLSPYLFVLIMEYLTRTL 182
            L++PL    WI  C+ + SYSI  NG+    FQGKKG+RQ DP+S +LFVL+M+ L+++L
Sbjct: 656  LDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSL 715

Query: 183  KTLKNFPDFNYHPKCEKLNLVQLGFADDLLLFCRGDRGCVQLMYEYFTKFSQALGLIANL 362
                    FN HP C    +  L FADD+L+F  G    +  +      F Q  GL  N 
Sbjct: 716  DLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGLGINR 775

Query: 363  SKSSIYFGGVXXXXXXXXXXXLGISKGELPFRSLGVPLSSKKISITQCQPLIDKVLGRVQ 542
             K+ +   G            LGI+ G LP R LGVPL S+K+     QPL+D++  R  
Sbjct: 776  EKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFT 835

Query: 543  SWTAKSLSYAG 575
            SWTA+ LS+AG
Sbjct: 836  SWTARHLSFAG 846