BLASTX nr result
ID: Atropa21_contig00042232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042232
(565 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABJ96383.1| hypothetical protein [Prunus persica] 87 2e-15
ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824... 82 7e-14
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846... 80 4e-13
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 76 5e-12
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 75 9e-12
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 74 3e-11
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 73 6e-11
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 73 6e-11
emb|CCH50966.1| T4.5 [Malus x robusta] 73 6e-11
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 72 7e-11
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 72 1e-10
ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S... 71 2e-10
emb|CAN62310.1| hypothetical protein VITISV_008928 [Vitis vinifera] 71 2e-10
ref|XP_006493639.1| PREDICTED: LRR receptor-like serine/threonin... 67 2e-10
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 70 3e-10
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor] 70 3e-10
ref|XP_004246220.1| PREDICTED: uncharacterized protein LOC101249... 69 6e-10
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 69 6e-10
emb|CAE04384.1| OSJNBa0027G07.26 [Oryza sativa Japonica Group] 69 6e-10
gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa] 69 8e-10
>gb|ABJ96383.1| hypothetical protein [Prunus persica]
Length = 193
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/59 (71%), Positives = 48/59 (81%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQP 388
DN+GA+YL ANP F ARTKHVE+D+HFVR QV G +SVQFIS+ QLADI TKPLS P
Sbjct: 119 DNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSSP 177
>ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824035 [Brachypodium
distachyon]
Length = 270
Score = 82.4 bits (202), Expect = 7e-14
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DNIGA+YL +NP F ARTKH+EVD+HFVR +V + ++FISS QLADIFTKPLS P+
Sbjct: 85 DNIGATYLSSNPVFHARTKHIEVDYHFVRERVAQKLLQIKFISSKDQLADIFTKPLSLPL 144
Query: 384 SSHQTQAKNLDKP 346
A D P
Sbjct: 145 FEDTIVANPPDTP 157
>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
distachyon]
Length = 989
Score = 80.1 bits (196), Expect = 4e-13
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQ 391
DNIGA+YL ANP F ARTKH+E+DFHFVR +V +G + V+ IS+ QLAD+FTKP +Q
Sbjct: 914 DNIGATYLSANPVFHARTKHIEIDFHFVREKVALGALDVRSISTADQLADVFTKPATQ 971
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 76.3 bits (186), Expect = 5e-12
Identities = 38/72 (52%), Positives = 49/72 (68%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DN+GA+YL NP F ARTKH+E+D+HFVR +V + ++FISS Q+AD FTKPL P
Sbjct: 2002 DNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQLEIKFISSGDQVADGFTKPLGAPQ 2061
Query: 384 SSHQTQAKNLDK 349
+ NLDK
Sbjct: 2062 LRNFRYNLNLDK 2073
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 75.5 bits (184), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DN+GA+YL ANP F ARTKH+E+D+HFVR QV + +QFIS+ QLAD FTK L P
Sbjct: 862 DNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSLPAPS 921
Query: 384 SSHQTQAKNL 355
+ NL
Sbjct: 922 LAQYRHNLNL 931
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 73.6 bits (179), Expect = 3e-11
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DNIGA+YL ANP F ARTKH+EVD+HFVR +V + ++FISS QLAD FTK +Q +
Sbjct: 843 DNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRFISSGDQLADGFTK--AQSL 900
Query: 384 SSHQTQAKNLDK-PS*LEGGC 325
S + NL+ +EGGC
Sbjct: 901 SKLRIFRNNLNLCEVMIEGGC 921
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 72.8 bits (177), Expect = 6e-11
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLS 394
DN+GA+Y+ ANP F ARTKH+EVD+HFVR QV + + F+SS Q+AD FTKP+S
Sbjct: 829 DNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFTKPIS 885
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 72.8 bits (177), Expect = 6e-11
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DN+GA YL ANP F ARTKH+EVD+HFVR +V + + F+S+ Q+AD FTKPLS +
Sbjct: 1381 DNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFTKPLSVRL 1440
Query: 384 SSHQTQAKNLDKPS*LEG 331
+ NL + EG
Sbjct: 1441 LENFKSNLNLVRSGLREG 1458
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 72.8 bits (177), Expect = 6e-11
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DN L NP F ARTKHVE+D+H++R +V +GHI VQ ++S+ Q+ADIFTKPL+
Sbjct: 1579 DNKSVIALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADR 1638
Query: 384 SSHQTQAKNLDKPS*LEGGC 325
+ T ++ PS GC
Sbjct: 1639 FAALTSKLSVRSPSFSLRGC 1658
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 72.4 bits (176), Expect = 7e-11
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DNIGA+YL ANP F ARTKH+EVD+HFVR +V + ++FISS QLAD FTK +Q +
Sbjct: 1009 DNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRFISSGDQLADGFTK--AQSL 1066
Query: 384 SSHQTQAKNLD 352
S Q NL+
Sbjct: 1067 SKLQIFRNNLN 1077
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DNIGA+YL NP F ARTKH+E+D+HFVR QV +++QF+ S Q+AD FTK L P+
Sbjct: 979 DNIGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQVADGFTKAL--PV 1036
Query: 384 SSHQTQAKNLD 352
Q NL+
Sbjct: 1037 RQLQMFRNNLN 1047
>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
gi|241942867|gb|EES16012.1| hypothetical protein
SORBIDRAFT_08g015513 [Sorghum bicolor]
Length = 757
Score = 71.2 bits (173), Expect = 2e-10
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPL 397
DN+GA YL ANP F ARTKH+E+DFHFVR +V + ++FISS QLAD FTK L
Sbjct: 693 DNLGAKYLSANPVFHARTKHIEIDFHFVRERVAQKLLDIRFISSEDQLADGFTKSL 748
>emb|CAN62310.1| hypothetical protein VITISV_008928 [Vitis vinifera]
Length = 406
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQ 391
DN+G YL +NP F ARTKH+E+D+HF+R QV +I V+FIS Q+ADI TKPL Q
Sbjct: 330 DNVGVIYLCSNPVFHARTKHIELDYHFIREQVQQCNIQVRFISLDDQIADILTKPLGQ 387
>ref|XP_006493639.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Citrus sinensis]
Length = 1668
Score = 66.6 bits (161), Expect(2) = 2e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQP 388
DNI A+ L NP F +RTKH+E+D HF+R +V G + + ++ S Q+ADI TKPLS P
Sbjct: 408 DNISATELAKNPVFHSRTKHIEIDVHFIRDKVLSGDLKICYVPSEDQIADILTKPLSSP 466
Score = 24.6 bits (52), Expect(2) = 2e-10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 401 LCPSRFHLIKHKLRIWTNLLSLRGAVR 321
L +F+ ++ KL +++ LSLRGAV+
Sbjct: 463 LSSPQFNYLRDKLNVFSCPLSLRGAVK 489
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 70.5 bits (171), Expect = 3e-10
Identities = 36/72 (50%), Positives = 46/72 (63%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DN+GA YL ANP F ARTKH+EVD+HFVR +V + + F+ S Q+AD FTK LS +
Sbjct: 1364 DNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSVRL 1423
Query: 384 SSHQTQAKNLDK 349
H NL +
Sbjct: 1424 LEHFKHNLNLTR 1435
>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
Length = 1012
Score = 70.5 bits (171), Expect = 3e-10
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPL 397
DN+GA+YL ANP F ARTKH+E+DFHFVR +V + V+FIS+ QLAD FTK L
Sbjct: 940 DNLGATYLSANPIFHARTKHIEIDFHFVRERVAQKLLEVRFISTGDQLADGFTKAL 995
>ref|XP_004246220.1| PREDICTED: uncharacterized protein LOC101249672 [Solanum
lycopersicum]
Length = 645
Score = 69.3 bits (168), Expect = 6e-10
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DNI A YL AN F R+KH+E+D+HF R +V G + V++I S Q AD+FTK LS P
Sbjct: 176 DNISAIYLTANRVFHQRSKHIEIDYHFFREKVARGQLCVKYIPSTDQTADVFTKALSSPR 235
Query: 384 SSHQTQAKNLDKPS 343
+H + KP+
Sbjct: 236 FAHLRSKLTVSKPN 249
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 69.3 bits (168), Expect = 6e-10
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLS 394
DN+GA YL ANP F ARTKH+EVD+HFVR +V + ++++ + Q+AD FTKPLS
Sbjct: 1241 DNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLS 1297
>emb|CAE04384.1| OSJNBa0027G07.26 [Oryza sativa Japonica Group]
Length = 243
Score = 69.3 bits (168), Expect = 6e-10
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLS 394
DNIGA YL ANP F ARTKH+EVD+HFVR +V + +++ISS Q+AD FTK L+
Sbjct: 170 DNIGAKYLSANPVFHARTKHIEVDYHFVRERVSRRLLEIEYISSKDQVADGFTKALA 226
>gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa]
Length = 216
Score = 68.9 bits (167), Expect = 8e-10
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = -2
Query: 564 DNIGASYLGANPCFKARTKHVEVDFHFVR*QV*VGHISVQFISSIGQLADIFTKPLSQPI 385
DN+GA+YL ANP F +R KH+ +D+HFVR V G + V +S+ QLAD TKPL +P
Sbjct: 141 DNVGATYLSANPVFHSRMKHIAIDYHFVRDNVQSGRLRVTHVSTHDQLADALTKPLPRPR 200
Query: 384 SSHQT 370
S T
Sbjct: 201 FSQIT 205