BLASTX nr result

ID: Atropa21_contig00042222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042222
         (457 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362058.1| PREDICTED: LOB domain-containing protein 38-...   125   3e-33
ref|XP_004238097.1| PREDICTED: uncharacterized protein LOC101261...   116   2e-29

>ref|XP_006362058.1| PREDICTED: LOB domain-containing protein 38-like [Solanum
           tuberosum]
          Length = 204

 Score =  125 bits (313), Expect(2) = 3e-33
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 6/100 (6%)
 Frame = -2

Query: 456 WHVCQKAMQTVLAGGNLRPFFAGILTQPYVDDSSESFRFGGACDIPNQFANKSGS-FALG 280
           WHVCQKA+QTVLAGGNLRP FAGILT P+ DD   SFRFGGA D+PNQF+NKS S F  G
Sbjct: 91  WHVCQKAVQTVLAGGNLRPVFAGILTPPWFDD---SFRFGGAWDMPNQFSNKSESMFIDG 147

Query: 279 SDHIDTTEWIGSEKRGNTTSSFGSET-----VIGCVTGFG 175
           SD I+  EWI SEKR NT+SSFGSET      +G  +G+G
Sbjct: 148 SDQIEGMEWISSEKRWNTSSSFGSETELSDISLGLDSGYG 187



 Score = 42.4 bits (98), Expect(2) = 3e-33
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
 Frame = -3

Query: 182 GLDNGNGY-EGVKGEEPKLLNLFV 114
           GLD+G GY EGVKGEEPKLLNLFV
Sbjct: 181 GLDSGYGYAEGVKGEEPKLLNLFV 204


>ref|XP_004238097.1| PREDICTED: uncharacterized protein LOC101261022 [Solanum
           lycopersicum]
          Length = 156

 Score =  116 bits (290), Expect(2) = 2e-29
 Identities = 61/92 (66%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = -2

Query: 456 WHVCQKAMQTVLAGGNLRPFFAGILTQPYVDDSSESFRFGGACDIPNQFANKSGS-FALG 280
           WHVCQKA+QTVLAGGNLRP  AGILT PY D+   SFR GGA D+PNQF NKS S F  G
Sbjct: 43  WHVCQKAVQTVLAGGNLRPVLAGILTPPYFDN---SFRCGGAWDMPNQFCNKSDSMFIDG 99

Query: 279 SDHIDTTEWIGSEKRGNTTSSFGSETVIGCVT 184
           S+ I+  EWI SEKR NT+S FGSET +  V+
Sbjct: 100 SEQIEGMEWISSEKRWNTSSCFGSETELSDVS 131



 Score = 38.9 bits (89), Expect(2) = 2e-29
 Identities = 20/24 (83%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
 Frame = -3

Query: 182 GLDNGNGY-EGVKGEEPKLLNLFV 114
           GLD+G GY E VKGEEPKLLNLFV
Sbjct: 133 GLDSGYGYAECVKGEEPKLLNLFV 156


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