BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042199
         (887 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   113   2e-35
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   1e-34
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    94   2e-34
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    93   1e-31
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    98   4e-31
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    93   5e-31
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    89   2e-30
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            89   2e-30
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   100   2e-30
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               100   1e-29
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    81   3e-29
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    81   4e-29
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    90   5e-29
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    84   5e-29
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 88   9e-29
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    85   1e-28
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    98   1e-28
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                92   1e-27
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    78   2e-27
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   2e-24

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  113 bits (282), Expect(2) = 2e-35
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 2/212 (0%)
 Frame = +1

Query: 247  LLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS*R 423
            + + +SK+L  R+K ++  +VN   + F+ GR +  N+L+  +L+R Y RK   P    +
Sbjct: 523  IYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMK 582

Query: 424  LI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RLKA 603
            +   +      WS LE LL  FGFP +FV  I+ CV+T+ +      I     +  +   
Sbjct: 583  VDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLR 642

Query: 604  RGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN*AS 780
            +G  ++     L M YLSR L ++   PDF +HP C+   +THL F DDL++F + + +S
Sbjct: 643  QGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSS 702

Query: 781  VGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
            +  +  A   FS  +GL  + EKSNI+   VD
Sbjct: 703  LDHMNVAFQKFSHASGLAASHEKSNIYFCGVD 734



 Score = 63.5 bits (153), Expect(2) = 2e-35
 Identities = 29/84 (34%), Positives = 47/84 (55%)
 Frame = +2

Query: 8   ACIDSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTS 187
           A  +   A+ GI  +K PGLDG+ + FF+ +     ++I   + E  NN RM + +N   
Sbjct: 439 ASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIV 498

Query: 188 INLIPKISNTENAGQFRPISCCNV 259
           + L+PK+ +     +FRPI+CC V
Sbjct: 499 VTLLPKVQHATRVKEFRPIACCTV 522


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  108 bits (269), Expect(2) = 1e-34
 Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 2/207 (0%)
 Frame = +1

Query: 247  LLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS*R 423
            L + +SKIL +RL+ V+  +V+     F+  R +  N+L+  +L+R YNR+   P    +
Sbjct: 526  LYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIK 585

Query: 424  LI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RLKA 603
            +   +      W  LE +L   GFP  F++ I+ CV T+ +      I        +   
Sbjct: 586  VDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLR 645

Query: 604  RGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN*AS 780
            +G  ++     L M YLSR +  M + P+F +HP C+  +LTHL F DDL++F + + +S
Sbjct: 646  QGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASS 705

Query: 781  VGRIMEALTHFSATTGLEENTEKSNIF 861
            + +IM A   FS  +GL+ + EKS I+
Sbjct: 706  ISKIMAAFNSFSKASGLQASIEKSCIY 732



 Score = 66.2 bits (160), Expect(2) = 1e-34
 Identities = 29/76 (38%), Positives = 48/76 (63%)
 Frame = +2

Query: 29  AMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKI 208
           A+  I   K PGLDG+ S FF+ +  +  ++I + +L+   NG M + +N T++ LIPKI
Sbjct: 449 ALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKI 508

Query: 209 SNTENAGQFRPISCCN 256
              ++A  +RPI+CC+
Sbjct: 509 DEAKHAKDYRPIACCS 524


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 94.4 bits (233), Expect(2) = 2e-34
 Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQHPNAS* 420
            N + + +SK+L +RL+ +LP  ++ + + FV GR L  NVL+  +L++ + +    N S 
Sbjct: 529  NAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQA---NISS 585

Query: 421  RLI*E----RHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG 588
            R + +    +     GW  + E L     P +FV  I  C+T+  F            KG
Sbjct: 586  RGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKG 645

Query: 589  *RLKARGSYITLAI-VLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYK 765
             +   +G  ++ ++ V+ M  LSR+L          YHP   + +++ LAF DDLMIFY 
Sbjct: 646  SKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYD 705

Query: 766  KN*ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
               +S+  I   L  F   +GLE NTEKS ++ A ++
Sbjct: 706  GKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLE 742



 Score = 79.3 bits (194), Expect(2) = 2e-34
 Identities = 37/80 (46%), Positives = 50/80 (62%)
 Frame = +2

Query: 17  DSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINL 196
           D  +  F +  NK+PG DGY S FF+ T SI G  +  AV E   +GR+L Q NST++ +
Sbjct: 450 DIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTM 509

Query: 197 IPKISNTENAGQFRPISCCN 256
           +PK  N +   +FRPISCCN
Sbjct: 510 VPKKPNADRITEFRPISCCN 529


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 92.8 bits (229), Expect(2) = 1e-31
 Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 5/198 (2%)
 Frame = +1

Query: 247 LLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS*R 423
           + + +SKIL  R++ VL ++V+   + FV GR +  N+++ H+L++ Y+RK   P    +
Sbjct: 206 IYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVK 265

Query: 424 LI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*K---RMVIAMAIVKG*R 594
           +  ++      W  ++ L+   GF  KFV  ++ C+TT  +       +    A  KG R
Sbjct: 266 IDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKGLR 325

Query: 595 LKARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN 771
              +G  I+    V+ M YL+  L ++ +   FR+HP CK   L H+ FVDDL++F + +
Sbjct: 326 ---QGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLFSRGD 382

Query: 772 *ASVGRIMEALTHFSATT 825
             SV ++ EA + FSA +
Sbjct: 383 VDSVSQLFEAFSLFSAAS 400



 Score = 71.2 bits (173), Expect(2) = 1e-31
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = +2

Query: 2   KWACIDSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNS 181
           K+  ++  N +F +  +K PG+DGY   FF+ + +I G+ + DA+L+    G M + +N 
Sbjct: 120 KFTAVEVKNVLFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINC 179

Query: 182 TSINLIPKISNTENAGQFRPISCCNV 259
           T + L+PK  N  +   FRPI+CC+V
Sbjct: 180 TYMTLLPKEVNVTSVKNFRPIACCSV 205


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 98.2 bits (243), Expect(2) = 4e-31
 Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + +SKI+  RLKLVLP  +    + FV  R L+ N+L+  +L++ Y++       +
Sbjct: 536  NVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCA 595

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++   +      W  L  +    GFP +F+  I +C+TT  F  +         +  R 
Sbjct: 596  IKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRG 655

Query: 598  KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
              +G  ++    V+ M  LS++L K +    F YHP CK   LTHL+F DDLM+      
Sbjct: 656  LRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKI 715

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNA 867
             S+ RI++    F+  +GL  + EKS ++ A
Sbjct: 716  RSIERIIKVFDEFAKWSGLRISLEKSTVYLA 746



 Score = 64.3 bits (155), Expect(2) = 4e-31
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +2

Query: 32  MFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKIS 211
           +F +  +K+PG DGY S FF+ T  I G++ T AV      G + + +NST + LIPK +
Sbjct: 462 LFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKT 521

Query: 212 NTENAGQFRPISCCNV 259
                  +RPISCCNV
Sbjct: 522 EAREMKDYRPISCCNV 537


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 93.2 bits (230), Expect(2) = 5e-31
 Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + +SK+L  RLK +LP  +    + F+S R L+ N+L+  +L++ Y++    P  +
Sbjct: 802  NVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCA 861

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++   +      W  L   L     P KF+  I +C++T  F  +        V G  L
Sbjct: 862  MKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQ--------VNG--L 911

Query: 598  KARGSYITLAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN*A 777
            +   S      V+ M  LS +L K +    F YHP C++  LTHL F DD+M+F   +  
Sbjct: 912  RQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAH 971

Query: 778  SVGRIMEALTHFSATTGLEENTEKSNIFNAWVDT 879
            S+  ++     F+A +GL  + EKS +F A + +
Sbjct: 972  SLEGVLAIFKDFAAFSGLNISLEKSTLFMASISS 1005



 Score = 68.9 bits (167), Expect(2) = 5e-31
 Identities = 34/75 (45%), Positives = 47/75 (62%)
 Frame = +2

Query: 35  FGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKISN 214
           F I  NK+PG DGY   FFR+T S+ G+++T A+      G + + LNST + LIPK + 
Sbjct: 729 FSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTY 788

Query: 215 TENAGQFRPISCCNV 259
            +    +RPISCCNV
Sbjct: 789 AKEMKDYRPISCCNV 803


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 88.6 bits (218), Expect(2) = 2e-30
 Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + +SK+L  RL+ +L A++  + + F+ GRSL  NVL+  +++  YNR    P   
Sbjct: 390  NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++  ++      W  +   L     P +++  I  C+TT  F            +  + 
Sbjct: 450  LKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKG 509

Query: 598  KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
              +G  ++    VL M   S++L          YHP   D  ++HL F DD+MIF+    
Sbjct: 510  LRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGS 569

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
            +S+  I E L  F+  +GL+ N +KS +F A +D
Sbjct: 570  SSMHGICETLDDFADWSGLKVNKDKSQLFQAGLD 603



 Score = 71.6 bits (174), Expect(2) = 2e-30
 Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +2

Query: 17  DSTNAMFGISP-NKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSIN 193
           D   A F   P NK  G DGY   FFRDT SI G ++  A+ E  ++G++L+Q N+T++ 
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLV 369

Query: 194 LIPKISNTENAGQFRPISCCN 256
           LIPK SN     +FRPISC N
Sbjct: 370 LIPKTSNACTISEFRPISCLN 390


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 88.6 bits (218), Expect(2) = 2e-30
 Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + +SK+L  RL+ +L A++  + + F+ GRSL  NVL+  +++  YNR    P   
Sbjct: 390  NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++  ++      W  +   L     P +++  I  C+TT  F            +  + 
Sbjct: 450  LKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKG 509

Query: 598  KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
              +G  ++    VL M   S++L          YHP   D  ++HL F DD+MIF+    
Sbjct: 510  LRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGS 569

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
            +S+  I E L  F+  +GL+ N +KS +F A +D
Sbjct: 570  SSMHGICETLDDFADWSGLKVNKDKSQLFQAGLD 603



 Score = 71.6 bits (174), Expect(2) = 2e-30
 Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +2

Query: 17  DSTNAMFGISP-NKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSIN 193
           D   A F   P NK  G DGY   FFRDT SI G ++  A+ E  ++G++L+Q N+T++ 
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLV 369

Query: 194 LIPKISNTENAGQFRPISCCN 256
           LIPK SN     +FRPISC N
Sbjct: 370 LIPKTSNACTISEFRPISCLN 390


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  100 bits (249), Expect(2) = 2e-30
 Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
 Frame = +1

Query: 241 NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
           N L + +SKIL  RLK +LP  +    + FV  R L+ NVL+  +L++ Y++       +
Sbjct: 257 NVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCA 316

Query: 418 *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
            ++   +      WS L  +L    FP +F+  I +C++T  F     +     + G   
Sbjct: 317 MKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFS----IQVNGELAGYFR 372

Query: 598 KARG-----SYITLAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFY 762
            ARG     S      V+ M  LSR+L K +   +F YHP CK   LTHL F DDLMI  
Sbjct: 373 SARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILT 432

Query: 763 KKN*ASVGRIMEALTHFSATTGLEENTEKSNIFNAWV 873
                SV  I++ L  F+A  GL+   EK+ ++ A V
Sbjct: 433 DGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGV 469



 Score = 59.3 bits (142), Expect(2) = 2e-30
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = +2

Query: 32  MFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKIS 211
           +F +  +K+PG DGY S F++ +  I G+++  A+      G + + +NST + LIPK  
Sbjct: 183 IFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKK 242

Query: 212 NTENAGQFRPISCCNV 259
                  +RPISCCNV
Sbjct: 243 EAREIKDYRPISCCNV 258


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  100 bits (249), Expect(2) = 1e-29
 Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
 Frame = +1

Query: 241 NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
           N + + +SKIL  RLKL+LP  +    ++FV  R L+ NVL+  DL++ Y++       +
Sbjct: 89  NVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCA 148

Query: 418 *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
            ++   +      WS L   L    FP  F+  I +C+TT  F  +         +  R 
Sbjct: 149 IKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRG 208

Query: 598 KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
             +G  ++    V+ M  LS++L K+  +    YHP CK   LTHL+F DDLMI      
Sbjct: 209 LRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQC 268

Query: 775 ASVGRIMEALTHFSATTGLEENTEKSNIFNA 867
            S+  I+E    FS  +GL+ + EKS IF+A
Sbjct: 269 RSIEGIIEVFDLFSKWSGLKISMEKSTIFSA 299



 Score = 56.6 bits (135), Expect(2) = 1e-29
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = +2

Query: 32  MFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKIS 211
           +F +  +K+PG DG+ S FF+++  I G +   A+      G + + +NST + LIPK  
Sbjct: 15  LFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKL 74

Query: 212 NTENAGQFRPISCCNV 259
            ++    +RPISCCNV
Sbjct: 75  ESKEMKDYRPISCCNV 90


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score = 81.3 bits (199), Expect(2) = 3e-29
 Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + ++K+L  RLK +L  +++ + + F+ GR L  NVL+  +++  YN K       
Sbjct: 531  NTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGM 590

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++   +      W  +         P KFV  I  C++T  F       +    K  + 
Sbjct: 591  LKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKG 650

Query: 598  KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
              +G  ++    VL M   S +L         +YHP   D  ++HL F DD+M+F+    
Sbjct: 651  LRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGS 710

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
            +S+  I EAL  F++ +GL  N +K+N++ A  D
Sbjct: 711  SSLHGISEALDDFASWSGLHVNKDKTNLYLAGTD 744



 Score = 74.7 bits (182), Expect(2) = 3e-29
 Identities = 35/81 (43%), Positives = 51/81 (62%)
 Frame = +2

Query: 14  IDSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSIN 193
           +D   A F +  NK  G DGY S FF+    + G ++T+AV E   +G++L+Q N+T++ 
Sbjct: 451 LDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLV 510

Query: 194 LIPKISNTENAGQFRPISCCN 256
           LIPKI+N+     FRPISC N
Sbjct: 511 LIPKITNSSKMTDFRPISCLN 531


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score = 80.9 bits (198), Expect(2) = 4e-29
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + ++K+L  RLK +L  +++ + + F+ GR L  NVL+  +++  YN K       
Sbjct: 531  NTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGM 590

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++   +      W  +         P KFV  I  C++T  F       +    K  + 
Sbjct: 591  LKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKG 650

Query: 598  KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
              +G  ++    VL M   S +L          YHP   D  ++HL F DD+M+F+    
Sbjct: 651  LRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGS 710

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
            +S+  I EAL  F++ +GL  N +K+N++ A  D
Sbjct: 711  SSLHGISEALDDFASWSGLHVNKDKTNLYLAGTD 744



 Score = 74.7 bits (182), Expect(2) = 4e-29
 Identities = 35/81 (43%), Positives = 51/81 (62%)
 Frame = +2

Query: 14  IDSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSIN 193
           +D   A F +  NK  G DGY S FF+    + G ++T+AV E   +G++L+Q N+T++ 
Sbjct: 451 LDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLV 510

Query: 194 LIPKISNTENAGQFRPISCCN 256
           LIPKI+N+     FRPISC N
Sbjct: 511 LIPKITNSSKMTDFRPISCLN 531


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 90.1 bits (222), Expect(2) = 5e-29
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + +SKIL  RLKL+LP+ +    + FV  R L+ NVL+  +L++ Y+++   P  +
Sbjct: 833  NVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCA 892

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++   +      W  L   L    FP  F   I +C++T  F  +            R 
Sbjct: 893  MKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRG 952

Query: 598  KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
              +G  ++    V+ M  LS ++ + +   +  YHP C+   LTHL F DDLM+F   + 
Sbjct: 953  LRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQ 1012

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVDTN 882
             S+  ++     F+  +GL+ + EKS I+ A V  +
Sbjct: 1013 WSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSAS 1048



 Score = 65.1 bits (157), Expect(2) = 5e-29
 Identities = 33/76 (43%), Positives = 44/76 (57%)
 Frame = +2

Query: 32  MFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKIS 211
           +F +  NK+PG DGY S FF+ T S+TG D   A+      G + + LN+T + LIPK  
Sbjct: 759 LFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKD 818

Query: 212 NTENAGQFRPISCCNV 259
                  +RPISCCNV
Sbjct: 819 EAIEMKDYRPISCCNV 834


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score = 84.0 bits (206), Expect(2) = 5e-29
 Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
 Frame = +1

Query: 247  LLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS*R 423
            L + ++++L  RL+ +L  +++   + F+ GR L  NVL+  +L++ YNR+   P    +
Sbjct: 485  LYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLK 544

Query: 424  LI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RLKA 603
            +   +      W  +   L   G P +FV  I  C++T  F            K  R   
Sbjct: 545  VDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLR 604

Query: 604  RGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN*AS 780
            +G+ ++    VL M   S +L+   +     YHP      ++HL F DD+M+F+    +S
Sbjct: 605  QGNPLSPFLFVLAMEVFSSLLNSRFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGGSSS 664

Query: 781  VGRIMEALTHFSATTGLEENTEKSNIFNAWVD 876
            +  I EAL  F+  +GL  N EK++++ A +D
Sbjct: 665  LHGISEALEDFAFWSGLVLNREKTHLYLAGLD 696



 Score = 71.2 bits (173), Expect(2) = 5e-29
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = +2

Query: 17  DSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINL 196
           D  +A F    NK  G DG+   FF++T S+ G ++TDAV E   +  +L+Q N+T++ L
Sbjct: 400 DIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVL 459

Query: 197 IPKISNTENAGQFRPISC 250
           IPKI+N      FRPISC
Sbjct: 460 IPKITNASKMNDFRPISC 477


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 88.2 bits (217), Expect(2) = 9e-29
 Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
 Frame = +1

Query: 241 NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
           N + + +SKI+  RLK++LP  +    + FV  R L+ NVL+  +L++ Y++    P  +
Sbjct: 109 NVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCA 168

Query: 418 *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
            ++   +      W  L   L    FP  F   I +C++T  F  +            R 
Sbjct: 169 MKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRG 228

Query: 598 KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
             +G  ++    V+ M  LS ++   +   +  YHP CK   LTHL F DDLM+F     
Sbjct: 229 LRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQ 288

Query: 775 ASVGRIMEALTHFSATTGLEENTEKSNIFNAWV 873
            SV  ++     F+  +GL  + EKS ++ A V
Sbjct: 289 RSVEGVINIFKEFAGKSGLHISLEKSTLYLAGV 321



 Score = 66.2 bits (160), Expect(2) = 9e-29
 Identities = 34/81 (41%), Positives = 46/81 (56%)
 Frame = +2

Query: 17  DSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINL 196
           ++   +F +  NK PG DGY S FF+ T SITG+D   A+      G + + LN+T + L
Sbjct: 30  ENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILAL 89

Query: 197 IPKISNTENAGQFRPISCCNV 259
           IPK         +RPISCCNV
Sbjct: 90  IPKKDEATLMRDYRPISCCNV 110


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score = 84.7 bits (208), Expect(2) = 1e-28
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N + + +SK+L  RLK  LPA ++ + + F+ GR  + NVL+  +L+  YN+K   P++ 
Sbjct: 427  NTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSM 486

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
             ++   +      W  +   L     P KF   I+ C++T  F     VI      G   
Sbjct: 487  LKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFS----VILNGHSAGHFW 542

Query: 598  KARG-----SYITLAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFY 762
             ++G            VL M   S +L          YHP     +++HL F DD+MIF+
Sbjct: 543  SSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFF 602

Query: 763  KKN*ASVGRIMEALTHFSATTGLEENTEKSNIFNA 867
                +S+  I+E+L  F+  +GL  NT K+ +++A
Sbjct: 603  DGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHA 637



 Score = 69.3 bits (168), Expect(2) = 1e-28
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = +2

Query: 26  NAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPK 205
           NA F +  NK  G DG+   FF     I G ++T+A+ E   +G++L+Q N+T++ LIPK
Sbjct: 351 NAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPK 410

Query: 206 ISNTENAGQFRPISCCN 256
           I+N  +   FRPISC N
Sbjct: 411 ITNASSMSDFRPISCLN 427


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 97.8 bits (242), Expect(2) = 1e-28
 Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 2/217 (0%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N L + +SKI+  RLKLVLP  +    + FV  R L+ NVL+  ++++ Y++       +
Sbjct: 424  NVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCA 483

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*K-RMVIAMAIVKG*R 594
             ++   +      W  L  +L    FP +F   I +C+TT  F  +    +A        
Sbjct: 484  LKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARE 543

Query: 595  LKARGSYITLAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
            L+   S      V+ M  LS++L K      F YHP C+   LTHL+F DDLMI      
Sbjct: 544  LRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSDGKV 603

Query: 775  ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVDTNL 885
             S+  I++ L  F+  +GL+ + EKS ++ A V  ++
Sbjct: 604  RSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASV 640



 Score = 56.2 bits (134), Expect(2) = 1e-28
 Identities = 27/76 (35%), Positives = 43/76 (56%)
 Frame = +2

Query: 32  MFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKIS 211
           +F +  +K+PG DGY + F++   +I G +   A+      G + + +NST + LIPK  
Sbjct: 350 VFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKK 409

Query: 212 NTENAGQFRPISCCNV 259
             +    +RPISCCNV
Sbjct: 410 EAKEMKDYRPISCCNV 425


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 92.4 bits (228), Expect(2) = 1e-27
 Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
 Frame = +1

Query: 241 NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
           N L + +SKI+  RLKL+LP  +    + FV  R L+ N+L+  +L++ Y++       +
Sbjct: 183 NVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCA 242

Query: 418 *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
            ++   +      WS L   L    F   F+  I +C+TT  F  +     +   +  R 
Sbjct: 243 IKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRG 302

Query: 598 KARGSYIT-LAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQLTHLAFVDDLMIFYKKN* 774
             +G  ++    V+ M  LS++L K + +  F +HP C+   LTHL+F DDLM+      
Sbjct: 303 LRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKT 362

Query: 775 ASVGRIMEALTHFSATTGLEENTEKSNIFNAWV 873
            S+  I+E    F   +GL  + EKS ++ A V
Sbjct: 363 RSIEGILEVFDEFCKRSGLRISLEKSTLYMAGV 395



 Score = 58.2 bits (139), Expect(2) = 1e-27
 Identities = 29/76 (38%), Positives = 43/76 (56%)
 Frame = +2

Query: 32  MFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPKIS 211
           +F +  +K+PG DGY S F++ T  I G++ T  V      G + + +NS  + LIPK  
Sbjct: 109 LFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKL 168

Query: 212 NTENAGQFRPISCCNV 259
             +    +RPISCCNV
Sbjct: 169 AAKEMRDYRPISCCNV 184


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score = 77.8 bits (190), Expect(2) = 2e-27
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHDLLRYYNRKQ-HPNAS 417
            N   + ++K+L  RLK  L  +V  + +TF+ GR +  N+L+  +++  Y++    P  +
Sbjct: 357  NTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCT 416

Query: 418  *RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKFP*KRMVIAMAIVKG*RL 597
              +   +      W  +   L  F  P   +  I  C+++ KF     V     + G   
Sbjct: 417  FMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFS----VCVNGELAGFFA 472

Query: 598  KARG-----SYITLAIVLVM*YLSRILSK-MSRLPDFRYHPMCKDQQLTHLAFVDDLMIF 759
            + RG            V+ M  LS  + + ++  P FRYH  C    L+HL F DDL++F
Sbjct: 473  RRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMF 532

Query: 760  YKKN*ASVGRIMEALTHFSATTGLEENTEKSNIFNAWVDTN 882
               +  SV  + +A ++F + + L+ N  +S IF A VD N
Sbjct: 533  CNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGN 573



 Score = 72.0 bits (175), Expect(2) = 2e-27
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +2

Query: 17  DSTNAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDA-VLETLNNGRMLQQLNSTSIN 193
           D     F ++PNK+PG DG+   FF+    + G+++  A V E  + G +L +LNST I 
Sbjct: 277 DIRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIIT 336

Query: 194 LIPKISNTENAGQFRPISCCN 256
           L+PK++N      FRPISCCN
Sbjct: 337 LVPKVANPTTMSDFRPISCCN 357


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 72.4 bits (176), Expect(2) = 2e-24
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
 Frame = +1

Query: 241  NFLLQCVSKILCQRLKLVLPALVNTT*ATFVSGRSLVHNVLICHD---LLRYYNRKQHPN 411
            N + + +SKI+  RLK +L ++V      FV GR +  N LI H+   L++   +  H  
Sbjct: 524  NVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDNCLIAHEVVNLIKQRKKGTHFL 583

Query: 412  AS*RLI*ERHMTW*GWSVLEELLNGFGFPIKFVQLIIMCVTTIKF-------P*KRMVIA 570
            A+ ++   +      W  L  LL   GFP  + Q I+ CVTT+ +       P  R   +
Sbjct: 584  AALKIDMFKAYDKVDWDFLFWLLTQMGFPSFYRQWIMQCVTTVSYSIIVNGEPTTRFKPS 643

Query: 571  MAIVKG*RLKARGSYITLAIVLVM*YLSRILSKMSRLPDFRYHPMCKDQQ-LTHLAFVDD 747
              + +G  L    SY+    +L+M  LSR+L        F+   + +    L+HL F DD
Sbjct: 644  CGLRQGDPL---SSYL---FILIMDVLSRLLIDGVSAGSFQGIKLSRSSPVLSHLFFADD 697

Query: 748  LMIFYKKN*ASVGRIMEALTHFSATTGLEENTEKSNI 858
             +IF+K    +   + + L  FS  +G   N  KS+I
Sbjct: 698  SLIFFKATPTACAGVKDILARFSRLSGEVINYNKSHI 734



 Score = 67.8 bits (164), Expect(2) = 2e-24
 Identities = 37/78 (47%), Positives = 46/78 (58%)
 Frame = +2

Query: 26  NAMFGISPNKNPGLDGYGSGFFRDTSSITGEDITDAVLETLNNGRMLQQLNSTSINLIPK 205
           N +F +   K PG DG  + F++   SI GEDI  AV      G +LQ+ N T+I LIPK
Sbjct: 448 NVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPK 507

Query: 206 ISNTENAGQFRPISCCNV 259
           +   E A QFRPIS CNV
Sbjct: 508 VERPEQACQFRPISLCNV 525