BLASTX nr result
ID: Atropa21_contig00042110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00042110
(504 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339691.1| PREDICTED: probable ATP-dependent RNA helica... 200 2e-49
ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helica... 197 9e-49
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 86 5e-15
gb|EPS69548.1| hypothetical protein M569_05217, partial [Genlise... 84 2e-14
emb|CBI36896.3| unnamed protein product [Vitis vinifera] 77 3e-12
gb|EOY18777.1| RNA helicase family protein [Theobroma cacao] 73 3e-11
gb|EOX95170.1| RNA helicase family protein, putative [Theobroma ... 70 2e-10
ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helica... 66 5e-09
ref|XP_006647859.1| PREDICTED: probable ATP-dependent RNA helica... 65 7e-09
gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays] 65 9e-09
ref|XP_004294749.1| PREDICTED: probable ATP-dependent RNA helica... 64 2e-08
ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [S... 64 2e-08
ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group] g... 64 3e-08
gb|EEE57768.1| hypothetical protein OsJ_08305 [Oryza sativa Japo... 64 3e-08
gb|EAY87444.1| hypothetical protein OsI_08853 [Oryza sativa Indi... 63 5e-08
ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Popu... 62 6e-08
gb|EMT08593.1| Putative ATP-dependent RNA helicase kurz [Aegilop... 62 8e-08
gb|EMS49988.1| putative ATP-dependent RNA helicase kurz [Triticu... 62 8e-08
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP... 60 3e-07
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica... 60 3e-07
>ref|XP_006339691.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Solanum
tuberosum]
Length = 1336
Score = 200 bits (508), Expect = 2e-49
Identities = 99/122 (81%), Positives = 108/122 (88%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SIKTLKKHQIQDD+YSLMWSSRNLGQGET+REKRRRE+QFSRAGLDVPHRDRPVKKRT +
Sbjct: 77 SIKTLKKHQIQDDVYSLMWSSRNLGQGETNREKRRREIQFSRAGLDVPHRDRPVKKRTVD 136
Query: 187 NLSSDVLHDSEELQSSLIVNGNLLLSSMGEGEVSSAAPIAPGSPEELTCQSGLLVCGRDA 8
+LSS+VLHDSEE+Q S IVNGNL SS+GEG V S API PGSP+EL C S LLVC RD
Sbjct: 137 DLSSEVLHDSEEMQLSPIVNGNLWQSSIGEGGVPSDAPITPGSPQELACHSELLVCDRDT 196
Query: 7 SV 2
SV
Sbjct: 197 SV 198
>ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Solanum
lycopersicum]
Length = 1341
Score = 197 bits (502), Expect = 9e-49
Identities = 99/122 (81%), Positives = 109/122 (89%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SIKTLKKHQIQDD+YSLMWSSRNLGQGETSREKRRRE+QFSRAGLDVPHRDRPVKKRT +
Sbjct: 77 SIKTLKKHQIQDDVYSLMWSSRNLGQGETSREKRRREIQFSRAGLDVPHRDRPVKKRTVD 136
Query: 187 NLSSDVLHDSEELQSSLIVNGNLLLSSMGEGEVSSAAPIAPGSPEELTCQSGLLVCGRDA 8
+LSS+VL+DSEE+Q S IVNG+LL SS+GEG V S API PGS +EL C S LLVC RDA
Sbjct: 137 DLSSEVLYDSEEMQLSPIVNGHLLQSSIGEGGVPSDAPITPGSSQELACHSKLLVCDRDA 196
Query: 7 SV 2
SV
Sbjct: 197 SV 198
>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
vinifera]
Length = 1414
Score = 85.9 bits (211), Expect = 5e-15
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SI+TL+K++I++D +SL+ SS+NLGQ ET+ EKRRR V+FS+AGL++PH DRP K +
Sbjct: 158 SIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQ--- 214
Query: 187 NLSSDVLHDSEELQSSL-IVNGNLLLSSMGEGEVSSAAPIAPGSPEELTCQSGLLVCGR 14
++ DS ++QS + + M + EV S A I+ G EL C + L V R
Sbjct: 215 --DGEMEPDSNKIQSKQEFDESDAMWPRMVQREVLSNASISLGFTSELVCSTELAVNSR 271
>gb|EPS69548.1| hypothetical protein M569_05217, partial [Genlisea aurea]
Length = 1130
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/57 (64%), Positives = 50/57 (87%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKR 197
S++ L+K++I+DD+YSLMWSSRNLGQ ET REKRRRE +FS+AGL++P D P+KK+
Sbjct: 26 SMEALEKYRIRDDVYSLMWSSRNLGQVETLREKRRREFEFSKAGLELPESDHPLKKK 82
>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
Length = 1098
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKR--- 197
SI+TL+K++I++D +SL+ SS+NLGQ ET+ EKRRR V+FS+AGL++PH DRP K +
Sbjct: 79 SIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQDGE 138
Query: 196 ---TTNNLSSDVLHDSEELQSSLIVN 128
+N + S D + + L VN
Sbjct: 139 MEPDSNKIQSKQEFDESDAITELAVN 164
>gb|EOY18777.1| RNA helicase family protein [Theobroma cacao]
Length = 1389
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SIKTL+K++I +D YSL+ SS+ +G ET REKRRR VQFS+AGL+ P+ D+ K R N
Sbjct: 149 SIKTLEKYKISEDAYSLLQSSKTIGLAETMREKRRRVVQFSKAGLEPPYVDKSSKGRGGN 208
Query: 187 NLSS 176
N SS
Sbjct: 209 NSSS 212
>gb|EOX95170.1| RNA helicase family protein, putative [Theobroma cacao]
Length = 1264
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SI+TL+K++I +D YSL+ SS+ +G ET REKRRR VQF +AGL++P+ D+ K R +
Sbjct: 79 SIETLEKYKIPEDAYSLLRSSKTIGLAETMREKRRRAVQFLKAGLELPYVDQSSKGRDGD 138
Query: 187 NLSS 176
NLSS
Sbjct: 139 NLSS 142
>ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like
[Brachypodium distachyon]
Length = 1273
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKK 200
SI+ L+KH+I DD Y+L+ +S ++GQ ET +EKRRR VQFS+AGLDVP KK
Sbjct: 61 SIEILRKHRIADDAYALLQTSGSIGQAETMKEKRRRAVQFSKAGLDVPEELSLFKK 116
>ref|XP_006647859.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Oryza
brachyantha]
Length = 1272
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SI+ L+KH+I DD YSL+ +S ++GQ ET +E+RRR VQFS+AG DVP + + K+ +
Sbjct: 57 SIEILRKHKISDDAYSLLHASGSIGQAETLKERRRRAVQFSKAGFDVP-EELSLFKKDGD 115
Query: 187 NLSSDVLHDSEELQSSLIVN 128
+ + SEE+ V+
Sbjct: 116 KIVPENSESSEEISPQKFVD 135
>gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays]
Length = 1287
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKK 200
SI+ L+KH+I +D YSL+ +S +GQ ET +EKRRR VQFS+AGLDVP KK
Sbjct: 66 SIEVLQKHKISEDAYSLLHASGTIGQAETLKEKRRRAVQFSKAGLDVPEELSLFKK 121
>ref|XP_004294749.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Fragaria
vesca subsp. vesca]
Length = 1320
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/122 (30%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SI+ L K+++ + ++SL+ SS+++GQ E+ +E+RR+ V FS+A L+VP+ D+P KK+
Sbjct: 78 SIEALGKYKLPEGVHSLLQSSKDIGQVESKKERRRKAVLFSKARLEVPYTDQPFKKKVDV 137
Query: 187 NLSSDVLHDSEELQSSLIVNGNLLLSSMG-EGEVSSAAPIAPGSPEELTCQSGLLVCGRD 11
+ S+ +SE +S ++ + + SM + E+ A + S + + G + G
Sbjct: 138 DACSESEPESERTRSRQDLDKSGQVQSMVIQKEIHKTASVCLNSSQGIVSSRGHVTDGGP 197
Query: 10 AS 5
A+
Sbjct: 198 AA 199
>ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [Sorghum bicolor]
gi|241934150|gb|EES07295.1| hypothetical protein
SORBIDRAFT_04g028590 [Sorghum bicolor]
Length = 1284
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SI+ L+KH+I +D +SL+ +S +GQ ET +EKRRR VQFS+AGLD+P KK
Sbjct: 66 SIEVLQKHKISEDAHSLLHASGTIGQAETLKEKRRRAVQFSKAGLDIPEELSLFKKNGDT 125
Query: 187 NL--SSDVLHDSEELQSSLIVNGNLLLSS 107
+ +SDV+ E++ S V +L S
Sbjct: 126 KVPENSDVV---EQVSPSKFVEPAPILDS 151
>ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group]
gi|46390441|dbj|BAD15903.1| putative kurz protein [Oryza
sativa Japonica Group] gi|113537586|dbj|BAF09969.1|
Os02g0736600 [Oryza sativa Japonica Group]
gi|215768291|dbj|BAH00520.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 1272
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKK 200
SI+ L+KH+I DD YSL+ +S +GQ ET +EKRRR V FS+AGL+VP +KK
Sbjct: 57 SIEILRKHKISDDAYSLLHASGTIGQAETLKEKRRRAVHFSKAGLNVPEELSLLKK 112
>gb|EEE57768.1| hypothetical protein OsJ_08305 [Oryza sativa Japonica Group]
Length = 926
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKK 200
SI+ L+KH+I DD YSL+ +S +GQ ET +EKRRR V FS+AGL+VP +KK
Sbjct: 57 SIEILRKHKISDDAYSLLHASGTIGQAETLKEKRRRAVHFSKAGLNVPEELSLLKK 112
>gb|EAY87444.1| hypothetical protein OsI_08853 [Oryza sativa Indica Group]
Length = 1260
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKK 200
SI+ L+KH+I DD YSL+ +S +GQ T +EKRRR VQFS+AGL+VP +KK
Sbjct: 57 SIEILRKHKISDDAYSLLHASGTIGQAGTLKEKRRRAVQFSKAGLNVPEELSLLKK 112
>ref|XP_002302733.2| hypothetical protein POPTR_0002s20250g [Populus trichocarpa]
gi|550345446|gb|EEE82006.2| hypothetical protein
POPTR_0002s20250g [Populus trichocarpa]
Length = 1198
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
SI+TL+K++I +D +SL+ SSRN+ + ET +EKRR VQFS+AGL P D+P KR
Sbjct: 34 SIETLEKYKIPEDAFSLLQSSRNISRVETVKEKRRMAVQFSKAGLS-PQGDQPF-KRNHE 91
Query: 187 NLSSDVLHDSEELQSSLIVN 128
S ++ +E+QS +N
Sbjct: 92 TASFEIEAGLDEIQSKKDMN 111
>gb|EMT08593.1| Putative ATP-dependent RNA helicase kurz [Aegilops tauschii]
Length = 1337
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRT 194
SI+TL+KH+I D+ YSL+ +S ++GQ T +EKRRR +Q S+AGLDVP KK +
Sbjct: 113 SIETLQKHRIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNS 170
>gb|EMS49988.1| putative ATP-dependent RNA helicase kurz [Triticum urartu]
Length = 1249
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRT 194
SI+TL+KH+I D+ YSL+ +S ++GQ T +EKRRR +Q S+AGLDVP KK +
Sbjct: 113 SIETLQKHRIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNS 170
>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX37-like [Cucumis sativus]
Length = 1333
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/68 (42%), Positives = 49/68 (72%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
S++TL+K++I DD + L+ SS N+G+ ET EKR R++QFS+ G++VP D+ + K T++
Sbjct: 80 SLETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFSKVGIEVPGNDQQLDK-TSS 138
Query: 187 NLSSDVLH 164
++S H
Sbjct: 139 DISQYESH 146
>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
sativus]
Length = 1333
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/68 (42%), Positives = 49/68 (72%)
Frame = -3
Query: 367 SIKTLKKHQIQDDIYSLMWSSRNLGQGETSREKRRREVQFSRAGLDVPHRDRPVKKRTTN 188
S++TL+K++I DD + L+ SS N+G+ ET EKR R++QFS+ G++VP D+ + K T++
Sbjct: 80 SLETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFSKVGIEVPGNDQQLDK-TSS 138
Query: 187 NLSSDVLH 164
++S H
Sbjct: 139 DISQYESH 146