BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042095
         (659 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                     60   4e-07
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    59   2e-06

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +3

Query: 471  EMKSL*KNDTQELAQLL*IKDHLYAN-ESKLEKDGNDKLIRHKAGLVVKWFEHMQGIDFD 647
            EM SL KN T +L +L   K  L      KL+KDGN KL+R+KA LVVK FE  +GIDFD
Sbjct: 834  EMGSLQKNGTYQLVELPKGKRPLKCKWVFKLKKDGNGKLVRYKARLVVKGFEQKKGIDFD 893

Query: 648  EIFS 659
            EIFS
Sbjct: 894  EIFS 897


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 471  EMKSL*KNDTQELAQLL*IKDHLYAN-ESKLEKDGNDKLIRHKAGLVVKWFEHMQGIDFD 647
            EM+SL KN T +L +L   K  L      KL+KDG+ KL+R+KA LVVK FE  +GIDFD
Sbjct: 833  EMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFD 892

Query: 648  EIFS 659
            EIFS
Sbjct: 893  EIFS 896