BLASTX nr result
ID: Atropa21_contig00041795
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00041795
(529 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 70 3e-10
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 51 2e-07
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 47 8e-07
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] 46 2e-06
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 54 2e-06
emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera] 42 3e-06
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 44 3e-06
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 70.1 bits (170), Expect = 3e-10
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Frame = -2
Query: 483 FSVKAASAHFCSNNEIIKSLPLKLIWRTKLSI*VICFSWTVLI--VL*SETITAKEISSL 310
++VK CS N +I + P KLIWRTKL V+ F+W L L + I ++I
Sbjct: 119 YTVKEGYQQLCSRNPVIANWPWKLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQFP 178
Query: 309 *IGVICVKIMQKL*TICFYIVQ*QNILEHLSIF----GLIWVMPFSLKDACESWSTWKVY 142
+C K + T ++ + E S+F G+ W P ++KDA ESWS WKV
Sbjct: 179 NRCYMCKKEAE---TPRHLLLHCEVASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVD 235
Query: 141 KAIK*I*IMVSAS---NLDI*RNHRFF 70
KAIK I IM+ A ++ + RN R F
Sbjct: 236 KAIKKIWIMIPACIFWSIWLERNKRCF 262
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 50.8 bits (120), Expect(2) = 2e-07
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -1
Query: 388 ISYLFQLDSLNSALIRDNYSKRNIQLVNRCYLCQNNAETLNHLFLHCSITKYSGAPF--- 218
++Y L + + L +N +KR L + CYLC+ ET+NHLFLHC T F
Sbjct: 67 VNYFTWLLAKQAVLTHENLNKRKPNLRSSCYLCEEQVETVNHLFLHCKWTDQLWQMFIQK 126
Query: 217 --DFWTNLGHAIQFKRC 173
WT G I+ +C
Sbjct: 127 RKIKWTKPGSIIEVLQC 143
Score = 29.6 bits (65), Expect(2) = 2e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 486 QFSVKAASAHFCSNNEIIKSLPLKLIWRTKLSI*VICFSW 367
+F+VK+A S E P ++IWRT++ V F+W
Sbjct: 33 EFTVKSAYRELRSTEEQHAGWPWRMIWRTEIPYKVNYFTW 72
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 47.4 bits (111), Expect(2) = 8e-07
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1
Query: 355 SALIRDNYSKRNIQLVNRCYLCQNNAETLNHLFLHCSITK 236
+ L D +R L +RC+LC AET HLFLHCS T+
Sbjct: 408 ACLTHDKLQRRGFHLCSRCFLCHQEAETNGHLFLHCSFTR 447
Score = 31.2 bits (69), Expect(2) = 8e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 483 FSVKAASAHFCSNNEIIKSLPLKLIWRTKLSI*VICFSWTVL 358
FSVK A + + P K IW+ + V+CF+W V+
Sbjct: 364 FSVKIAYNYLMDLEQFNDPWPWKEIWKARAPFKVVCFTWLVV 405
>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
Length = 1848
Score = 45.8 bits (107), Expect(2) = 2e-06
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -1
Query: 388 ISYLFQLDSLNSALIRDNYSKRNIQLVNRCYLCQNNAETLNHLFLHCSITK 236
IS+ + AL D +R L NRCY+C ET++HL LHCS T+
Sbjct: 1695 ISFFAWEAAWGKALTLDLVQRRGWSLANRCYMCMEKEETIDHLLLHCSKTR 1745
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 219 SIFGLIWVMPFSLKDACESWSTWKVYK 139
S+FG+ WVMP S+++ SW T V K
Sbjct: 1753 SLFGVSWVMPCSVRETLLSWQTSSVGK 1779
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = -1
Query: 388 ISYLFQLDSLNSALIRDNYSKRNIQLVNRCYLCQNNAETLNHLFLHCSITK 236
+S L + +AL +DN KR I L +RC+LC +ET+NHLFLHC T+
Sbjct: 267 VSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHLFLHCKFTQ 317
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 483 FSVKAASAHFCSNNEIIKSLPLKLIWRTKLSI*VICFSW 367
F V AA ++ I P + IW+ ++ V CF W
Sbjct: 234 FKVGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIW 272
>emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera]
Length = 2077
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -1
Query: 388 ISYLFQLDSLNSALIRDNYSKRNIQLVNRCYLCQNNAETLNHLFLHCSITK 236
+S+ S L +D +R L NRC LC ET+NH+ +HCS TK
Sbjct: 1924 VSFFAWEASWEKVLTQDQLKRRGWILANRCCLCCVEEETINHILVHCSKTK 1974
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 222 LSIFGLIWVMPFSLKDACESW 160
LS+FG+ WVMPFS++D SW
Sbjct: 1981 LSLFGVNWVMPFSVRDTLLSW 2001
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -1
Query: 388 ISYLFQLDSLNSALIRDNYSKRNIQLVNRCYLCQNNAETLNHLFLHCSITK 236
IS+ + AL D KR L NRC++C E +NHL LHCS T+
Sbjct: 58 ISFFAWEATWGKALTLDLVQKRGWALANRCFMCLEKEENINHLLLHCSRTR 108
Score = 32.3 bits (72), Expect(2) = 3e-06
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -2
Query: 219 SIFGLIWVMPFSLKDACESWS 157
++FG+ WVMPFS++D SW+
Sbjct: 116 ALFGVSWVMPFSVRDTLLSWN 136