BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041752
         (507 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357898.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...    60   3e-10
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    50   6e-08
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    50   2e-07
ref|XP_004253407.1| PREDICTED: uncharacterized protein LOC101250...    59   7e-07
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A...    48   8e-07
gb|ABI34321.1| RNase H family protein [Solanum demissum]               53   3e-06
ref|XP_004253276.1| PREDICTED: putative ribonuclease H protein A...    52   5e-06
ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein A...    55   7e-06
ref|XP_004253435.1| PREDICTED: putative ribonuclease H protein A...    52   8e-06
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    50   1e-05

>ref|XP_006357898.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5-like
           [Solanum tuberosum]
          Length = 572

 Score = 60.5 bits (145), Expect(2) = 3e-10
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDVDCE 326
           E Q AL G  WC +    +  LE+ SL++VNMI GL    W L + + KIQ+ +      
Sbjct: 64  EAQTALQGTLWCCNQHCHNYTLELDSLLIVNMILGLDNILWKLQEIIKKIQKNVELHGIT 123

Query: 325 VRHCFREANAVTDS 284
           V+HC++E N V DS
Sbjct: 124 VQHCYKEGNTVADS 137



 Score = 29.6 bits (65), Expect(2) = 3e-10
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 288 TLAKYATIGDINEICFREDDMPDSTRG 208
           +LAKYAT    NE+  +EDD+P   +G
Sbjct: 137 SLAKYATNITNNEVFLQEDDLPQEIKG 163


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 49.7 bits (117), Expect(2) = 6e-08
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKI-RDVDC 329
           E++AA +G+ W  D    +IILE+ S +VV  I       W+++  L+KIQQ I R    
Sbjct: 192 EMEAAQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKF 251

Query: 328 EVRHCFREANAVTDS 284
           +  H FREAN   DS
Sbjct: 252 KCEHIFREANWTADS 266



 Score = 32.7 bits (73), Expect(2) = 6e-08
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 252 EICFREDDMPDSTRGPLRMDMLNLVSFRFKKGKHSGWHYEPP 127
           ++ F  + MP   +   RMD++N+ SFR KK K     +EPP
Sbjct: 278 QLYFNNNQMPKEAQAYYRMDLMNMPSFRRKKTKKI---FEPP 316


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDV-DC 329
           E  AAL+G+ W  +    +I++E+ S +VV  I     P W++ K +++IQ  I    + 
Sbjct: 184 ETAAALFGLSWALELGYRNILIELDSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQNF 243

Query: 328 EVRHCFREANAVTDS 284
           +  H FREAN V DS
Sbjct: 244 KCTHIFREANWVADS 258



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = -1

Query: 288 TLAKYATIGDINEICFREDDMPDSTRGPLRMDMLNLVSFRFKKGKHSGWHYEPP 127
           +L+K++      ++ F    +P   +   +MD+LN+ SFR KK K     ++PP
Sbjct: 258 SLSKHSHNTTAPQVYFSSTQLPKEAQAYYQMDLLNMPSFRRKKTKKI---FDPP 308


>ref|XP_004253407.1| PREDICTED: uncharacterized protein LOC101250876, partial [Solanum
           lycopersicum]
          Length = 445

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDVD-C 329
           E++AALYG+EWC  +    + LE+ S ++ N I+ +IQ  W     + +IQ  IR +D  
Sbjct: 321 EIKAALYGLEWCEQHGYKRVELEVDSELLCNWIKNIIQIPWRYEDLVQQIQHIIRKMDYF 380

Query: 328 EVRHCFREANAVTDSC*IRYNWRH**NLLQ 239
           +  H +REAN+  D   +   W H   L+Q
Sbjct: 381 QCHHIYREANSTAD---LLSKWSHGLELVQ 407


>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score = 48.1 bits (113), Expect(2) = 8e-07
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDV-DC 329
           E++A L+G+ W  +    +I+LE+ S +VV  I   I P W+    L+++   I    + 
Sbjct: 57  EIEATLFGMTWALELGFKNILLELDSQLVVQWISNKIAPQWSFTNQLERLHHIIMQTQNF 116

Query: 328 EVRHCFREANAVTDS 284
           +  H FREAN V D+
Sbjct: 117 KCSHIFREANWVADA 131



 Score = 30.4 bits (67), Expect(2) = 8e-07
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -1

Query: 285 LAKYATIGDINEICFREDDMPDSTRGPLRMDMLNLVSFRFKKGKHSGWHYEPP 127
           L+K++      ++ F  + +P   +   +MD+LN+ SFR KK K     ++PP
Sbjct: 132 LSKHSHNTTAPQVYFNSNQLPKEAQAYYQMDLLNMPSFRRKKTK---MIFDPP 181


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 53.1 bits (126), Expect(2) = 3e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)
 Frame = -3

Query: 505  ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDVDCE 326
            E  AA +GI WC      +  LE+ S +VV+M++     +  +   ++ I Q +  ++CE
Sbjct: 798  EALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCE 857

Query: 325  VRHCFREANAVTDS 284
            V HC+REAN V D+
Sbjct: 858  VNHCYREANQVADA 871



 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 285  LAKYATIGDINEICFREDDMPDSTRGPLRMDMLNLVSFRFKKGKHSGWHY 136
            LAK+A I +   +     D+P    G  ++D + + S R +  K + + Y
Sbjct: 872  LAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIRYDKSNFFKY 921


>ref|XP_004253276.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 174

 Score = 52.4 bits (124), Expect(2) = 5e-06
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQ---KIRDV 335
           EL+AA YG+EWC  +    I LE+ S ++ N I  +I   W    T+ +I Q   K+   
Sbjct: 50  ELKAASYGLEWCQQHGYKRIALEVDSELLCNWINNIINTPWRCYPTIQQILQIKSKLEYF 109

Query: 334 DCEVRHCFREANAVTD 287
            C  +H FREAN   D
Sbjct: 110 HC--KHIFREANCTAD 123



 Score = 23.5 bits (49), Expect(2) = 5e-06
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -1

Query: 285 LAKYATIGDINEICFREDDMPDSTRGPLRMDMLNLVSFRFKKGK 154
           LAK++   DI +  +  + +  + RG   ++ + + +FR +K K
Sbjct: 125 LAKWSYTSDIPQHFYTSNQLKGAIRGSYILEKMGIQNFRRRKLK 168


>ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDVD-C 329
           EL+AA +GIEWC  +   +I LE+ S M+   I  +I+P W   +T+ ++ Q I  +   
Sbjct: 57  ELKAATFGIEWCEQHGYKNIELEVDSEMICQWINNIIKPPWRCQQTVQQLLQTISKLQYF 116

Query: 328 EVRHCFREANAVTDSC*IRYNWRH 257
             +H +REAN   D   +   W H
Sbjct: 117 HCKHIYREANNTAD---LLVKWSH 137


>ref|XP_004253435.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 174

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQ---KIRDV 335
           EL+AA YG+EWC  +    I LE+ S ++ N I  +I   W    T+ +I Q   K+   
Sbjct: 50  ELKAASYGLEWCQQHGYKRIALEVDSELLCNWINNIINTPWRCYPTIQQILQIKSKLEYF 109

Query: 334 DCEVRHCFREANAVTD 287
            C   H FREAN   D
Sbjct: 110 HC--NHIFREANCTAD 123



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -1

Query: 285 LAKYATIGDINEICFREDDMPDSTRGPLRMDMLNLVSFRFKKGK 154
           LAK++   DI +  +  + +  + RG   ++ + + +FR +K K
Sbjct: 125 LAKWSYTSDIPQHFYTSNQLKGAIRGSYILEKMGIQNFRRRKLK 168


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score = 49.7 bits (117), Expect(2) = 1e-05
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = -3

Query: 505 ELQAALYGIEWCHDNSNFHIILEMVSLMVVNMIQGLIQPSWTLNKTLDKIQQKIRDV-DC 329
           E +AAL+G+ W  +  + +I++E+ S +VV  I     P W +   +++IQQ I    + 
Sbjct: 547 EAEAALFGLSWALELGHRNILIELDSQLVVQWISKKEPPHWNVINQIERIQQLIMQTQNF 606

Query: 328 EVRHCFREANAVTDS 284
           +  H FREAN V D+
Sbjct: 607 KCNHIFREANWVADA 621



 Score = 25.0 bits (53), Expect(2) = 1e-05
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 285 LAKYATIGDINEICFREDDMPDSTRGPLRMDMLNLVSFRFKKGK 154
           L+K++      ++ F    +P   +   +MD+ N+ +FR KK K
Sbjct: 622 LSKHSHTIATPQVYFSNSQLPREAQAYYQMDLQNMPNFRRKKTK 665