BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041663
         (1314 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...   226   2e-56
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]    88   4e-35
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]    90   8e-35
emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera]    76   2e-34
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   133   5e-30
ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259...   136   2e-29
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260...   134   6e-29
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            123   9e-27
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   122   1e-25
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   115   4e-25
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   122   4e-25
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   120   6e-25
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   119   8e-25
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   119   2e-24
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   119   2e-24
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   115   3e-24
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   118   3e-24
ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244...   117   4e-24
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   117   6e-24
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   116   8e-24

>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score =  226 bits (575), Expect = 2e-56
 Identities = 134/277 (48%), Positives = 175/277 (63%), Gaps = 5/277 (1%)
 Frame = -2

Query: 1202 HKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDC 1023
            +K  F CDI PMARQ K PF +S I +K  F +IHIDT GPY   TY GE+YFLTIVDD 
Sbjct: 40   NKQTFPCDICPMARQSKPPFPSSTIKSKQCFELIHIDTWGPYNVPTYKGERYFLTIVDDF 99

Query: 1022 TRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL 843
            +R TWT+L++TKSN F  LKS L+ ++RQFS K+K+IRS+NAYELGS  IP++F  S  +
Sbjct: 100  SRATWTYLLTTKSNAFATLKSLLSLIERQFSSKVKIIRSDNAYELGSGVIPSEFLASLGI 159

Query: 842  *TKPLV*PPYNRMGWLRGNTIISLRSVR-LYYINHIFLPSIGRSFAN-NNLFDQYLSI*S 669
              +        + G +       L + R L Y +H+     G        L +++ S   
Sbjct: 160  IHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLINRFPSKVL 219

Query: 668  SGIVP---LINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRKKGYKV 498
            +G  P   L  SL      LK   SL FVS L+ H DKL PRAIP VFLG+ F +KGYKV
Sbjct: 220  NGKCPYQVLFGSLPD-YSHLKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKGYKV 278

Query: 497  LSLKTRELLISRNVKFFESIFSFTKTFPMSQLFPGSF 387
            L+L+T ++++SR+VKFFESIF F+ + PMS+LFP SF
Sbjct: 279  LNLQTSQVIVSRDVKFFESIFPFSYSLPMSKLFPASF 315



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -3

Query: 241 TVNSPQVSPF-SDPIIQPPSPQTPMDMLPQEQEVRRSTRKSIFPSYLSDFICSNASTCLS 65
           ++ SP  S   S P+  P    +P  + P  Q +RR  R    P+YLSDF+C    T +S
Sbjct: 344 SIQSPGPSQVPSSPLCTPSPFPSPSAVSPPVQGLRRGARTKAPPAYLSDFVCDTTYTVIS 403

Query: 64  PNPPDFTLHSFAYAFLSKHNQ 2
           PNPP    HS+A+   S HNQ
Sbjct: 404 PNPPVIPFHSYAFTTFSTHNQ 424


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score = 88.2 bits (217), Expect(4) = 4e-35
 Identities = 46/108 (42%), Positives = 65/108 (60%)
 Frame = -2

Query: 1223 RNSGQRSHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYF 1044
            RN G    KN F CDI   A+Q +  F +S    K+ F +IH D  G Y+     G  YF
Sbjct: 347  RNDGX---KNKF-CDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPASCGGIYF 402

Query: 1043 LTIVDDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNN 900
            LTIVDDC+R  W +L++ K+ V  +LK+F+  V +QF K +K++RS+N
Sbjct: 403  LTIVDDCSRAVWIYLLNRKNEVACVLKNFIVMVRQQFEKNVKIVRSDN 450



 Score = 58.5 bits (140), Expect(4) = 4e-35
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = -1

Query: 846 IINQTTCVATLQQNGMAERKHNHLLEICKALLYQSHLPTKYWEK--LC*QQPI*SISFHL 673
           I++QT+CV   Q NG  ERKH H+L + +AL +Q+HLP ++W +  L  +  I       
Sbjct: 466 ILHQTSCVGXPQXNGHVERKHRHILNVVRALRFQAHLPIEFWGECVLIARYLINXTPSVF 525

Query: 672 KFWDSPFDKLFGKAPNYSQAWP*FVFCF 589
               +P++ L+G+AP+Y         C+
Sbjct: 526 LDGKTPYEILYGQAPSYKHIXTFGCLCY 553



 Score = 48.5 bits (114), Expect(4) = 4e-35
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = -2

Query: 569 DKLAPRAIPCVFLGFSFRKKGYKVLSLKTRELLISRNVKFFESIFSFTKTFPMSQL 402
           DK A R+  C+F+G+ F KKG+++  L++ E  +SR+V F E+ FS+      S L
Sbjct: 562 DKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFVSRBVIFVEAEFSYFNNVVNSSL 617



 Score = 21.9 bits (45), Expect(4) = 4e-35
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 1285 SNKLWHYRLGH 1253
            S +LWH R+GH
Sbjct: 320  SYELWHRRMGH 330


>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
          Length = 1472

 Score = 90.1 bits (222), Expect(4) = 8e-35
 Identities = 47/108 (43%), Positives = 64/108 (59%)
 Frame = -2

Query: 1205 SHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDD 1026
            S +++ +C I P+A+Q +LPF  S I++  PF IIH    G Y+  +  G  YFLTIVDD
Sbjct: 530  SVQSNNACPICPLAKQSRLPFGTSAISSTKPFEIIHCHIWGRYQHPSLFGAHYFLTIVDD 589

Query: 1025 CTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGS 882
             TR TW FL+  K    ++LK F +YV  QF   IK  R++N  E  S
Sbjct: 590  YTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFCIKTFRNDNGREFTS 637



 Score = 55.1 bits (131), Expect(4) = 8e-35
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
 Frame = -1

Query: 846 IINQTTCVATLQQNGMAERKHNHLLEICKALLYQSHLPTKYWEKLC*QQPI*SISFHLKF 667
           +I Q + V T QQNG+ ERKH H+L++ +AL + + +PT++W +          + H+  
Sbjct: 647 VIFQHSYVYTPQQNGVVERKHRHILQVTRALKFHAQVPTQFWGECA------LTAVHIIN 700

Query: 666 W--------DSPFDKLFGKAPNYS 619
           W         +PF+ L+ K P+YS
Sbjct: 701 WLPSPVLSFKTPFELLYSKPPSYS 724



 Score = 45.8 bits (107), Expect(4) = 8e-35
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = -2

Query: 599 YFVSILSAHMDKLAPRAIPCVFLGFSFRKKGYKVLSLKTRELLISRNVKFFESIFSFTKT 420
           Y  ++ ++H  K   RA+  +F+G+   +K YK+  L T+++  SR+VKF E IF +   
Sbjct: 734 YATNVHTSH--KFDYRAMSSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPYVSL 791

Query: 419 FPMSQL 402
            P S L
Sbjct: 792 KPNSTL 797



 Score = 25.0 bits (53), Expect(4) = 8e-35
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 1285 SNKLWHYRLGHLPLSSAKYI 1226
            S  LWH RLGH+  S   +I
Sbjct: 503  STDLWHSRLGHVSPSRLSFI 522


>emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera]
          Length = 835

 Score = 76.3 bits (186), Expect(4) = 2e-34
 Identities = 37/116 (31%), Positives = 66/116 (56%)
 Frame = -2

Query: 1196 NDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTR 1017
            ++F C+   + +  ++ F  S   +  PFH+IH D  GP         ++F++++DDCT+
Sbjct: 59   SEFHCETCELVKHTRVSFPISNKRSSHPFHLIHSDIWGPSTIPNVSEARWFVSLIDDCTQ 118

Query: 1016 TTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQ 849
             TW FL+  K +V  ++ +F + V  QF  KIK  R++NA +  ++ I + +F SQ
Sbjct: 119  VTWIFLLKQKYDVTIVIPNFHSMVQNQFXVKIKSFRTDNARDYFNQ-ILSPYFQSQ 173



 Score = 54.3 bits (129), Expect(4) = 2e-34
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = -1

Query: 846 IINQTTCVATLQQNGMAERKHNHLLEICKALLYQSHLPTKYW 721
           I++ ++CV T QQNG+AERK+ HLL   +ALL+Q ++P  YW
Sbjct: 175 ILHDSSCVNTXQQNGVAERKNGHLLNTTRALLFQGNVPKSYW 216



 Score = 53.5 bits (127), Expect(4) = 2e-34
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = -2

Query: 596 FVSILSAHMDKLAPRAIPCVFLGFSFRKKGYKVLSLKTRELLISRNVKFFESIFSFTKTF 417
           FV +   H DKL PRAI C F G+S  +KGYK  +  TR+  IS +V F E+   F K+ 
Sbjct: 267 FVHVHXQHRDKLDPRAIKCXFXGYSSTQKGYKCYNPSTRKFYISADVTFIENKPFFHKSS 326

Query: 416 ---PMSQLFPGSFQSQ*PIILPSIT 351
               +S +    + S  P+ LP ++
Sbjct: 327 LQGEISMMEDSPYXSFEPLDLPHVS 351



 Score = 30.4 bits (67), Expect(4) = 2e-34
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -3

Query: 721 GEALLTTTYLINIFPSKVL 665
           GEA+LT TY+IN  PS+VL
Sbjct: 217 GEAVLTATYMINRIPSRVL 235


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  133 bits (334), Expect(2) = 5e-30
 Identities = 97/286 (33%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
 Frame = -2

Query: 1184 CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWT 1005
            C I P A+Q +LPF  S ITTK PF ++H D  GP+K   + G +YFLTIVDD +R TW 
Sbjct: 800  CPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWI 859

Query: 1004 FLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQK---L*TK 834
            FL+  KS   ++L +F+ +V  QF   ++ +R +N    G++ IP   F   K   L T 
Sbjct: 860  FLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDN----GTEFIPLRIFLQNKGIELQTS 915

Query: 833  PLV*PPYNRMGWLRGNTIISL-------RSVRLYYINHIFLPSIGRSFANNNLFDQYLSI 675
             +  P  N +   +   I+++        +V L +     L ++   +  N +    LS 
Sbjct: 916  CIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAV---YLINRIPTPLLSN 972

Query: 674  *SSGIVPLINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRKKGYKVL 495
              S    L N    L  +   G   Y  ++      K  PRA  CVFLG+   KKGYKVL
Sbjct: 973  -KSPFEVLYNRPPSLTHLRVFGCECYVTNV--HPKQKFDPRASICVFLGYPHGKKGYKVL 1029

Query: 494  SLKTRELLISRNVKFFESIFSFTKTFPMSQLFPGSFQSQ*PIILPS 357
             L+T+++ +SR+V F E+IF F  +   SQ    S     PI   S
Sbjct: 1030 DLQTQKISVSRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISFDS 1075



 Score = 26.2 bits (56), Expect(2) = 5e-30
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 1312 KDTISYFFYSNKLWHYRLGHLPLSSAKYIKEIPVNAH 1202
            K  + +    + LWH RLGH   S  K +  +  + H
Sbjct: 757  KSVVFHVSQPSDLWHLRLGHPSFSRFKLLSRLLPDIH 793


>ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum
            lycopersicum]
          Length = 1105

 Score =  136 bits (343), Expect = 2e-29
 Identities = 98/287 (34%), Positives = 145/287 (50%), Gaps = 18/287 (6%)
 Frame = -2

Query: 1205 SHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDD 1026
            S +  F+C I PMARQ +LPFT+S   +K  F ++H++  GPY   TY   +YF+T+VDD
Sbjct: 620  SARQPFTCTICPMARQTRLPFTHSTTHSKSIFDLLHVNLWGPYHVPTYNNCRYFITLVDD 679

Query: 1025 CTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQK 846
             +R TWT+L+STKSN   +L++F+  ++ QF   +K IRS+N  E  +  I    FF  K
Sbjct: 680  YSRATWTYLLSTKSNAIQVLQTFINMIENQFQTNVKCIRSDNGLEFNNNEILR--FFQAK 737

Query: 845  L*TKPLV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRSFA-NNNLFDQYLSI*S 669
              T      PY      + N+I+  +        H +L    R+    + L  +Y     
Sbjct: 738  GITHQKS-CPYTP----QQNSIVERK--------HRYLLETARALLFQSKLPTKYWGDCI 784

Query: 668  SGIVPLINSLE----------KLLIILKPGRS-------LYFVSILSAHMDKLAPRAIPC 540
                 LIN +           ++L   KP  S       L + ++   H DKL PR  P 
Sbjct: 785  LTSTYLINRIPSTFLQNKCPYEMLYKEKPKYSQLRSFGCLCYPTLPKVHRDKL-PRTTPH 843

Query: 539  VFLGFSFRKKGYKVLSLKTRELLISRNVKFFESIFSFTKTFPMSQLF 399
            +F+G+    KGYKV+SL T ++ ISR+V F E IF F+ +   S  F
Sbjct: 844  IFIGYPSGIKGYKVMSLATSKIQISRDVIFHEDIFPFSFSSDNSNFF 890


>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
            lycopersicum]
          Length = 924

 Score =  134 bits (338), Expect = 6e-29
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
 Frame = -2

Query: 1205 SHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDD 1026
            S+K  F+C I PMARQ ++PF  S   T   F ++ +D  GPY   T+ G  YFLT+VDD
Sbjct: 460  SNKQPFTCTICPMARQTRMPFPESVTATSSIFELLRVDLWGPYNVPTHDGYHYFLTMVDD 519

Query: 1025 CTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQK 846
             +R TWT  +  KSN    +K+F++ ++ QF  ++K IRS+N  E  S    T FF  + 
Sbjct: 520  YSRATWTQFLRCKSNALHTIKAFISLIENQFHTRLKTIRSDNGLEFSSTE-ATCFFQEKS 578

Query: 845  L*TKPLV*PPYNRMGWLRGNTIISLRSVRL----------YYINHIFLPSIGRSFANNNL 696
            +  +        + G +       L + R           Y++  +    +  ++  N L
Sbjct: 579  IIHQQSCPCTQQQNGLVERKHKYLLETARALLFQSKMPMRYWVECV----LTATYLINRL 634

Query: 695  FDQYLSI*SSGIVPLINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFR 516
              + L         L+   +     L+    L F + L  H DK  PR +P +F+G+ F 
Sbjct: 635  PTKLLQ--GKSPYELLYQKKPFYSHLRNFGCLCFPTTLKTHKDKFEPRTMPHIFIGYPFN 692

Query: 515  KKGYKVLSLKTRELLISRNVKFFESIFSF 429
             KGYKVL+  T+ + +SR+V F+E++  F
Sbjct: 693  TKGYKVLNWDTKRIHVSRDVLFYETVLPF 721


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  123 bits (309), Expect(2) = 9e-27
 Identities = 89/259 (34%), Positives = 125/259 (48%), Gaps = 6/259 (2%)
 Frame = -2

Query: 1187 SCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTW 1008
            SC I P+A+Q +LPF  S     + F +IH D  GPYK  T+ G +YFLT+VDDC+R  W
Sbjct: 295  SCPICPLAKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDGNRYFLTLVDDCSRMIW 354

Query: 1007 TFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL*TKPL 828
             FL+  KS+VF +LK FL  + RQF   IK+ RS+N  E  + +    F  +  +     
Sbjct: 355  IFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSDNGTEFFNSHCSELFRTAGIVHQSSC 414

Query: 827  V-*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRSFANNN---LFDQYLSI*SSGI 660
            V  P  N +   R   I+ +     +  N   LP         N   L ++  S   SG 
Sbjct: 415  VYTPQQNGVVERRHRQILEVARAIRFQAN---LPIRFWGLCVQNAVYLINRIPSTALSGR 471

Query: 659  VP--LINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRKKGYKVLSLK 486
             P  +    E  L  L+    L +      H DK   R+I  V +G+S  +KGYK+  L 
Sbjct: 472  SPFAVFFGKEPSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLYDLS 531

Query: 485  TRELLISRNVKFFESIFSF 429
            T+   ISR+V F E  + F
Sbjct: 532  TQTFFISRDVTFREDQYPF 550



 Score = 25.0 bits (53), Expect(2) = 9e-27
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 1276 LWHYRLGHLP 1247
            LWH RLGH+P
Sbjct: 266  LWHRRLGHIP 275


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  122 bits (306), Expect(2) = 1e-25
 Identities = 89/267 (33%), Positives = 137/267 (51%), Gaps = 7/267 (2%)
 Frame = -2

Query: 1214 GQRSHKNDFS--CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFL 1041
            G   HKN  S  C +  +A+Q KL F ++       F ++HID  GP+  +T  G KYFL
Sbjct: 589  GTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFL 648

Query: 1040 TIVDDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDF 861
            TIVDD +R TW +L+ +KS+V T+  +F+  V+ Q+  ++K +RS+NA EL      T+F
Sbjct: 649  TIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAF----TEF 704

Query: 860  FFSQKL*T--KPLV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRSFANN-NLFD 690
            + ++ + +       P  N +   +   I+++    ++  N + LP  G        L +
Sbjct: 705  YKAKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSN-MSLPYWGDCVLTAVFLIN 763

Query: 689  QYLSI*SSGIVPLINSLEKL--LIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFR 516
            +  S   S   P      KL     LK    L + S  S    K  PR+  CVFLG+ F 
Sbjct: 764  RTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFG 823

Query: 515  KKGYKVLSLKTRELLISRNVKFFESIF 435
             KGYK+L L++  + ISRNV+F E +F
Sbjct: 824  FKGYKLLDLESNVVHISRNVEFHEELF 850



 Score = 22.3 bits (46), Expect(2) = 1e-25
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 1276 LWHYRLGHLPLSSAKYIKEI 1217
            +WH RLGH   S    + E+
Sbjct: 568  VWHKRLGHPSFSRLDSLSEV 587


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  115 bits (288), Expect(2) = 4e-25
 Identities = 87/274 (31%), Positives = 126/274 (45%), Gaps = 12/274 (4%)
 Frame = -2

Query: 1220 NSGQRSHK--NDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKY 1047
            NS   S K  ++  C I P+A+Q KLPF  S   +   F ++H +  GP+   +Y    +
Sbjct: 525  NSSDSSXKXIHNKVCXICPLAKQKKLPFPISNSQSNKAFQLVHXBIWGPFSIPSYSXYXF 584

Query: 1046 FLTIVDDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPT 867
            FLT VDD TR TW FL+ TK+    IL +FLAYV   F+  I+ + S+N  E    N+PT
Sbjct: 585  FLTXVDDFTRFTWLFLMKTKTETXAILTNFLAYVHTHFNTNIQTLXSDNGQEF---NMPT 641

Query: 866  DFFFSQKL*TKPLV*PPYNRMGWLRGNTIISLRSVRLYYI--NHIFLPSIGRSFANNNLF 693
             +     +     V  P         N  +  +   L  +  + +F   +  S+  + + 
Sbjct: 642  FYQEHGIIHQLSCVETPXQ-------NGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVL 694

Query: 692  DQYLSI*SSGIVPLINSLEKLLIILKPGRSLY--------FVSILSAHMDKLAPRAIPCV 537
                 I  +    L N     L+  KP    Y        F S ++ +  K  PRA  C+
Sbjct: 695  TXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCI 754

Query: 536  FLGFSFRKKGYKVLSLKTRELLISRNVKFFESIF 435
            FLG+    KGYKVL L T +  +SRNV F ES F
Sbjct: 755  FLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTF 788



 Score = 27.7 bits (60), Expect(2) = 4e-25
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 1285 SNKLWHYRLGHLPLSSAKYI 1226
            ++ LWH+RLGH+P +  + I
Sbjct: 505  NSDLWHFRLGHIPNAKIQLI 524


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  122 bits (305), Expect = 4e-25
 Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 19/284 (6%)
 Frame = -2

Query: 1184 CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWT 1005
            C I P+A+Q +L + +       PF +IH+D  GP+  ++  G +YFLT+VDDCTRTTW 
Sbjct: 532  CRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWV 591

Query: 1004 FLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL*TKPLV 825
            +++  KS V  I   F+  +  Q++ KIK IRS+N  EL      T F   Q +  +   
Sbjct: 592  YMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELAF----TKFVKEQGMIHQ--- 644

Query: 824  *PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRSFA-NNNLFDQYLSI*SSGIVPLI 648
               ++     + N+++  +        H  L +I RS    +N+  QY S        LI
Sbjct: 645  ---FSCAYTPQQNSVVERK--------HQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLI 693

Query: 647  NSLEKLL--------IILKP-------GRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRK 513
            N L   L        ++LK           L + S      +K +PRA PCVFLG+    
Sbjct: 694  NRLPSPLLDNKTPFELLLKKIPDYTLLKSCLCYASTNVHDRNKFSPRARPCVFLGYPSGY 753

Query: 512  KGYKVLSLKTRELLISRNVKFFESIFSFTKTFPMSQ---LFPGS 390
            KGYKVL L++  + I+RNV F E+ F F  +  + +   +FP S
Sbjct: 754  KGYKVLDLESHSISITRNVVFHETKFPFKTSKFLKESVDMFPNS 797


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  120 bits (301), Expect(2) = 6e-25
 Identities = 87/275 (31%), Positives = 135/275 (49%), Gaps = 11/275 (4%)
 Frame = -2

Query: 1214 GQRSHKNDFS--CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFL 1041
            G   HKN  S  C +  +A+Q KL F  S    K+ F ++HID  GP+  +T  G KYFL
Sbjct: 578  GTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFL 637

Query: 1040 TIVDDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDF 861
            TIVDD +R TW +L+ TKS V T+  +F+  V+ Q+  K+K +RS+NA EL   +     
Sbjct: 638  TIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFTS----- 692

Query: 860  FFSQK----L*TKPLV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIG-----RSFA 708
            F+++K      + P   P  N +   +   I+++    L + + + L   G       F 
Sbjct: 693  FYAEKGIVSFHSCPET-PEQNSVVERKHQHILNVARA-LMFQSQVPLSLWGDCVLTAVFL 750

Query: 707  NNNLFDQYLSI*SSGIVPLINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLG 528
             N    Q L   +     ++     +   L+    L + S       K  PR+  C+FLG
Sbjct: 751  INRTPSQLLM--NKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLG 808

Query: 527  FSFRKKGYKVLSLKTRELLISRNVKFFESIFSFTK 423
            +    KGYK++ L++  + ISRNV+F E +F   K
Sbjct: 809  YPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAK 843



 Score = 21.9 bits (45), Expect(2) = 6e-25
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 1276 LWHYRLGHLPLSSAKYIKE 1220
            +WH RLGH  L     I +
Sbjct: 557  MWHRRLGHASLQRLDAISD 575


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  119 bits (298), Expect(2) = 8e-25
 Identities = 101/326 (30%), Positives = 154/326 (47%), Gaps = 16/326 (4%)
 Frame = -2

Query: 1202 HKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDC 1023
            H N+ +C I P+A+Q +LPF  S I++  PF IIH D  G Y+  +  G  YFLTIVDD 
Sbjct: 544  HSNN-ACPICPLAKQSRLPFGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDY 602

Query: 1022 TRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL 843
            TR TW FL+  K    ++LK F +YV  QF  +IK  RS+N  E  S  + + F  +  +
Sbjct: 603  TRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFRIKTFRSDNXXEFTS--LRSFFQDNGVI 660

Query: 842  *TKPLV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRSFANNNLFDQYLSI*SSG 663
                 V  P       + N ++  +        HI   +    F +  +  Q+    +  
Sbjct: 661  FQHSCVYTP-------QQNGVVERKH------RHILQVARALKF-HAQVPTQFWGECALT 706

Query: 662  IVPLINSLEKLLIILK-PGRSLYFVSILSAHM---------------DKLAPRAIPCVFL 531
             V +IN L   ++  K P   LY  S   +H+                K   RA+P +F+
Sbjct: 707  AVHIINRLXSPILSFKTPFELLYLKSPXYSHLRVFGCLAYATNVHTSHKFDYRAMPSIFI 766

Query: 530  GFSFRKKGYKVLSLKTRELLISRNVKFFESIFSFTKTFPMSQLFPGSFQSQ*PIILPSIT 351
            G+   +K YK+  L T+++  SR+VKF E IF +    P   L P    +  PI L +  
Sbjct: 767  GYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPYVSLKPNXTL-PSLTHNSGPIPLVA-- 823

Query: 350  *YSITTYFQFYTSFSLTYTLSEFTTS 273
             + I++ F   TS +L+  LS  T++
Sbjct: 824  -HDISSSFD-STSHALSPLLSNHTST 847



 Score = 22.7 bits (47), Expect(2) = 8e-25
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 1285 SNKLWHYRLGH 1253
            S  LWH RLGH
Sbjct: 534  STDLWHSRLGH 544


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  119 bits (297), Expect(2) = 2e-24
 Identities = 82/268 (30%), Positives = 139/268 (51%), Gaps = 5/268 (1%)
 Frame = -2

Query: 1217 SGQRSHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLT 1038
            SG     +  SCD+   A+Q +  F +S   + D F +IH D  GPY+  +  G  YFLT
Sbjct: 532  SGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLT 591

Query: 1037 IVDDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFF 858
            IVDD +R+ WT+L+  KS V ++L +FLAY ++QF K +K+IRS+N  E       + +F
Sbjct: 592  IVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEF---MCLSSYF 648

Query: 857  FSQKL--*TKPLV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRS-FANNNLFDQ 687
              Q +   T  +  P  N     +   I+++    L+  + + +   G +      L ++
Sbjct: 649  KEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQAS-LPIKFWGEAVMTAAYLINR 707

Query: 686  YLSI*SSGIVP--LINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRK 513
              S   +G+ P  L++  +     L+   S  +   ++   DK   R+  C+F+G+ F +
Sbjct: 708  TPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQ 767

Query: 512  KGYKVLSLKTRELLISRNVKFFESIFSF 429
            KG+KV  L T E ++SR+V F E++F +
Sbjct: 768  KGWKVYDLSTNEFIVSRDVVFRENVFPY 795



 Score = 21.9 bits (45), Expect(2) = 2e-24
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1276 LWHYRLGH 1253
            LWH RLGH
Sbjct: 512  LWHQRLGH 519


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  119 bits (297), Expect(2) = 2e-24
 Identities = 82/268 (30%), Positives = 139/268 (51%), Gaps = 5/268 (1%)
 Frame = -2

Query: 1217 SGQRSHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLT 1038
            SG     +  SCD+   A+Q +  F +S   + D F +IH D  GPY+  +  G  YFLT
Sbjct: 532  SGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLT 591

Query: 1037 IVDDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFF 858
            IVDD +R+ WT+L+  KS V ++L +FLAY ++QF K +K+IRS+N  E       + +F
Sbjct: 592  IVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEF---MCLSSYF 648

Query: 857  FSQKL--*TKPLV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRS-FANNNLFDQ 687
              Q +   T  +  P  N     +   I+++    L+  + + +   G +      L ++
Sbjct: 649  KEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQAS-LPIKFWGEAVMTAAYLINR 707

Query: 686  YLSI*SSGIVP--LINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRK 513
              S   +G+ P  L++  +     L+   S  +   ++   DK   R+  C+F+G+ F +
Sbjct: 708  TPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQ 767

Query: 512  KGYKVLSLKTRELLISRNVKFFESIFSF 429
            KG+KV  L T E ++SR+V F E++F +
Sbjct: 768  KGWKVYDLSTNEFIVSRDVVFRENVFPY 795



 Score = 21.9 bits (45), Expect(2) = 2e-24
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1276 LWHYRLGH 1253
            LWH RLGH
Sbjct: 512  LWHQRLGH 519


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  115 bits (287), Expect(2) = 3e-24
 Identities = 89/282 (31%), Positives = 130/282 (46%), Gaps = 21/282 (7%)
 Frame = -2

Query: 1184 CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWT 1005
            C I  +A+Q +LPF  S+I+++ PF +IH D  G YK  +  G  YFLTIVDD TR TW 
Sbjct: 578  CPICLLAKQHRLPFGTSEISSEKPFDLIHCDIWGRYKHSSLSGAHYFLTIVDDYTRFTWI 637

Query: 1004 FLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQK--L*TKP 831
            FL+  K     ++K F +YV  QF+  IK+ RS+N    G + +    FF     L    
Sbjct: 638  FLMKHKDEAQPLIKHFFSYVSTQFASHIKIFRSDN----GGEFLSLQSFFKDNGVLFQHS 693

Query: 830  LV*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRSFANNNLFDQYLSI*SSGIVPL 651
             V  P       + N ++  +        HI   +    F    L  Q+    +   V +
Sbjct: 694  CVYTP-------QQNGVVERKH------RHILQVARALKF-QAQLPTQFWGECALTAVHI 739

Query: 650  INSLEKLLIILK-PGRSLYFVSILSAHM---------------DKLAPRAIPCVFLGFSF 519
            IN L   ++  K P   LY      +H+                K   RAI C+F+G+  
Sbjct: 740  INRLPSPVLSFKTPFERLYLKPPTYSHLRVFGCLAYATNVHVSHKFDHRAIACIFIGYPV 799

Query: 518  RKKGYKVLSLKTRELLISRNVKFFESIF---SFTKTFPMSQL 402
             +K YK+ +L TR++  SR+V+F E+ F   SF    P S L
Sbjct: 800  GQKAYKLFNLSTRKIFTSRDVRFHENRFPYASFESVLPTSNL 841



 Score = 25.0 bits (53), Expect(2) = 3e-24
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 1285 SNKLWHYRLGHLPLSSAKYI 1226
            S  LWH RLGH+  S   +I
Sbjct: 544  STDLWHSRLGHVSHSRLSFI 563


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  118 bits (295), Expect(2) = 3e-24
 Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 12/264 (4%)
 Frame = -2

Query: 1184 CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWT 1005
            CDI P+A+Q +L F +S I++  PF +IH D  GP++  ++ G +YFLTIVDD TR TW 
Sbjct: 161  CDIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHTRYTWI 220

Query: 1004 FLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL*TKPL- 828
             L+S KS    IL+SF+++V+ QF++ IK +R++N  E+ S          Q L TK + 
Sbjct: 221  HLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISS--------MKQYLDTKGIN 272

Query: 827  ------V*PPYNRMGWLRGNTIISLRSVRLYYINHIFLPSIGRS-----FANNNLFDQYL 681
                    P  N +   +   ++++     +  N + L   G S     +  N L    L
Sbjct: 273  YHHSCAYTPQQNGVVERKHRHLLNVGRALRFQAN-LPLKFWGESIQTACYLINRLPTPLL 331

Query: 680  SI*SSGIVPLINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRKKGYK 501
            S   S    L N L     +   G   Y  ++L  H  K   RA  C+F+G+   +KGY+
Sbjct: 332  SH-KSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTH--KFDQRARRCIFVGYPLGQKGYR 388

Query: 500  VLSLKTRELLISRNVKFFESIFSF 429
            V  L+T +   S +V F E IF F
Sbjct: 389  VYDLETNKFFSSXDVVFHEHIFPF 412



 Score = 21.9 bits (45), Expect(2) = 3e-24
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1276 LWHYRLGH 1253
            LWH RLGH
Sbjct: 130  LWHQRLGH 137


>ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244259 [Solanum
            lycopersicum]
          Length = 1812

 Score =  117 bits (294), Expect(2) = 4e-24
 Identities = 99/330 (30%), Positives = 152/330 (46%), Gaps = 16/330 (4%)
 Frame = -2

Query: 1184 CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWT 1005
            C+I P+A+Q +LPFTN    +   F ++H+D  GPY TQT+ G KYFLTIVDD +R TW 
Sbjct: 536  CEICPLAKQTRLPFTNIDTRSDRAFALLHLDVWGPYNTQTFDGNKYFLTIVDDYSRITWI 595

Query: 1004 FLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL*TKPLV 825
            FL+  K +V  +LK F   V  QF+  ++ IR++N  E  +  +       Q L  K L 
Sbjct: 596  FLLKFKHDVLIVLKQFFQLVHTQFNASVQGIRTDNGGEFCNDQL-------QAL-LKDLG 647

Query: 824  *PPYNRMGWLRGNTIISLR----------------SVRLYYINHIFLPSIGRSFANNNLF 693
               Y    +      ++ R                 V L +  H  L ++   +  N L 
Sbjct: 648  IVHYRTCAYTPQQNGVAERKHRHLLEVARALRFQSGVPLKFWGHCILTAV---YIINRLP 704

Query: 692  DQYLSI*SSGIVPLINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRK 513
             + L+        +  +++  LI  +    L + SIL   +DK A RA+  VF+G+S   
Sbjct: 705  SKVLA--GKSPYEVFFNIKPSLIHSRTFGCLCYASIL-PKVDKFAARAVKAVFMGYSGVT 761

Query: 512  KGYKVLSLKTRELLISRNVKFFESIFSFTKTFPMSQLFPGSFQSQ*PIILPSIT*YSITT 333
            KGY +  L+ +   ++R+V F E  F F +    S  F  S  +    I   +  Y IT 
Sbjct: 762  KGYILFDLERQRFFLNRDVVFHEYQFPFKE----SSSFDASITANDAGIDNDVFTYPIT- 816

Query: 332  YFQFYTSFSLTYTLSEFTTSSFTKRSQPAI 243
               + T  S T   +  TTSS T  +  ++
Sbjct: 817  ---YSTPNSPTIYSTPSTTSSHTPSTNDSL 843



 Score = 21.9 bits (45), Expect(2) = 4e-24
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -3

Query: 1309 DTISYFFYSNK----LWHYRLGHLPLSSAKYIKEI 1217
            DT  +  + +K    LWH RL H   SS K +++I
Sbjct: 490  DTKGFTVHDDKRDILLWHRRLAH---SSIKSVQDI 521


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  117 bits (293), Expect(2) = 6e-24
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 14/276 (5%)
 Frame = -2

Query: 1211 QRSHKNDFSCDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIV 1032
            +R+ ++   C I   A+Q  L F +    +++ F +IHIDT GP+ T T  G KYFLTIV
Sbjct: 609  KRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIV 668

Query: 1031 DDCTRTTWTFLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFS 852
            DD +R TW +L+  K++V  I   FL  V+ Q+   +K +RS+NA EL          F 
Sbjct: 669  DDYSRATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPELR---------FE 719

Query: 851  QKL*TKPLV-------*PPYNRMGWLRGNTIISLRSVRLYYINHIFLP-------SIGRS 714
                 K ++        P  N +   +   I+++    ++  N   +P        +   
Sbjct: 720  ALYQAKGIISYHSCPETPQQNSVVERKHQHILNVARALMFEAN---MPLEFWGDCILSAV 776

Query: 713  FANNNLFDQYLSI*SSGIVPLINSLEKLLIILKPGRSLYFVSILSAHMDKLAPRAIPCVF 534
            F  N L    LS  +     L++        LK    L + S       K APRA  CVF
Sbjct: 777  FLINRLPTPLLS--NKSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVF 834

Query: 533  LGFSFRKKGYKVLSLKTRELLISRNVKFFESIFSFT 426
            LG+    KGYK+L L+T  + ISR+V F+E++F FT
Sbjct: 835  LGYPSGYKGYKLLDLETNTIHISRHVVFYETVFPFT 870



 Score = 21.6 bits (44), Expect(2) = 6e-24
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1276 LWHYRLGH 1253
            LWH RLGH
Sbjct: 585  LWHSRLGH 592


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  116 bits (290), Expect(2) = 8e-24
 Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
 Frame = -2

Query: 1178 IFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWTFL 999
            I P+A+Q +L F       ++ F +IH D  GP+KT T+ G  Y  TIVDD +R TW +L
Sbjct: 405  ICPLAKQRRLSFPILNNIAENVFELIHCDIWGPFKTPTHAGHSYSATIVDDKSRYTWVYL 464

Query: 998  ISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNIPTDFFFSQKL*TKPLV*P 819
            +  KS++  ++  F   ++ QFSK IKV RS+NA EL  ++          L  K     
Sbjct: 465  LKHKSDILQVIPRFFKLIETQFSKVIKVFRSDNAPELNFRD----------LFAKTGTTH 514

Query: 818  PYNRMGWLRGNTIISLRSVRLYYINH--IFLPSIGRSFANNNLFDQYLSI*SSGIVPLIN 645
             ++     + N+++  +   L  +    +F   +   F    +      I  + +V L N
Sbjct: 515  QFSCAYTPQQNSVVERKHQHLLNVARALMFQSKVPLIFWGECVLSAAYLINRTPMVLLSN 574

Query: 644  SLEKLLI--------ILKPGRSLYFVSILSAHMDKLAPRAIPCVFLGFSFRKKGYKVLSL 489
            +     +        I+K    L + S  S +  K  PRA PCVF+GF    KGY++  +
Sbjct: 575  NTPFAALFKKKADYNIIKTFGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRLYDI 634

Query: 488  KTRELLISRNVKFFESIFSF----TKTFPMSQLFPGSF 387
              R+  ISR+V FFE +F F     K  P+S  F   F
Sbjct: 635  AKRKFFISRDVLFFEELFPFHSIKEKDIPISHDFLEQF 672



 Score = 22.3 bits (46), Expect(2) = 8e-24
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 1276 LWHYRLGHLPLSSAKYIKEI 1217
            +WH R+GH  +S  K + ++
Sbjct: 371  MWHKRMGHPSISRIKELAKM 390



 Score = 92.8 bits (229), Expect(3) = 1e-20
 Identities = 44/104 (42%), Positives = 65/104 (62%)
 Frame = -2

Query: 1184 CDIFPMARQCKLPFTNSQITTKDPFHIIHIDTCGPYKTQTYIGEKYFLTIVDDCTRTTWT 1005
            C I P+A+Q +L F       ++ F +IH D  GP+KT T+ G  YF TIVDD +R TW 
Sbjct: 1828 CHICPLAKQRRLSFPILNNIAENIFDLIHCDIWGPFKTPTHAGHSYFATIVDDKSRYTWV 1887

Query: 1004 FLISTKSNVFTILKSFLAYVDRQFSKKIKVIRSNNAYELGSKNI 873
            +L+  KS++  ++  F   ++ QFSK IKV RS+NA EL  +++
Sbjct: 1888 YLLKHKSDILQVIPRFFKLIETQFSKVIKVFRSDNAPELNFRDL 1931



 Score = 32.0 bits (71), Expect(3) = 1e-20
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 852  TEIINQTTCVATLQQNGMAERKHNHLL 772
            T   +Q +C  T QQN + ERKH HLL
Sbjct: 1935 TGTTHQFSCAYTPQQNSVVERKHQHLL 1961



 Score = 23.1 bits (48), Expect(3) = 1e-20
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 1285 SNKLWHYRLGHLPLSSAKYIKEI 1217
            S  +WH R+GH  +S  K + ++
Sbjct: 1793 SASMWHKRMGHPSISRIKELAKM 1815