BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041508
         (579 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    94   2e-17
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    87   2e-15
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    76   1e-12
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    76   7e-12
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    73   2e-11
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    62   1e-07
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    56   4e-06

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 93.6 bits (231), Expect(2) = 2e-17
 Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
 Frame = -1

Query: 498  KWDRILIETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLADHL 319
            K  +++IETDSL L+KIIQ+TW VPW+I   +EEI +IM     +I+HI+REGN LAD L
Sbjct: 768  KMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSL 827

Query: 318  ANQAL-NIGTIEANIFQDLDYQDRKILNNDKLLEPYLRIK 202
            AN A+ +    + + FQ+L  ++R+ILN DK   P LRI+
Sbjct: 828  ANIAIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRIR 867



 Score = 21.6 bits (44), Expect(2) = 2e-17
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 562 STNTQAEAFAILYALR 515
           +TN +AE  AIL ALR
Sbjct: 747 ATNMEAETVAILTALR 762


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -1

Query: 480 IETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLADHLANQA-L 304
           +ETDS +L KI+ R WEVPW IV  +E+IW + +   V+I H+YREGN LAD+LAN A  
Sbjct: 233 LETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFF 292

Query: 303 NIGTIEANIFQDLDYQDRKILNNDKLLEPYLRIK 202
           N   I  N F +L  Q +KI+N DK   P ++I+
Sbjct: 293 NPNIIVYNSFAELPSQAKKIVNLDKQQLPNIKIR 326


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 198

 Score = 76.3 bits (186), Expect(2) = 1e-12
 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -1

Query: 498 KWDRILIETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLADHL 319
           K  +I++E+DSLL+ KII   W+V W I    +E+ + M    V+  HIYREGNKLAD+L
Sbjct: 87  KMRKIILESDSLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHIYREGNKLADYL 146

Query: 318 ANQALNIGTIEA-NIFQDLDYQDRKILNNDKLLEPYLRIK 202
           AN A+N    +  + FQ L    RKI+N +K   P LR +
Sbjct: 147 ANLAINSTEKKTFSSFQQLPSLGRKIINMEKAQIPSLRCR 186



 Score = 22.7 bits (47), Expect(2) = 1e-12
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 562 STNTQAEAFAILYALRY 512
           +TN +AE  AIL A+RY
Sbjct: 66  TTNVEAEMRAILEAIRY 82


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = -1

Query: 489  RILIETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLADHLANQ 310
            ++ +ETDSL LQ +I R+W++PW++V  +EEI +IM+   V++ H+YRE N+LAD +AN 
Sbjct: 742  KVRLETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANT 801

Query: 309  ALNIGTIEA-NIFQDLDYQDRKILNNDKLLEPYLRIKPCK 193
             +N    +  + F  L    +K+LN DK  E  L + P K
Sbjct: 802  TINTEHKKVFHHFHQLPSLGKKLLNIDKHQE-LLLLGPAK 840


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 72.8 bits (177), Expect(2) = 2e-11
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = -1

Query: 495 WDRILIETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLADHLA 316
           + R+ IETDSLLL+ I+Q  WE+PW I   +E+   +M+   V I HIYREGN LAD+LA
Sbjct: 803 FSRVTIETDSLLLKNILQGNWEIPWNIRIIVEDTLTLMQYSTVNIEHIYREGNTLADYLA 862

Query: 315 NQA 307
           N A
Sbjct: 863 NYA 865



 Score = 21.9 bits (45), Expect(2) = 2e-11
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 574 EDPHSTNTQAEAFAILYAL 518
           E P +TN +AEA AI  A+
Sbjct: 777 EIPETTNVEAEAVAIKEAI 795


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 41/58 (70%)
 Frame = -1

Query: 486 ILIETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLADHLAN 313
           +++ETDSL++ KI+   WE PW I   +++I  + R   VE+SH++REGNK+ ++ AN
Sbjct: 203 VILETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFAN 260


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 143

 Score = 56.2 bits (134), Expect(2) = 4e-06
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = -1

Query: 495 WDRILIETDSLLLQKIIQRTWEVPWQIVSCMEEIWKIMRGRIVEISHIYREGNKLA 328
           + ++ +ETDSL L+ I+ R W+ PW++V  +E+I +IM    V I HI+RE N+LA
Sbjct: 88  FQQVSLETDSLTLKNILVRNWKTPWELVERVEDILEIMSHMDVTIKHIFREVNQLA 143



 Score = 20.4 bits (41), Expect(2) = 4e-06
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 562 STNTQAEAFAILYALRY 512
           +TN  AE+ AI  AL+Y
Sbjct: 66  TTNMDAESMAIWKALQY 82